RNA–Protein interactions for RNA: ENST00000437036.6

SKA2-202, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 625 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-202ENST00000437036 CASQ2O14958 399 aaPredicted RBP12.97□□□□□ -0.33
SKA2-202ENST00000437036 MITFO75030 526 aaPredicted RBP12.97□□□□□ -0.33
SKA2-202ENST00000437036 HIST1H1CP16403 213 aaKnown RBP12.97□□□□□ -0.33
SKA2-202ENST00000437036 COX5AP20674 150 aa12.97□□□□□ -0.33
SKA2-202ENST00000437036 IGHV1-2P23083 117 aa12.97□□□□□ -0.33
SKA2-202ENST00000437036 GUCA1AP43080 201 aaPredicted RBP12.97□□□□□ -0.33
SKA2-202ENST00000437036 CDK5Q00535 292 aa12.97□□□□□ -0.33
SKA2-202ENST00000437036 SORDQ00796 357 aa12.97□□□□□ -0.33
SKA2-202ENST00000437036 TFF3Q07654 80 aa12.97□□□□□ -0.33
SKA2-202ENST00000437036 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.97□□□□□ -0.33
SKA2-202ENST00000437036 LGALS3BPQ08380 585 aa12.97□□□□□ -0.33
SKA2-202ENST00000437036 FAM27E3Q08E93 113 aa12.97□□□□□ -0.33
SKA2-202ENST00000437036 HIST3H3Q16695 136 aa12.97□□□□□ -0.33
SKA2-202ENST00000437036 LRRC36Q1X8D7 754 aa12.97□□□□□ -0.33
SKA2-202ENST00000437036 MESTQ5EB52 335 aa12.97□□□□□ -0.33
SKA2-202ENST00000437036 SLC35F1Q5T1Q4 408 aa12.97□□□□□ -0.33
SKA2-202ENST00000437036 OR7E24Q6IFN5 339 aa12.97□□□□□ -0.33
SKA2-202ENST00000437036 LEG1Q6P5S2 330 aa12.97□□□□□ -0.33
SKA2-202ENST00000437036 DNM1P34Q6PK57 102 aa12.97□□□□□ -0.33
SKA2-202ENST00000437036 BHLHA15Q7RTS1 189 aaPredicted RBP12.97□□□□□ -0.33
SKA2-202ENST00000437036 PACRGLQ8N7B6 248 aa12.97□□□□□ -0.33
SKA2-202ENST00000437036 C1orf162Q8NEQ5 155 aaPredicted RBP12.97□□□□□ -0.33
SKA2-202ENST00000437036 OR52E2Q8NGJ4 325 aa12.97□□□□□ -0.33
SKA2-202ENST00000437036 OR4Q3Q8NH05 313 aa12.97□□□□□ -0.33
SKA2-202ENST00000437036 OR4K13Q8NH42 304 aa12.97□□□□□ -0.33
SKA2-202ENST00000437036 MCHR2Q969V1 340 aa12.97□□□□□ -0.33
SKA2-202ENST00000437036 PLEKHA8Q96JA3 519 aa12.97□□□□□ -0.33
SKA2-202ENST00000437036 SLC38A2Q96QD8 506 aa12.97□□□□□ -0.33
SKA2-202ENST00000437036 OR10A4Q9H209 315 aa12.97□□□□□ -0.33
SKA2-202ENST00000437036 RIBC2Q9H4K1 309 aa12.97□□□□□ -0.33
SKA2-202ENST00000437036 SLC25A19Q9HC21 320 aa12.97□□□□□ -0.33
SKA2-202ENST00000437036 HELZ2Q9BYK8 2649 aaKnown RBP12.97□□□□□ -0.33
SKA2-202ENST00000437036 SLC22A23A1A5C7 686 aa12.96□□□□□ -0.33
SKA2-202ENST00000437036 PRSS44E7EML9 344 aa12.96□□□□□ -0.33
SKA2-202ENST00000437036 DHHO43323 396 aa12.96□□□□□ -0.33
SKA2-202ENST00000437036 LYZL6O75951 148 aa12.96□□□□□ -0.33
SKA2-202ENST00000437036 PPP3CBP16298 524 aa12.96□□□□□ -0.33
SKA2-202ENST00000437036 ZNF3P17036 446 aa12.96□□□□□ -0.33
SKA2-202ENST00000437036 CRABP1P29762 137 aa12.96□□□□□ -0.33
SKA2-202ENST00000437036 HOXC12P31275 282 aa12.96□□□□□ -0.33
SKA2-202ENST00000437036 UGT2B10P36537 528 aa12.96□□□□□ -0.33
SKA2-202ENST00000437036 NPRL3Q12980 569 aa12.96□□□□□ -0.33
SKA2-202ENST00000437036 PTGES3Q15185 160 aaKnown RBP12.96□□□□□ -0.33
SKA2-202ENST00000437036 CEACAM16Q2WEN9 425 aa12.96□□□□□ -0.33
SKA2-202ENST00000437036 PHYHD1Q5SRE7 291 aa12.96□□□□□ -0.33
SKA2-202ENST00000437036 C9orf135Q5VTT2 229 aa12.96□□□□□ -0.33
SKA2-202ENST00000437036 LPCAT4Q643R3 524 aa12.96□□□□□ -0.33
SKA2-202ENST00000437036 LRFN4Q6PJG9 635 aa12.96□□□□□ -0.33
SKA2-202ENST00000437036 STAC2Q6ZMT1 411 aa12.96□□□□□ -0.33
SKA2-202ENST00000437036 WDFY1Q8IWB7 410 aa12.96□□□□□ -0.33
SKA2-202ENST00000437036 IQCF1Q8N6M8 205 aa12.96□□□□□ -0.33
SKA2-202ENST00000437036 ZNF433Q8N7K0 673 aaPredicted RBP12.96□□□□□ -0.33
SKA2-202ENST00000437036 SLC29A1Q99808 456 aa12.96□□□□□ -0.33
SKA2-202ENST00000437036 GABARAPL3Q9BY60 117 aa12.96□□□□□ -0.33
SKA2-202ENST00000437036 VCX3BQ9H321 246 aa12.96□□□□□ -0.33
SKA2-202ENST00000437036 SLC24A3Q9HC58 644 aa12.96□□□□□ -0.33
SKA2-202ENST00000437036 VSX1Q9NZR4 365 aaPredicted RBP12.96□□□□□ -0.33
SKA2-202ENST00000437036 NKX1-2Q9UD57 310 aaPredicted RBP12.96□□□□□ -0.33
SKA2-202ENST00000437036 NDRG3Q9UGV2 375 aa12.96□□□□□ -0.33
SKA2-202ENST00000437036 DOPEY1Q5JWR5 2465 aa12.96□□□□□ -0.34
SKA2-202ENST00000437036 SPTBN1Q01082 2364 aaKnown RBP12.95□□□□□ -0.34
SKA2-202ENST00000437036 ZNF99A8MXY4 864 aaPredicted RBP12.95□□□□□ -0.34
SKA2-202ENST00000437036 H7C1C5 153 aa12.95□□□□□ -0.34
SKA2-202ENST00000437036 ATP6V1G2O95670 118 aa12.95□□□□□ -0.34
SKA2-202ENST00000437036 ITGA5P08648 1049 aa12.95□□□□□ -0.34
SKA2-202ENST00000437036 PAICSP22234 425 aaKnown RBP12.95□□□□□ -0.34
SKA2-202ENST00000437036 PEX2P28328 305 aa12.95□□□□□ -0.34
SKA2-202ENST00000437036 CDKN2AP42771 156 aaKnown RBP12.95□□□□□ -0.34
SKA2-202ENST00000437036 ZNF133P52736 654 aaPredicted RBP12.95□□□□□ -0.34
SKA2-202ENST00000437036 LCN6P62502 163 aa12.95□□□□□ -0.34
SKA2-202ENST00000437036 ARF1P84077 181 aaKnown RBP12.95□□□□□ -0.34
SKA2-202ENST00000437036 C10orf128Q5T292 105 aa12.95□□□□□ -0.34
SKA2-202ENST00000437036 OGFRL1Q5TC84 451 aaPredicted RBP12.95□□□□□ -0.34
SKA2-202ENST00000437036 TMEM236Q5W0B7 351 aa12.95□□□□□ -0.34
SKA2-202ENST00000437036 ACSM5Q6NUN0 579 aa12.95□□□□□ -0.34
SKA2-202ENST00000437036 ANKRD16Q6P6B7 361 aa12.95□□□□□ -0.34
SKA2-202ENST00000437036 PTCHD4Q6ZW05 846 aa12.95□□□□□ -0.34
SKA2-202ENST00000437036 LINGO2Q7L985 606 aa12.95□□□□□ -0.34
SKA2-202ENST00000437036 SSX8Q7RTT4 187 aa12.95□□□□□ -0.34
SKA2-202ENST00000437036 P2RY8Q86VZ1 359 aa12.95□□□□□ -0.34
SKA2-202ENST00000437036 GALNT4Q8N4A0 578 aa12.95□□□□□ -0.34
SKA2-202ENST00000437036 SDR9C7Q8NEX9 313 aa12.95□□□□□ -0.34
SKA2-202ENST00000437036 NSMAFQ92636 917 aa12.95□□□□□ -0.34
SKA2-202ENST00000437036 RDH12Q96NR8 316 aa12.95□□□□□ -0.34
SKA2-202ENST00000437036 NMNAT3Q96T66 252 aa12.95□□□□□ -0.34
SKA2-202ENST00000437036 ACTR6Q9GZN1 396 aa12.95□□□□□ -0.34
SKA2-202ENST00000437036 SYT4Q9H2B2 425 aa12.95□□□□□ -0.34
SKA2-202ENST00000437036 CMC2Q9NRP2 79 aa12.95□□□□□ -0.34
SKA2-202ENST00000437036 ALPK2Q86TB3 2170 aa12.95□□□□□ -0.34
SKA2-202ENST00000437036 USP9XQ93008 2570 aaPredicted RBP12.95□□□□□ -0.34
SKA2-202ENST00000437036 A1L4Q6 167 aa12.94□□□□□ -0.34
SKA2-202ENST00000437036 ZAR1LA6NP61 321 aa12.94□□□□□ -0.34
SKA2-202ENST00000437036 SLC16A7O60669 478 aa12.94□□□□□ -0.34
SKA2-202ENST00000437036 KHDRBS3O75525 346 aaKnown RBP12.94□□□□□ -0.34
SKA2-202ENST00000437036 RAD51DO75771 328 aa12.94□□□□□ -0.34
SKA2-202ENST00000437036 FARS2O95363 451 aaKnown RBP12.94□□□□□ -0.34
SKA2-202ENST00000437036 SLC2A10O95528 541 aa12.94□□□□□ -0.34
SKA2-202ENST00000437036 HOXB1P14653 301 aaPredicted RBP12.94□□□□□ -0.34
SKA2-202ENST00000437036 SNAPC1Q16533 368 aa12.94□□□□□ -0.34
SKA2-202ENST00000437036 ZIK1Q3SY52 487 aaPredicted RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms