RNA–Protein interactions for RNA: ENST00000433972.1

RPUSD3-208, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-208ENST00000433972 DAG1Q14118 895 aa12.89□□□□□ -0.35
RPUSD3-208ENST00000433972 FAM120AOSQ5T036 256 aa12.89□□□□□ -0.35
RPUSD3-208ENST00000433972 LIPNQ5VXI9 398 aa12.89□□□□□ -0.35
RPUSD3-208ENST00000433972 HIST3H2AQ7L7L0 130 aa12.89□□□□□ -0.35
RPUSD3-208ENST00000433972 OR4D11Q8NGI4 311 aa12.89□□□□□ -0.35
RPUSD3-208ENST00000433972 HIST1H2ACQ93077 130 aa12.89□□□□□ -0.35
RPUSD3-208ENST00000433972 TAAR8Q969N4 342 aa12.89□□□□□ -0.35
RPUSD3-208ENST00000433972 NSMCE2Q96MF7 247 aa12.89□□□□□ -0.35
RPUSD3-208ENST00000433972 FNDC11Q9BVV2 318 aa12.89□□□□□ -0.35
RPUSD3-208ENST00000433972 GMPR2Q9P2T1 348 aaKnown RBP12.89□□□□□ -0.35
RPUSD3-208ENST00000433972 HTR3EA5X5Y0 456 aa12.88□□□□□ -0.35
RPUSD3-208ENST00000433972 ZNF726A6NNF4 738 aa12.88□□□□□ -0.35
RPUSD3-208ENST00000433972 TRAF3IP2O43734 574 aaPredicted RBP12.88□□□□□ -0.35
RPUSD3-208ENST00000433972 OR6A2O95222 327 aa12.88□□□□□ -0.35
RPUSD3-208ENST00000433972 TNFRSF1BP20333 461 aa12.88□□□□□ -0.35
RPUSD3-208ENST00000433972 GIFP27352 417 aa12.88□□□□□ -0.35
RPUSD3-208ENST00000433972 THBS4P35443 961 aa12.88□□□□□ -0.35
RPUSD3-208ENST00000433972 RPS23P62266 143 aaKnown RBP12.88□□□□□ -0.35
RPUSD3-208ENST00000433972 HGFACQ04756 655 aa12.88□□□□□ -0.35
RPUSD3-208ENST00000433972 SNTB2Q13425 540 aaKnown RBP12.88□□□□□ -0.35
RPUSD3-208ENST00000433972 PIN1Q13526 163 aaPredicted RBP12.88□□□□□ -0.35
RPUSD3-208ENST00000433972 GSG1Q2KHT4 349 aa12.88□□□□□ -0.35
RPUSD3-208ENST00000433972 LINC00114Q6XXX2 140 aa12.88□□□□□ -0.35
RPUSD3-208ENST00000433972 MDP1Q86V88 176 aa12.88□□□□□ -0.35
RPUSD3-208ENST00000433972 TMEM123Q8N131 208 aa12.88□□□□□ -0.35
RPUSD3-208ENST00000433972 ZNF786Q8N393 782 aa12.88□□□□□ -0.35
RPUSD3-208ENST00000433972 SVOPLQ8N434 492 aa12.88□□□□□ -0.35
RPUSD3-208ENST00000433972 RBM15BQ8NDT2 890 aaKnown RBP12.88□□□□□ -0.35
RPUSD3-208ENST00000433972 MCUR1Q96AQ8 359 aa12.88□□□□□ -0.35
RPUSD3-208ENST00000433972 HSH2DQ96JZ2 352 aa12.88□□□□□ -0.35
RPUSD3-208ENST00000433972 PRRC1Q96M27 445 aa12.88□□□□□ -0.35
RPUSD3-208ENST00000433972 DOK1Q99704 481 aa12.88□□□□□ -0.35
RPUSD3-208ENST00000433972 C1orf21Q9H246 121 aa12.88□□□□□ -0.35
RPUSD3-208ENST00000433972 DCAF13Q9NV06 445 aaKnown RBP12.88□□□□□ -0.35
RPUSD3-208ENST00000433972 CD300AQ9UGN4 299 aa12.88□□□□□ -0.35
RPUSD3-208ENST00000433972 POFUT2Q9Y2G5 429 aa12.88□□□□□ -0.35
RPUSD3-208ENST00000433972 SNX13Q9Y5W8 968 aa12.88□□□□□ -0.35
RPUSD3-208ENST00000433972 IGKV1D-42A0A075B6H8 117 aa12.87□□□□□ -0.35
RPUSD3-208ENST00000433972 M0R3G1 203 aa12.87□□□□□ -0.35
RPUSD3-208ENST00000433972 TACSTD2P09758 323 aa12.87□□□□□ -0.35
RPUSD3-208ENST00000433972 ITGA2P17301 1181 aa12.87□□□□□ -0.35
RPUSD3-208ENST00000433972 RBM34P42696 430 aaKnown RBP12.87□□□□□ -0.35
RPUSD3-208ENST00000433972 GALK2Q01415 458 aa12.87□□□□□ -0.35
RPUSD3-208ENST00000433972 PUDPQ08623 228 aa12.87□□□□□ -0.35
RPUSD3-208ENST00000433972 PMS2P3Q13401 168 aa12.87□□□□□ -0.35
RPUSD3-208ENST00000433972 ZNF813Q6ZN06 617 aa12.87□□□□□ -0.35
RPUSD3-208ENST00000433972 RRM2BQ7LG56 351 aa12.87□□□□□ -0.35
RPUSD3-208ENST00000433972 VTCN1Q7Z7D3 282 aa12.87□□□□□ -0.35
RPUSD3-208ENST00000433972 C20orf196Q8IYI0 205 aa12.87□□□□□ -0.35
RPUSD3-208ENST00000433972 FAM156AQ8NDB6 213 aa12.87□□□□□ -0.35
RPUSD3-208ENST00000433972 OR6N1Q8NGY5 312 aa12.87□□□□□ -0.35
RPUSD3-208ENST00000433972 UBASH3BQ8TF42 649 aa12.87□□□□□ -0.35
RPUSD3-208ENST00000433972 POP5Q969H6 163 aaKnown RBP12.87□□□□□ -0.35
RPUSD3-208ENST00000433972 ULBP2Q9BZM5 246 aa12.87□□□□□ -0.35
RPUSD3-208ENST00000433972 MUC13Q9H3R2 512 aa12.87□□□□□ -0.35
RPUSD3-208ENST00000433972 MS4A5Q9H3V2 200 aa12.87□□□□□ -0.35
RPUSD3-208ENST00000433972 NOX3Q9HBY0 568 aa12.87□□□□□ -0.35
RPUSD3-208ENST00000433972 MRPL39Q9NYK5 338 aaKnown RBP12.87□□□□□ -0.35
RPUSD3-208ENST00000433972 SEC14L4Q9UDX3 406 aa12.87□□□□□ -0.35
RPUSD3-208ENST00000433972 PRPF19Q9UMS4 504 aaKnown RBP12.87□□□□□ -0.35
RPUSD3-208ENST00000433972 MED31Q9Y3C7 131 aa12.87□□□□□ -0.35
RPUSD3-208ENST00000433972 SYNGR3O43761 229 aa12.86□□□□□ -0.35
RPUSD3-208ENST00000433972 UBL3O95164 117 aa12.86□□□□□ -0.35
RPUSD3-208ENST00000433972 RAB36O95755 333 aa12.86□□□□□ -0.35
RPUSD3-208ENST00000433972 CELA3BP08861 270 aa12.86□□□□□ -0.35
RPUSD3-208ENST00000433972 T-ENOLP0DO92 83 aa12.86□□□□□ -0.35
RPUSD3-208ENST00000433972 UMPSP11172 480 aa12.86□□□□□ -0.35
RPUSD3-208ENST00000433972 CD79AP11912 226 aa12.86□□□□□ -0.35
RPUSD3-208ENST00000433972 IFNGR1P15260 489 aa12.86□□□□□ -0.35
RPUSD3-208ENST00000433972 NR4A1P22736 598 aa12.86□□□□□ -0.35
RPUSD3-208ENST00000433972 APEX1P27695 318 aaKnown RBP12.86□□□□□ -0.35
RPUSD3-208ENST00000433972 RASSF2P50749 326 aa12.86□□□□□ -0.35
RPUSD3-208ENST00000433972 TRAM2Q15035 370 aa12.86□□□□□ -0.35
RPUSD3-208ENST00000433972 KRT80Q6KB66 452 aa12.86□□□□□ -0.35
RPUSD3-208ENST00000433972 RINLQ6ZS11 566 aa12.86□□□□□ -0.35
RPUSD3-208ENST00000433972 ZNF627Q7L945 461 aa12.86□□□□□ -0.35
RPUSD3-208ENST00000433972 PXKQ7Z7A4 578 aa12.86□□□□□ -0.35
RPUSD3-208ENST00000433972 CDK20Q8IZL9 346 aa12.86□□□□□ -0.35
RPUSD3-208ENST00000433972 ARIH2OSQ8N7S6 290 aa12.86□□□□□ -0.35
RPUSD3-208ENST00000433972 LINC01356Q8N9X3 169 aa12.86□□□□□ -0.35
RPUSD3-208ENST00000433972 TMEM239Q8WW34 195 aa12.86□□□□□ -0.35
RPUSD3-208ENST00000433972 PYURFQ96I23 114 aa12.86□□□□□ -0.35
RPUSD3-208ENST00000433972 SEC61A2Q9H9S3 476 aa12.86□□□□□ -0.35
RPUSD3-208ENST00000433972 NANSQ9NR45 359 aa12.86□□□□□ -0.35
RPUSD3-208ENST00000433972 SH3PXD2BA1X283 911 aa12.85□□□□□ -0.35
RPUSD3-208ENST00000433972 SLC35F4A4IF30 521 aa12.85□□□□□ -0.35
RPUSD3-208ENST00000433972 M0R233 179 aa12.85□□□□□ -0.35
RPUSD3-208ENST00000433972 KPNA4O00629 521 aaPredicted RBP12.85□□□□□ -0.35
RPUSD3-208ENST00000433972 GYG2O15488 501 aa12.85□□□□□ -0.35
RPUSD3-208ENST00000433972 CH25HO95992 272 aa12.85□□□□□ -0.35
RPUSD3-208ENST00000433972 BGLAPP02818 100 aa12.85□□□□□ -0.35
RPUSD3-208ENST00000433972 MT-ND1P03886 318 aa12.85□□□□□ -0.35
RPUSD3-208ENST00000433972 CBLP22681 906 aa12.85□□□□□ -0.35
RPUSD3-208ENST00000433972 AHCYP23526 432 aa12.85□□□□□ -0.35
RPUSD3-208ENST00000433972 MSX2P35548 267 aaPredicted RBP12.85□□□□□ -0.35
RPUSD3-208ENST00000433972 YAP1P46937 504 aaKnown RBP12.85□□□□□ -0.35
RPUSD3-208ENST00000433972 SMIM11AP58511 58 aa12.85□□□□□ -0.35
RPUSD3-208ENST00000433972 SCGB2A2Q13296 93 aa12.85□□□□□ -0.35
RPUSD3-208ENST00000433972 FXNQ16595 210 aa12.85□□□□□ -0.35
RPUSD3-208ENST00000433972 CR1LQ2VPA4 569 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms