RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 VSX1Q9NZR4 365 aaPredicted RBP14.96□□□□□ -0.01
USHBP1-203ENST00000431146 COMMD3Q9UBI1 195 aa14.96□□□□□ -0.01
USHBP1-203ENST00000431146 MRM2Q9UI43 246 aaKnown RBP14.96□□□□□ -0.01
USHBP1-203ENST00000431146 KCNG2Q9UJ96 466 aa14.96□□□□□ -0.01
USHBP1-203ENST00000431146 NPIPA1Q9UND3 350 aa14.96□□□□□ -0.01
USHBP1-203ENST00000431146 TRIM3O75382 744 aaPredicted RBP14.95□□□□□ -0.02
USHBP1-203ENST00000431146 UPK1BO75841 260 aa14.95□□□□□ -0.02
USHBP1-203ENST00000431146 DPP4P27487 766 aa14.95□□□□□ -0.02
USHBP1-203ENST00000431146 DNASE1L1P49184 302 aa14.95□□□□□ -0.02
USHBP1-203ENST00000431146 HSF1Q00613 529 aa14.95□□□□□ -0.02
USHBP1-203ENST00000431146 CHPT1Q8WUD6 406 aa14.95□□□□□ -0.02
USHBP1-203ENST00000431146 ASB10Q8WXI3 467 aa14.95□□□□□ -0.02
USHBP1-203ENST00000431146 RNF166Q96A37 237 aaPredicted RBP14.95□□□□□ -0.02
USHBP1-203ENST00000431146 ALKBH4Q9NXW9 302 aa14.95□□□□□ -0.02
USHBP1-203ENST00000431146 IKZF2Q9UKS7 526 aa14.95□□□□□ -0.02
USHBP1-203ENST00000431146 FKBP7Q9Y680 259 aa14.95□□□□□ -0.02
USHBP1-203ENST00000431146 IGLV1-36A0A0B4J1U3 117 aa14.95□□□□□ -0.02
USHBP1-203ENST00000431146 A0A1B0GTH9 108 aa14.95□□□□□ -0.02
USHBP1-203ENST00000431146 LOC101059948A0A1B0GTJ6 334 aa14.95□□□□□ -0.02
USHBP1-203ENST00000431146 ZNF814B7Z6K7 855 aa14.95□□□□□ -0.02
USHBP1-203ENST00000431146 MPZL1O95297 269 aa14.95□□□□□ -0.02
USHBP1-203ENST00000431146 ICAM2P13598 275 aa14.95□□□□□ -0.02
USHBP1-203ENST00000431146 GALP22466 123 aa14.95□□□□□ -0.02
USHBP1-203ENST00000431146 ETV6P41212 452 aa14.95□□□□□ -0.02
USHBP1-203ENST00000431146 OR2B6P58173 313 aa14.95□□□□□ -0.02
USHBP1-203ENST00000431146 HSF2Q03933 536 aa14.95□□□□□ -0.02
USHBP1-203ENST00000431146 ZP4Q12836 540 aa14.95□□□□□ -0.02
USHBP1-203ENST00000431146 RPL22L1Q6P5R6 122 aaKnown RBP14.95□□□□□ -0.02
USHBP1-203ENST00000431146 GPAT4Q86UL3 456 aa14.95□□□□□ -0.02
USHBP1-203ENST00000431146 YIPF7Q8N8F6 280 aa14.95□□□□□ -0.02
USHBP1-203ENST00000431146 OR1J4Q8NGS1 313 aa14.95□□□□□ -0.02
USHBP1-203ENST00000431146 SDHCQ99643 169 aaPredicted RBP14.95□□□□□ -0.02
USHBP1-203ENST00000431146 MRPL22Q9NWU5 206 aaKnown RBP14.95□□□□□ -0.02
USHBP1-203ENST00000431146 LOC110117498-PIK3R3F6TDL0 507 aa14.94□□□□□ -0.02
USHBP1-203ENST00000431146 ZNF593O00488 134 aaPredicted RBP14.94□□□□□ -0.02
USHBP1-203ENST00000431146 SC5DO75845 299 aa14.94□□□□□ -0.02
USHBP1-203ENST00000431146 LIFP15018 202 aa14.94□□□□□ -0.02
USHBP1-203ENST00000431146 CD53P19397 219 aa14.94□□□□□ -0.02
USHBP1-203ENST00000431146 MAGEB1P43366 347 aa14.94□□□□□ -0.02
USHBP1-203ENST00000431146 OR10A3P58181 314 aa14.94□□□□□ -0.02
USHBP1-203ENST00000431146 RPS11P62280 158 aaKnown RBP eCLIP14.94□□□□□ -0.02
USHBP1-203ENST00000431146 CHAF1BQ13112 559 aa14.94□□□□□ -0.02
USHBP1-203ENST00000431146 LIPNQ5VXI9 398 aa14.94□□□□□ -0.02
USHBP1-203ENST00000431146 STEAP3Q658P3 488 aa14.94□□□□□ -0.02
USHBP1-203ENST00000431146 SYT9Q86SS6 491 aa14.94□□□□□ -0.02
USHBP1-203ENST00000431146 LYSMD2Q8IV50 215 aa14.94□□□□□ -0.02
USHBP1-203ENST00000431146 DEFB124Q8NES8 71 aa14.94□□□□□ -0.02
USHBP1-203ENST00000431146 GIMAP1Q8WWP7 306 aa14.94□□□□□ -0.02
USHBP1-203ENST00000431146 ORAI1Q96D31 301 aa14.94□□□□□ -0.02
USHBP1-203ENST00000431146 MRPL48Q96GC5 212 aaKnown RBP14.94□□□□□ -0.02
USHBP1-203ENST00000431146 KLHL15Q96M94 604 aa14.94□□□□□ -0.02
USHBP1-203ENST00000431146 OR14A2Q96R54 314 aa14.94□□□□□ -0.02
USHBP1-203ENST00000431146 ATF6BQ99941 703 aa14.94□□□□□ -0.02
USHBP1-203ENST00000431146 C14orf119Q9NWQ9 140 aa14.94□□□□□ -0.02
USHBP1-203ENST00000431146 B3GAT1Q9P2W7 334 aa14.94□□□□□ -0.02
USHBP1-203ENST00000431146 COA3Q9Y2R0 106 aaPredicted RBP14.94□□□□□ -0.02
USHBP1-203ENST00000431146 PCDHGA1Q9Y5H4 931 aa14.94□□□□□ -0.02
USHBP1-203ENST00000431146 V9GYH0 126 aa14.94□□□□□ -0.02
USHBP1-203ENST00000431146 MED13Q9UHV7 2174 aa14.94□□□□□ -0.02
USHBP1-203ENST00000431146 IGKV1D-43A0A0B4J1Z2 117 aa14.93□□□□□ -0.02
USHBP1-203ENST00000431146 BOLA2-SMG1P6H3BVE0 249 aa14.93□□□□□ -0.02
USHBP1-203ENST00000431146 SNPHO15079 494 aa14.93□□□□□ -0.02
USHBP1-203ENST00000431146 RAMP1O60894 148 aa14.93□□□□□ -0.02
USHBP1-203ENST00000431146 OCM2P0CE71 109 aa14.93□□□□□ -0.02
USHBP1-203ENST00000431146 OCMP0CE72 109 aaPredicted RBP14.93□□□□□ -0.02
USHBP1-203ENST00000431146 ALOX5APP20292 161 aa14.93□□□□□ -0.02
USHBP1-203ENST00000431146 AZGP1P25311 298 aaKnown RBP14.93□□□□□ -0.02
USHBP1-203ENST00000431146 CAPZA2P47755 286 aa14.93□□□□□ -0.02
USHBP1-203ENST00000431146 MAP2K6P52564 334 aa14.93□□□□□ -0.02
USHBP1-203ENST00000431146 EIF3IQ13347 325 aaKnown RBP14.93□□□□□ -0.02
USHBP1-203ENST00000431146 TOMM20Q15388 145 aa14.93□□□□□ -0.02
USHBP1-203ENST00000431146 ACER2Q5QJU3 275 aa14.93□□□□□ -0.02
USHBP1-203ENST00000431146 RAET1LQ5VY80 246 aa14.93□□□□□ -0.02
USHBP1-203ENST00000431146 TMEM81Q6P7N7 255 aa14.93□□□□□ -0.02
USHBP1-203ENST00000431146 SPATC1Q76KD6 591 aa14.93□□□□□ -0.02
USHBP1-203ENST00000431146 ARMC10Q8N2F6 343 aa14.93□□□□□ -0.02
USHBP1-203ENST00000431146 THOC3Q96J01 351 aaKnown RBP14.93□□□□□ -0.02
USHBP1-203ENST00000431146 B3GALT5Q9Y2C3 310 aa14.93□□□□□ -0.02
USHBP1-203ENST00000431146 UPK3AO75631 287 aa14.93□□□□□ -0.02
USHBP1-203ENST00000431146 SPARCP09486 303 aa14.93□□□□□ -0.02
USHBP1-203ENST00000431146 EIF1P41567 113 aaKnown RBP14.93□□□□□ -0.02
USHBP1-203ENST00000431146 MTNR1BP49286 362 aa14.93□□□□□ -0.02
USHBP1-203ENST00000431146 DAP3P51398 398 aaKnown RBP14.93□□□□□ -0.02
USHBP1-203ENST00000431146 BIDP55957 195 aa14.93□□□□□ -0.02
USHBP1-203ENST00000431146 GPR85P60893 370 aa14.93□□□□□ -0.02
USHBP1-203ENST00000431146 SELENBP1Q13228 472 aa14.93□□□□□ -0.02
USHBP1-203ENST00000431146 TRAM1Q15629 374 aa14.93□□□□□ -0.02
USHBP1-203ENST00000431146 CSRP2Q16527 193 aa14.93□□□□□ -0.02
USHBP1-203ENST00000431146 TRIM16LQ309B1 348 aa14.93□□□□□ -0.02
USHBP1-203ENST00000431146 DDI2Q5TDH0 399 aa14.93□□□□□ -0.02
USHBP1-203ENST00000431146 FAM220AQ7Z4H9 259 aa14.93□□□□□ -0.02
USHBP1-203ENST00000431146 PXKQ7Z7A4 578 aa14.93□□□□□ -0.02
USHBP1-203ENST00000431146 BEST3Q8N1M1 668 aa14.93□□□□□ -0.02
USHBP1-203ENST00000431146 MS4A15Q8N5U1 240 aa14.93□□□□□ -0.02
USHBP1-203ENST00000431146 PSMF1Q92530 271 aa14.93□□□□□ -0.02
USHBP1-203ENST00000431146 ZBTB8AQ96BR9 441 aa14.93□□□□□ -0.02
USHBP1-203ENST00000431146 FAM86C1Q9NVL1 165 aa14.93□□□□□ -0.02
USHBP1-203ENST00000431146 IL17BQ9UHF5 180 aa14.93□□□□□ -0.02
USHBP1-203ENST00000431146 DKKL1Q9UK85 242 aa14.93□□□□□ -0.02
USHBP1-203ENST00000431146 CNOT1A5YKK6 2376 aaKnown RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms