RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 CCL21O00585 134 aa1.93□□□□□ -2.1
PTPN4-205ENST00000433888 CASC3O15234 703 aaKnown RBP1.93□□□□□ -2.1
PTPN4-205ENST00000433888 LALBAP00709 142 aa1.93□□□□□ -2.1
PTPN4-205ENST00000433888 IFNA8P32881 189 aa1.93□□□□□ -2.1
PTPN4-205ENST00000433888 NAMPTP43490 491 aa1.93□□□□□ -2.1
PTPN4-205ENST00000433888 RORCP51449 518 aa1.93□□□□□ -2.1
PTPN4-205ENST00000433888 CCNHP51946 323 aaPredicted RBP1.93□□□□□ -2.1
PTPN4-205ENST00000433888 CRYBB1P53674 252 aaPredicted RBP1.93□□□□□ -2.1
PTPN4-205ENST00000433888 CLDN8P56748 225 aa1.93□□□□□ -2.1
PTPN4-205ENST00000433888 YWHAGP61981 247 aaKnown RBP eCLIP1.93□□□□□ -2.1
PTPN4-205ENST00000433888 CSNK1G2P78368 415 aa1.93□□□□□ -2.1
PTPN4-205ENST00000433888 XIAPP98170 497 aa1.93□□□□□ -2.1
PTPN4-205ENST00000433888 DAZ2Q13117 558 aaKnown RBP1.93□□□□□ -2.1
PTPN4-205ENST00000433888 C16orf72Q14CZ0 275 aa1.93□□□□□ -2.1
PTPN4-205ENST00000433888 PAGE3Q5JUK9 113 aa1.93□□□□□ -2.1
PTPN4-205ENST00000433888 LCN12Q6JVE5 192 aa1.93□□□□□ -2.1
PTPN4-205ENST00000433888 ANKRD26P1Q6NSI1 321 aa1.93□□□□□ -2.1
PTPN4-205ENST00000433888 ANGPTL8Q6UXH0 198 aa1.93□□□□□ -2.1
PTPN4-205ENST00000433888 UNQ9370/PRO34162Q6UXP9 181 aa1.93□□□□□ -2.1
PTPN4-205ENST00000433888 C12orf54Q6X4T0 127 aa1.93□□□□□ -2.1
PTPN4-205ENST00000433888 ZNF620Q6ZNG0 422 aa1.93□□□□□ -2.1
PTPN4-205ENST00000433888 OTUD6AQ7L8S5 288 aa1.93□□□□□ -2.1
PTPN4-205ENST00000433888 HSD17B13Q7Z5P4 300 aaPredicted RBP1.93□□□□□ -2.1
PTPN4-205ENST00000433888 MFSD6LQ8IWD5 586 aa1.93□□□□□ -2.1
PTPN4-205ENST00000433888 TMEM252Q8N6L7 170 aa1.93□□□□□ -2.1
PTPN4-205ENST00000433888 CEP112Q8N8E3 955 aa1.93□□□□□ -2.1
PTPN4-205ENST00000433888 BBS1Q8NFJ9 593 aa1.93□□□□□ -2.1
PTPN4-205ENST00000433888 OR4A4PQ8NGN8 299 aa1.93□□□□□ -2.1
PTPN4-205ENST00000433888 OR52E5Q8NH55 327 aa1.93□□□□□ -2.1
PTPN4-205ENST00000433888 ZNF502Q8TBZ5 544 aa1.93□□□□□ -2.1
PTPN4-205ENST00000433888 ANKRD49Q8WVL7 239 aa1.93□□□□□ -2.1
PTPN4-205ENST00000433888 FAM151AQ8WW52 585 aa1.93□□□□□ -2.1
PTPN4-205ENST00000433888 DCUN1D4Q92564 292 aa1.93□□□□□ -2.1
PTPN4-205ENST00000433888 SMARCD2Q92925 531 aa1.93□□□□□ -2.1
PTPN4-205ENST00000433888 MARC2Q969Z3 335 aa1.93□□□□□ -2.1
PTPN4-205ENST00000433888 ISG20Q96AZ6 181 aaKnown RBP1.93□□□□□ -2.1
PTPN4-205ENST00000433888 SEC22AQ96IW7 307 aa1.93□□□□□ -2.1
PTPN4-205ENST00000433888 KCNA7Q96RP8 456 aa1.93□□□□□ -2.1
PTPN4-205ENST00000433888 CNPY3Q9BT09 278 aa1.93□□□□□ -2.1
PTPN4-205ENST00000433888 SMYD3Q9H7B4 428 aa1.93□□□□□ -2.1
PTPN4-205ENST00000433888 FOLH1BQ9HBA9 442 aa1.93□□□□□ -2.1
PTPN4-205ENST00000433888 LY9Q9HBG7 655 aa1.93□□□□□ -2.1
PTPN4-205ENST00000433888 LYRM4Q9HD34 91 aa1.93□□□□□ -2.1
PTPN4-205ENST00000433888 DAZ3Q9NR90 486 aaKnown RBP1.93□□□□□ -2.1
PTPN4-205ENST00000433888 NECAP2Q9NVZ3 263 aa1.93□□□□□ -2.1
PTPN4-205ENST00000433888 GIN1Q9NXP7 522 aa1.93□□□□□ -2.1
PTPN4-205ENST00000433888 KCNIP1Q9NZI2 227 aa1.93□□□□□ -2.1
PTPN4-205ENST00000433888 ZNF282Q9UDV7 671 aaPredicted RBP1.93□□□□□ -2.1
PTPN4-205ENST00000433888 NUP50Q9UKX7 468 aa1.93□□□□□ -2.1
PTPN4-205ENST00000433888 PRG3Q9Y2Y8 225 aaPredicted RBP1.93□□□□□ -2.1
PTPN4-205ENST00000433888 UGT2A1Q9Y4X1 527 aa1.93□□□□□ -2.1
PTPN4-205ENST00000433888 UBN2Q6ZU65 1347 aa1.92□□□□□ -2.1
PTPN4-205ENST00000433888 SCN2AQ99250 2005 aa1.92□□□□□ -2.1
PTPN4-205ENST00000433888 LOC110117498-PIK3R3F6TDL0 507 aa1.92□□□□□ -2.1
PTPN4-205ENST00000433888 L7N2F9 121 aa1.92□□□□□ -2.1
PTPN4-205ENST00000433888 BCKDKO14874 412 aa1.92□□□□□ -2.1
PTPN4-205ENST00000433888 TBL1XO60907 577 aa1.92□□□□□ -2.1
PTPN4-205ENST00000433888 CABYRO75952 493 aa1.92□□□□□ -2.1
PTPN4-205ENST00000433888 CLPXO76031 633 aa1.92□□□□□ -2.1
PTPN4-205ENST00000433888 ERLIN2O94905 339 aa1.92□□□□□ -2.1
PTPN4-205ENST00000433888 OR2F2O95006 317 aa1.92□□□□□ -2.1
PTPN4-205ENST00000433888 TGM6O95932 706 aa1.92□□□□□ -2.1
PTPN4-205ENST00000433888 CSTAP01040 98 aa1.92□□□□□ -2.1
PTPN4-205ENST00000433888 STSP08842 583 aa1.92□□□□□ -2.1
PTPN4-205ENST00000433888 FOLR1P15328 257 aa1.92□□□□□ -2.1
PTPN4-205ENST00000433888 NTSP30990 170 aa1.92□□□□□ -2.1
PTPN4-205ENST00000433888 KIR2DS2P43631 304 aa1.92□□□□□ -2.1
PTPN4-205ENST00000433888 MRPS22P82650 360 aaKnown RBP1.92□□□□□ -2.1
PTPN4-205ENST00000433888 CHRNB3Q05901 458 aa1.92□□□□□ -2.1
PTPN4-205ENST00000433888 ZSCAN26Q16670 478 aa1.92□□□□□ -2.1
PTPN4-205ENST00000433888 DGUOKQ16854 277 aa1.92□□□□□ -2.1
PTPN4-205ENST00000433888 C6orf183Q5T699 404 aa1.92□□□□□ -2.1
PTPN4-205ENST00000433888 C9orf135Q5VTT2 229 aa1.92□□□□□ -2.1
PTPN4-205ENST00000433888 REEP3Q6NUK4 255 aa1.92□□□□□ -2.1
PTPN4-205ENST00000433888 MMAAQ8IVH4 418 aaKnown RBP1.92□□□□□ -2.1
PTPN4-205ENST00000433888 TMEM61Q8N0U2 210 aa1.92□□□□□ -2.1
PTPN4-205ENST00000433888 GABRG1Q8N1C3 465 aa1.92□□□□□ -2.1
PTPN4-205ENST00000433888 COMMD1Q8N668 190 aa1.92□□□□□ -2.1
PTPN4-205ENST00000433888 PQLC3Q8N755 202 aa1.92□□□□□ -2.1
PTPN4-205ENST00000433888 LRRC75AQ8NAA5 344 aa1.92□□□□□ -2.1
PTPN4-205ENST00000433888 FNDC5Q8NAU1 212 aa1.92□□□□□ -2.1
PTPN4-205ENST00000433888 OR7G2Q8NG99 324 aa1.92□□□□□ -2.1
PTPN4-205ENST00000433888 OR4A15Q8NGL6 344 aa1.92□□□□□ -2.1
PTPN4-205ENST00000433888 RHEBL1Q8TAI7 183 aa1.92□□□□□ -2.1
PTPN4-205ENST00000433888 MARCH1Q8TCQ1 289 aa1.92□□□□□ -2.1
PTPN4-205ENST00000433888 NEIL2Q969S2 332 aa1.92□□□□□ -2.1
PTPN4-205ENST00000433888 CERS2Q96G23 380 aa1.92□□□□□ -2.1
PTPN4-205ENST00000433888 DUS3LQ96G46 650 aaKnown RBP1.92□□□□□ -2.1
PTPN4-205ENST00000433888 ITCHQ96J02 903 aa1.92□□□□□ -2.1
PTPN4-205ENST00000433888 CFAP53Q96M91 514 aa1.92□□□□□ -2.1
PTPN4-205ENST00000433888 P2RY13Q9BPV8 354 aa1.92□□□□□ -2.1
PTPN4-205ENST00000433888 RIOK1Q9BRS2 568 aaKnown RBP1.92□□□□□ -2.1
PTPN4-205ENST00000433888 PELOQ9BRX2 385 aaKnown RBP1.92□□□□□ -2.1
PTPN4-205ENST00000433888 FAIM2Q9BWQ8 316 aa1.92□□□□□ -2.1
PTPN4-205ENST00000433888 SRXN1Q9BYN0 137 aa1.92□□□□□ -2.1
PTPN4-205ENST00000433888 ANKRD60Q9BZ19 345 aa1.92□□□□□ -2.1
PTPN4-205ENST00000433888 UCK2Q9BZX2 261 aa1.92□□□□□ -2.1
PTPN4-205ENST00000433888 IQCGQ9H095 443 aaKnown RBP1.92□□□□□ -2.1
PTPN4-205ENST00000433888 NXF3Q9H4D5 531 aaKnown RBP1.92□□□□□ -2.1
PTPN4-205ENST00000433888 FBXO44Q9H4M3 255 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms