RNA–Protein interactions for RNA: ENST00000439160.6

TCOF1-205, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-205ENST00000439160 RAB40ALP0C0E4 278 aa11.22□□□□□ -0.61
TCOF1-205ENST00000439160 MRPS10P82664 201 aaKnown RBP11.22□□□□□ -0.61
TCOF1-205ENST00000439160 PLCXD3Q63HM9 321 aa11.22□□□□□ -0.61
TCOF1-205ENST00000439160 RAB12Q6IQ22 244 aa11.22□□□□□ -0.61
TCOF1-205ENST00000439160 C16orf47Q6ZP98 133 aaPredicted RBP11.22□□□□□ -0.61
TCOF1-205ENST00000439160 CCDC28AQ8IWP9 274 aa11.22□□□□□ -0.61
TCOF1-205ENST00000439160 GPR119Q8TDV5 335 aa11.22□□□□□ -0.61
TCOF1-205ENST00000439160 RAB40AQ8WXH6 277 aa11.22□□□□□ -0.61
TCOF1-205ENST00000439160 MIB2Q96AX9 1013 aa11.22□□□□□ -0.61
TCOF1-205ENST00000439160 DPCDQ9BVM2 203 aaPredicted RBP11.22□□□□□ -0.61
TCOF1-205ENST00000439160 GALNT9Q9HCQ5 603 aa11.22□□□□□ -0.61
TCOF1-205ENST00000439160 OSGIN1Q9UJX0 560 aa11.22□□□□□ -0.61
TCOF1-205ENST00000439160 WASF3Q9UPY6 502 aa11.22□□□□□ -0.61
TCOF1-205ENST00000439160 SLC22A5O76082 557 aa11.22□□□□□ -0.61
TCOF1-205ENST00000439160 SOX18P35713 384 aa11.22□□□□□ -0.61
TCOF1-205ENST00000439160 RFC3P40938 356 aa11.22□□□□□ -0.61
TCOF1-205ENST00000439160 DIO1P49895 249 aa11.22□□□□□ -0.61
TCOF1-205ENST00000439160 ZNF628Q5EBL2 1059 aa11.22□□□□□ -0.61
TCOF1-205ENST00000439160 FGGYQ96C11 551 aa11.22□□□□□ -0.61
TCOF1-205ENST00000439160 FOXRED1Q96CU9 486 aaPredicted RBP11.22□□□□□ -0.61
TCOF1-205ENST00000439160 SLC25A19Q9HC21 320 aa11.22□□□□□ -0.61
TCOF1-205ENST00000439160 MAB21L2Q9Y586 359 aa11.22□□□□□ -0.61
TCOF1-205ENST00000439160 ALG5Q9Y673 324 aa11.22□□□□□ -0.61
TCOF1-205ENST00000439160 OR6C76A6NM76 312 aa11.21□□□□□ -0.61
TCOF1-205ENST00000439160 H7C417 338 aa11.21□□□□□ -0.61
TCOF1-205ENST00000439160 ERP29P30040 261 aaKnown RBP11.21□□□□□ -0.61
TCOF1-205ENST00000439160 PRICKLE4Q2TBC4 344 aa11.21□□□□□ -0.61
TCOF1-205ENST00000439160 APOOLQ6UXV4 268 aa11.21□□□□□ -0.61
TCOF1-205ENST00000439160 USP51Q70EK9 711 aa11.21□□□□□ -0.61
TCOF1-205ENST00000439160 RDH10Q8IZV5 341 aa11.21□□□□□ -0.61
TCOF1-205ENST00000439160 OR1N1Q8NGS0 311 aa11.21□□□□□ -0.61
TCOF1-205ENST00000439160 COQ8AQ8NI60 647 aa11.21□□□□□ -0.61
TCOF1-205ENST00000439160 SORCS2Q96PQ0 1159 aa11.21□□□□□ -0.61
TCOF1-205ENST00000439160 EDEM2Q9BV94 578 aa11.21□□□□□ -0.61
TCOF1-205ENST00000439160 PAPOLGQ9BWT3 736 aaKnown RBP11.21□□□□□ -0.61
TCOF1-205ENST00000439160 PPIL3Q9H2H8 161 aaKnown RBP11.21□□□□□ -0.61
TCOF1-205ENST00000439160 SIAEQ9HAT2 523 aa11.21□□□□□ -0.61
TCOF1-205ENST00000439160 EMC7Q9NPA0 242 aa11.21□□□□□ -0.61
TCOF1-205ENST00000439160 C20orf141Q9NUB4 165 aa11.21□□□□□ -0.61
TCOF1-205ENST00000439160 UBE2J1Q9Y385 318 aaPredicted RBP11.21□□□□□ -0.61
TCOF1-205ENST00000439160 PCYT1BQ9Y5K3 369 aaPredicted RBP11.21□□□□□ -0.61
TCOF1-205ENST00000439160 TRBV5-3A0A0A0MS03 114 aa11.21□□□□□ -0.61
TCOF1-205ENST00000439160 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.21□□□□□ -0.61
TCOF1-205ENST00000439160 ANKRD30BLA7E2S9 258 aa11.21□□□□□ -0.61
TCOF1-205ENST00000439160 LILRB5O75023 590 aa11.21□□□□□ -0.61
TCOF1-205ENST00000439160 AKAIN1P0CW23 69 aa11.21□□□□□ -0.61
TCOF1-205ENST00000439160 HTR2CP28335 458 aa11.21□□□□□ -0.61
TCOF1-205ENST00000439160 MOB3CQ70IA8 216 aa11.21□□□□□ -0.61
TCOF1-205ENST00000439160 DCBLD2Q96PD2 775 aa11.21□□□□□ -0.61
TCOF1-205ENST00000439160 OR51J1Q9H342 316 aa11.21□□□□□ -0.61
TCOF1-205ENST00000439160 FKRPQ9H9S5 495 aa11.21□□□□□ -0.61
TCOF1-205ENST00000439160 CHST11Q9NPF2 352 aa11.21□□□□□ -0.61
TCOF1-205ENST00000439160 REV1Q9UBZ9 1251 aa11.21□□□□□ -0.61
TCOF1-205ENST00000439160 CHST2Q9Y4C5 530 aa11.21□□□□□ -0.61
TCOF1-205ENST00000439160 WDR90Q96KV7 1748 aa11.21□□□□□ -0.61
TCOF1-205ENST00000439160 DVL2O14641 736 aa11.21□□□□□ -0.62
TCOF1-205ENST00000439160 RP2O75695 350 aa11.21□□□□□ -0.62
TCOF1-205ENST00000439160 SRMP19623 302 aa11.21□□□□□ -0.62
TCOF1-205ENST00000439160 IL32P24001 234 aa11.21□□□□□ -0.62
TCOF1-205ENST00000439160 FCARP24071 287 aa11.21□□□□□ -0.62
TCOF1-205ENST00000439160 MTCP1P56278 107 aa11.21□□□□□ -0.62
TCOF1-205ENST00000439160 PLEKHN1Q494U1 663 aaPredicted RBP11.21□□□□□ -0.62
TCOF1-205ENST00000439160 YIF1BQ5BJH7 314 aa11.21□□□□□ -0.62
TCOF1-205ENST00000439160 GLYATL3Q5SZD4 288 aa11.21□□□□□ -0.62
TCOF1-205ENST00000439160 ARHGDIGQ99819 225 aa11.21□□□□□ -0.62
TCOF1-205ENST00000439160 LIN7BQ9HAP6 207 aa11.21□□□□□ -0.62
TCOF1-205ENST00000439160 LRFN1Q9P244 771 aa11.21□□□□□ -0.62
TCOF1-205ENST00000439160 TMEM184BQ9Y519 407 aaPredicted RBP11.21□□□□□ -0.62
TCOF1-205ENST00000439160 NUBP2Q9Y5Y2 271 aa11.21□□□□□ -0.62
TCOF1-205ENST00000439160 TDRD6O60522 2096 aaKnown RBP11.21□□□□□ -0.62
TCOF1-205ENST00000439160 NAP1L6A6NFF2 107 aa11.21□□□□□ -0.62
TCOF1-205ENST00000439160 HMX3A6NHT5 357 aa11.21□□□□□ -0.62
TCOF1-205ENST00000439160 ARGFXA6NJG6 315 aa11.21□□□□□ -0.62
TCOF1-205ENST00000439160 KLRC4-KLRK1H3BQV0 150 aa11.21□□□□□ -0.62
TCOF1-205ENST00000439160 ABCD3P28288 659 aa11.21□□□□□ -0.62
TCOF1-205ENST00000439160 EPHA8P29322 1005 aaPredicted RBP11.21□□□□□ -0.62
TCOF1-205ENST00000439160 BDKRB2P30411 391 aa11.21□□□□□ -0.62
TCOF1-205ENST00000439160 VEGFCP49767 419 aa11.21□□□□□ -0.62
TCOF1-205ENST00000439160 HNRNPFP52597 415 aaKnown RBP11.21□□□□□ -0.62
TCOF1-205ENST00000439160 PCBP3P57721 371 aaKnown RBP11.21□□□□□ -0.62
TCOF1-205ENST00000439160 PSPHP78330 225 aa11.21□□□□□ -0.62
TCOF1-205ENST00000439160 DEFA5Q01523 94 aa11.21□□□□□ -0.62
TCOF1-205ENST00000439160 OR13C5Q8NGS8 318 aa11.21□□□□□ -0.62
TCOF1-205ENST00000439160 DEDD2Q8WXF8 326 aa11.21□□□□□ -0.62
TCOF1-205ENST00000439160 OPALINQ96PE5 141 aa11.21□□□□□ -0.62
TCOF1-205ENST00000439160 CDC6Q99741 560 aa11.21□□□□□ -0.62
TCOF1-205ENST00000439160 ASH2LQ9UBL3 628 aa11.21□□□□□ -0.62
TCOF1-205ENST00000439160 OR52A1Q9UKL2 312 aa11.21□□□□□ -0.62
TCOF1-205ENST00000439160 MGAT4AQ9UM21 535 aa11.21□□□□□ -0.62
TCOF1-205ENST00000439160 C1QCP02747 245 aa11.2□□□□□ -0.62
TCOF1-205ENST00000439160 GCH1P30793 250 aa11.2□□□□□ -0.62
TCOF1-205ENST00000439160 MPLP40238 635 aa11.2□□□□□ -0.62
TCOF1-205ENST00000439160 FGFBP1Q14512 234 aa11.2□□□□□ -0.62
TCOF1-205ENST00000439160 METTL11BQ5VVY1 283 aa11.2□□□□□ -0.62
TCOF1-205ENST00000439160 HYLS1Q96M11 299 aa11.2□□□□□ -0.62
TCOF1-205ENST00000439160 SLC19A3Q9BZV2 496 aa11.2□□□□□ -0.62
TCOF1-205ENST00000439160 LOC285556D6RIA3 1793 aa11.2□□□□□ -0.62
TCOF1-205ENST00000439160 GOSR2O14653 212 aa11.2□□□□□ -0.62
TCOF1-205ENST00000439160 TNFSF15O95150 251 aa11.2□□□□□ -0.62
TCOF1-205ENST00000439160 GDNFP39905 211 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms