RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 TMEM179BQ7Z7N9 219 aa2.69□□□□□ -1.98
LSM1P1-201ENST00000438629 SCD5Q86SK9 330 aa2.69□□□□□ -1.98
LSM1P1-201ENST00000438629 CYP4Z1Q86W10 505 aa2.69□□□□□ -1.98
LSM1P1-201ENST00000438629 MFSD6LQ8IWD5 586 aa2.69□□□□□ -1.98
LSM1P1-201ENST00000438629 LRRC8AQ8IWT6 810 aa2.69□□□□□ -1.98
LSM1P1-201ENST00000438629 SELENOHQ8IZQ5 122 aaKnown RBP2.69□□□□□ -1.98
LSM1P1-201ENST00000438629 DHRSXQ8N5I4 330 aa2.69□□□□□ -1.98
LSM1P1-201ENST00000438629 OR7G1Q8NGA0 311 aa2.69□□□□□ -1.98
LSM1P1-201ENST00000438629 OR1F12Q8NHA8 337 aa2.69□□□□□ -1.98
LSM1P1-201ENST00000438629 CNIH3Q8TBE1 160 aa2.69□□□□□ -1.98
LSM1P1-201ENST00000438629 SETD7Q8WTS6 366 aaKnown RBP2.69□□□□□ -1.98
LSM1P1-201ENST00000438629 ST8SIA1Q92185 356 aa2.69□□□□□ -1.98
LSM1P1-201ENST00000438629 FAM3CQ92520 227 aa2.69□□□□□ -1.98
LSM1P1-201ENST00000438629 ELMO1Q92556 727 aa2.69□□□□□ -1.98
LSM1P1-201ENST00000438629 RAB1CQ92928 201 aa2.69□□□□□ -1.98
LSM1P1-201ENST00000438629 TOP1MTQ969P6 601 aa2.69□□□□□ -1.98
LSM1P1-201ENST00000438629 NUS1Q96E22 293 aa2.69□□□□□ -1.98
LSM1P1-201ENST00000438629 C16orf74Q96GX8 76 aa2.69□□□□□ -1.98
LSM1P1-201ENST00000438629 PPP1R36Q96LQ0 422 aa2.69□□□□□ -1.98
LSM1P1-201ENST00000438629 CCDC42Q96M95 316 aa2.69□□□□□ -1.98
LSM1P1-201ENST00000438629 ZIM3Q96PE6 472 aa2.69□□□□□ -1.98
LSM1P1-201ENST00000438629 NICN1Q9BSH3 213 aa2.69□□□□□ -1.98
LSM1P1-201ENST00000438629 ANKRD60Q9BZ19 345 aa2.69□□□□□ -1.98
LSM1P1-201ENST00000438629 PRRG3Q9BZD7 231 aa2.69□□□□□ -1.98
LSM1P1-201ENST00000438629 DERL2Q9GZP9 239 aa2.69□□□□□ -1.98
LSM1P1-201ENST00000438629 NXF5Q9H1B4 397 aaKnown RBP2.69□□□□□ -1.98
LSM1P1-201ENST00000438629 PTGES2Q9H7Z7 377 aa2.69□□□□□ -1.98
LSM1P1-201ENST00000438629 MRPS30Q9NP92 439 aaKnown RBP2.69□□□□□ -1.98
LSM1P1-201ENST00000438629 LYARQ9NX58 379 aaKnown RBP2.69□□□□□ -1.98
LSM1P1-201ENST00000438629 PISDQ9UG56 409 aa2.69□□□□□ -1.98
LSM1P1-201ENST00000438629 ANAPC7Q9UJX3 599 aa2.69□□□□□ -1.98
LSM1P1-201ENST00000438629 NUP50Q9UKX7 468 aa2.69□□□□□ -1.98
LSM1P1-201ENST00000438629 TBC1D24Q9ULP9 559 aa2.69□□□□□ -1.98
LSM1P1-201ENST00000438629 AP3M1Q9Y2T2 418 aa2.69□□□□□ -1.98
LSM1P1-201ENST00000438629 ALG6Q9Y672 507 aa2.69□□□□□ -1.98
LSM1P1-201ENST00000438629 PLB1Q6P1J6 1458 aa2.69□□□□□ -1.98
LSM1P1-201ENST00000438629 ARHGAP23Q9P227 1491 aa2.69□□□□□ -1.98
LSM1P1-201ENST00000438629 FHOD3Q2V2M9 1422 aa2.68□□□□□ -1.98
LSM1P1-201ENST00000438629 RAI1Q7Z5J4 1906 aaPredicted RBP2.68□□□□□ -1.98
LSM1P1-201ENST00000438629 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.68□□□□□ -1.98
LSM1P1-201ENST00000438629 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.68□□□□□ -1.98
LSM1P1-201ENST00000438629 GSTTP1A0A1W2PQM5 241 aa2.68□□□□□ -1.98
LSM1P1-201ENST00000438629 PDZK1P1A8MUH7 402 aa2.68□□□□□ -1.98
LSM1P1-201ENST00000438629 BIRC5O15392 142 aa2.68□□□□□ -1.98
LSM1P1-201ENST00000438629 DENRO43583 198 aaKnown RBP2.68□□□□□ -1.98
LSM1P1-201ENST00000438629 STX10O60499 249 aa2.68□□□□□ -1.98
LSM1P1-201ENST00000438629 SCN2BO60939 215 aa2.68□□□□□ -1.98
LSM1P1-201ENST00000438629 OR2F2O95006 317 aa2.68□□□□□ -1.98
LSM1P1-201ENST00000438629 RAB3DO95716 219 aa2.68□□□□□ -1.98
LSM1P1-201ENST00000438629 CST1P01037 141 aa2.68□□□□□ -1.98
LSM1P1-201ENST00000438629 CD3GP09693 182 aa2.68□□□□□ -1.98
LSM1P1-201ENST00000438629 DUX4L4P0CJ87 422 aa2.68□□□□□ -1.98
LSM1P1-201ENST00000438629 PGCP20142 388 aa2.68□□□□□ -1.98
LSM1P1-201ENST00000438629 RAB4AP20338 218 aa2.68□□□□□ -1.98
LSM1P1-201ENST00000438629 VDAC1P21796 283 aa2.68□□□□□ -1.98
LSM1P1-201ENST00000438629 CCNOP22674 350 aa2.68□□□□□ -1.98
LSM1P1-201ENST00000438629 GABRR1P24046 479 aa2.68□□□□□ -1.98
LSM1P1-201ENST00000438629 CD1CP29017 333 aa2.68□□□□□ -1.98
LSM1P1-201ENST00000438629 GTF2E2P29084 291 aaKnown RBP2.68□□□□□ -1.98
LSM1P1-201ENST00000438629 CRABP2P29373 138 aa2.68□□□□□ -1.98
LSM1P1-201ENST00000438629 GTF2H1P32780 548 aa2.68□□□□□ -1.98
LSM1P1-201ENST00000438629 SLC26A3P40879 764 aa2.68□□□□□ -1.98
LSM1P1-201ENST00000438629 CDKN2CP42773 168 aa2.68□□□□□ -1.98
LSM1P1-201ENST00000438629 CDC34P49427 236 aaPredicted RBP2.68□□□□□ -1.98
LSM1P1-201ENST00000438629 CSNK1EP49674 416 aaKnown RBP2.68□□□□□ -1.98
LSM1P1-201ENST00000438629 CCNG1P51959 295 aa2.68□□□□□ -1.98
LSM1P1-201ENST00000438629 EFNB2P52799 333 aa2.68□□□□□ -1.98
LSM1P1-201ENST00000438629 PLK1P53350 603 aa2.68□□□□□ -1.98
LSM1P1-201ENST00000438629 ACLYP53396 1101 aa2.68□□□□□ -1.98
LSM1P1-201ENST00000438629 ATP1B3P54709 279 aa2.68□□□□□ -1.98
LSM1P1-201ENST00000438629 TNNC1P63316 161 aa2.68□□□□□ -1.98
LSM1P1-201ENST00000438629 ZNF45Q02386 682 aa2.68□□□□□ -1.98
LSM1P1-201ENST00000438629 SLC10A7Q0GE19 358 aa2.68□□□□□ -1.98
LSM1P1-201ENST00000438629 NAB1Q13506 487 aa2.68□□□□□ -1.98
LSM1P1-201ENST00000438629 CHI3L2Q15782 390 aa2.68□□□□□ -1.98
LSM1P1-201ENST00000438629 VPS26BQ4G0F5 336 aa2.68□□□□□ -1.98
LSM1P1-201ENST00000438629 TMIGD1Q6UXZ0 262 aa2.68□□□□□ -1.98
LSM1P1-201ENST00000438629 COPS6Q7L5N1 327 aa2.68□□□□□ -1.98
LSM1P1-201ENST00000438629 HSD17B13Q7Z5P4 300 aaPredicted RBP2.68□□□□□ -1.98
LSM1P1-201ENST00000438629 C17orf82Q86X59 251 aaPredicted RBP2.68□□□□□ -1.98
LSM1P1-201ENST00000438629 ZNF100Q8IYN0 542 aa2.68□□□□□ -1.98
LSM1P1-201ENST00000438629 IQCKQ8N0W5 287 aa2.68□□□□□ -1.98
LSM1P1-201ENST00000438629 ARHGAP18Q8N392 663 aa2.68□□□□□ -1.98
LSM1P1-201ENST00000438629 MTURNQ8N3F0 131 aa2.68□□□□□ -1.98
LSM1P1-201ENST00000438629 ALLCQ8N6M5 410 aa2.68□□□□□ -1.98
LSM1P1-201ENST00000438629 FAM86B1Q8N7N1 296 aa2.68□□□□□ -1.98
LSM1P1-201ENST00000438629 MFSD9Q8NBP5 474 aa2.68□□□□□ -1.98
LSM1P1-201ENST00000438629 OR2T33Q8NG76 320 aa2.68□□□□□ -1.98
LSM1P1-201ENST00000438629 OR4K14Q8NGD5 310 aa2.68□□□□□ -1.98
LSM1P1-201ENST00000438629 OR8K1Q8NGG5 319 aa2.68□□□□□ -1.98
LSM1P1-201ENST00000438629 OR5M1Q8NGP8 315 aa2.68□□□□□ -1.98
LSM1P1-201ENST00000438629 OR10Z1Q8NGY1 313 aa2.68□□□□□ -1.98
LSM1P1-201ENST00000438629 HTR3CQ8WXA8 447 aa2.68□□□□□ -1.98
LSM1P1-201ENST00000438629 ARNTL2Q8WYA1 636 aa2.68□□□□□ -1.98
LSM1P1-201ENST00000438629 NEIL2Q969S2 332 aa2.68□□□□□ -1.98
LSM1P1-201ENST00000438629 OTUB2Q96DC9 234 aa2.68□□□□□ -1.98
LSM1P1-201ENST00000438629 PELI1Q96FA3 418 aa2.68□□□□□ -1.98
LSM1P1-201ENST00000438629 DUS3LQ96G46 650 aaKnown RBP2.68□□□□□ -1.98
LSM1P1-201ENST00000438629 PLEKHA8Q96JA3 519 aa2.68□□□□□ -1.98
LSM1P1-201ENST00000438629 CEP170P1Q96L14 293 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms