RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 CD1CP29017 333 aa4.9□□□□□ -1.62
PTPN4-203ENST00000430976 CYB561P49447 251 aa4.9□□□□□ -1.62
PTPN4-203ENST00000430976 OR10A3P58181 314 aa4.9□□□□□ -1.62
PTPN4-203ENST00000430976 PRR5P85299 388 aa4.9□□□□□ -1.62
PTPN4-203ENST00000430976 SRSF1Q07955 248 aaKnown RBP eCLIP4.9□□□□□ -1.62
PTPN4-203ENST00000430976 MLLT11Q13015 90 aaPredicted RBP4.9□□□□□ -1.62
PTPN4-203ENST00000430976 ELAVL3Q14576 367 aaKnown RBP4.9□□□□□ -1.62
PTPN4-203ENST00000430976 UGCGQ16739 394 aa4.9□□□□□ -1.62
PTPN4-203ENST00000430976 PPM1JQ5JR12 505 aa4.9□□□□□ -1.62
PTPN4-203ENST00000430976 RHBDF2Q6PJF5 856 aa4.9□□□□□ -1.62
PTPN4-203ENST00000430976 ZNF676Q8N7Q3 588 aa4.9□□□□□ -1.62
PTPN4-203ENST00000430976 RELL2Q8NC24 303 aaPredicted RBP4.9□□□□□ -1.62
PTPN4-203ENST00000430976 SLC26A10Q8NG04 563 aa4.9□□□□□ -1.62
PTPN4-203ENST00000430976 OR2T35Q8NGX2 323 aa4.9□□□□□ -1.62
PTPN4-203ENST00000430976 OR8D1Q8WZ84 308 aa4.9□□□□□ -1.62
PTPN4-203ENST00000430976 MRPL57Q9BQC6 102 aaKnown RBP4.9□□□□□ -1.62
PTPN4-203ENST00000430976 EFCAB11Q9BUY7 163 aa4.9□□□□□ -1.62
PTPN4-203ENST00000430976 ATG5Q9H1Y0 275 aa4.9□□□□□ -1.62
PTPN4-203ENST00000430976 JKAMPQ9P055 326 aa4.9□□□□□ -1.62
PTPN4-203ENST00000430976 STYXL1Q9Y6J8 313 aa4.9□□□□□ -1.62
PTPN4-203ENST00000430976 POLR1AO95602 1720 aaPredicted RBP4.9□□□□□ -1.62
PTPN4-203ENST00000430976 A8MWP6 167 aa4.9□□□□□ -1.63
PTPN4-203ENST00000430976 INMT-MINDY4F8WBC2 141 aa4.9□□□□□ -1.63
PTPN4-203ENST00000430976 LIASO43766 372 aa4.9□□□□□ -1.63
PTPN4-203ENST00000430976 GABRB1P18505 474 aa4.9□□□□□ -1.63
PTPN4-203ENST00000430976 SSTR5P35346 364 aa4.9□□□□□ -1.63
PTPN4-203ENST00000430976 WNT7BP56706 349 aa4.9□□□□□ -1.63
PTPN4-203ENST00000430976 FAAP100Q0VG06 881 aa4.9□□□□□ -1.63
PTPN4-203ENST00000430976 GINS1Q14691 196 aa4.9□□□□□ -1.63
PTPN4-203ENST00000430976 OPCMLQ14982 345 aa4.9□□□□□ -1.63
PTPN4-203ENST00000430976 RNPS1Q15287 305 aaKnown RBP4.9□□□□□ -1.63
PTPN4-203ENST00000430976 RBBP7Q16576 425 aa4.9□□□□□ -1.63
PTPN4-203ENST00000430976 BSXQ3C1V8 233 aa4.9□□□□□ -1.63
PTPN4-203ENST00000430976 GLT8D1Q68CQ7 371 aa4.9□□□□□ -1.63
PTPN4-203ENST00000430976 MOB3CQ70IA8 216 aa4.9□□□□□ -1.63
PTPN4-203ENST00000430976 ZC3H3Q8IXZ2 948 aaKnown RBP4.9□□□□□ -1.63
PTPN4-203ENST00000430976 TCTE3Q8IZS6 198 aa4.9□□□□□ -1.63
PTPN4-203ENST00000430976 CSF3RQ99062 836 aa4.9□□□□□ -1.63
PTPN4-203ENST00000430976 NECTIN3Q9NQS3 549 aa4.9□□□□□ -1.63
PTPN4-203ENST00000430976 FAM206AQ9NX38 181 aa4.9□□□□□ -1.63
PTPN4-203ENST00000430976 PSORS1C1Q9UIG5 152 aa4.9□□□□□ -1.63
PTPN4-203ENST00000430976 SLC7A7Q9UM01 511 aa4.9□□□□□ -1.63
PTPN4-203ENST00000430976 ALKQ9UM73 1620 aa4.9□□□□□ -1.63
PTPN4-203ENST00000430976 ZNF609O15014 1411 aa4.9□□□□□ -1.63
PTPN4-203ENST00000430976 PIK3C2GO75747 1445 aa4.9□□□□□ -1.63
PTPN4-203ENST00000430976 PROB1E7EW31 1015 aa4.9□□□□□ -1.63
PTPN4-203ENST00000430976 OR56A5P0C7T3 313 aa4.9□□□□□ -1.63
PTPN4-203ENST00000430976 OR13C7P0DN81 318 aa4.9□□□□□ -1.63
PTPN4-203ENST00000430976 CD22P20273 847 aa4.9□□□□□ -1.63
PTPN4-203ENST00000430976 GABRB3P28472 473 aa4.9□□□□□ -1.63
PTPN4-203ENST00000430976 JAK3P52333 1124 aa4.9□□□□□ -1.63
PTPN4-203ENST00000430976 ERVPABLB-1P60509 514 aa4.9□□□□□ -1.63
PTPN4-203ENST00000430976 GNG5P63218 68 aa4.9□□□□□ -1.63
PTPN4-203ENST00000430976 DLX2Q07687 328 aaPredicted RBP4.9□□□□□ -1.63
PTPN4-203ENST00000430976 ABHD18Q0P651 414 aa4.9□□□□□ -1.63
PTPN4-203ENST00000430976 GAGE5Q13069 117 aa4.9□□□□□ -1.63
PTPN4-203ENST00000430976 GAGE6Q13070 117 aa4.9□□□□□ -1.63
PTPN4-203ENST00000430976 IKZF1Q13422 519 aa4.9□□□□□ -1.63
PTPN4-203ENST00000430976 LDLRAD3Q86YD5 345 aa4.9□□□□□ -1.63
PTPN4-203ENST00000430976 LGI4Q8N135 537 aa4.9□□□□□ -1.63
PTPN4-203ENST00000430976 CCDC71LQ8N9Z2 235 aa4.9□□□□□ -1.63
PTPN4-203ENST00000430976 OR13C6PQ8NH95 151 aa4.9□□□□□ -1.63
PTPN4-203ENST00000430976 FAM110DQ8TAY7 271 aaPredicted RBP4.9□□□□□ -1.63
PTPN4-203ENST00000430976 TFB1MQ8WVM0 346 aaKnown RBP4.9□□□□□ -1.63
PTPN4-203ENST00000430976 C11orf40Q8WZ69 217 aa4.9□□□□□ -1.63
PTPN4-203ENST00000430976 NEIL1Q96FI4 390 aaPredicted RBP4.9□□□□□ -1.63
PTPN4-203ENST00000430976 ADGRG7Q96K78 797 aa4.9□□□□□ -1.63
PTPN4-203ENST00000430976 CIB3Q96Q77 187 aaPredicted RBP4.9□□□□□ -1.63
PTPN4-203ENST00000430976 FCRL5Q96RD9 977 aa4.9□□□□□ -1.63
PTPN4-203ENST00000430976 PKMYT1Q99640 499 aa4.9□□□□□ -1.63
PTPN4-203ENST00000430976 SEBOXQ9HB31 216 aaPredicted RBP4.9□□□□□ -1.63
PTPN4-203ENST00000430976 ZNF226Q9NYT6 803 aa4.9□□□□□ -1.63
PTPN4-203ENST00000430976 A4GNTQ9UNA3 340 aa4.9□□□□□ -1.63
PTPN4-203ENST00000430976 OR5H15A6NDH6 313 aa4.89□□□□□ -1.63
PTPN4-203ENST00000430976 TMEM235A6NFC5 223 aa4.89□□□□□ -1.63
PTPN4-203ENST00000430976 OR5H1A6NKK0 313 aa4.89□□□□□ -1.63
PTPN4-203ENST00000430976 FAAHO00519 579 aa4.89□□□□□ -1.63
PTPN4-203ENST00000430976 UPK3AO75631 287 aa4.89□□□□□ -1.63
PTPN4-203ENST00000430976 F12P00748 615 aaPredicted RBP4.89□□□□□ -1.63
PTPN4-203ENST00000430976 EDN1P05305 212 aa4.89□□□□□ -1.63
PTPN4-203ENST00000430976 GGT2P36268 569 aa4.89□□□□□ -1.63
PTPN4-203ENST00000430976 PBX2P40425 430 aa4.89□□□□□ -1.63
PTPN4-203ENST00000430976 EIF5AL1Q6IS14 154 aaKnown RBP4.89□□□□□ -1.63
PTPN4-203ENST00000430976 PNCKQ6P2M8 343 aa4.89□□□□□ -1.63
PTPN4-203ENST00000430976 TMEM107Q6UX40 140 aa4.89□□□□□ -1.63
PTPN4-203ENST00000430976 TMPRSS11AQ6ZMR5 421 aa4.89□□□□□ -1.63
PTPN4-203ENST00000430976 PARP16Q8N5Y8 322 aa4.89□□□□□ -1.63
PTPN4-203ENST00000430976 WNT2BQ93097 391 aa4.89□□□□□ -1.63
PTPN4-203ENST00000430976 TM4SF19Q96DZ7 209 aa4.89□□□□□ -1.63
PTPN4-203ENST00000430976 LRRC3BQ96PB8 259 aa4.89□□□□□ -1.63
PTPN4-203ENST00000430976 IL17FQ96PD4 163 aa4.89□□□□□ -1.63
PTPN4-203ENST00000430976 PHF7Q9BWX1 381 aaPredicted RBP4.89□□□□□ -1.63
PTPN4-203ENST00000430976 OR11A1Q9GZK7 315 aa4.89□□□□□ -1.63
PTPN4-203ENST00000430976 MEPEQ9NQ76 525 aaPredicted RBP4.89□□□□□ -1.63
PTPN4-203ENST00000430976 PAK1IP1Q9NWT1 392 aaPredicted RBP4.89□□□□□ -1.63
PTPN4-203ENST00000430976 PLEK2Q9NYT0 353 aa4.89□□□□□ -1.63
PTPN4-203ENST00000430976 NDRG4Q9ULP0 352 aaKnown RBP4.89□□□□□ -1.63
PTPN4-203ENST00000430976 HHLA2Q9UM44 414 aa4.89□□□□□ -1.63
PTPN4-203ENST00000430976 AK6Q9Y3D8 172 aaKnown RBP4.89□□□□□ -1.63
PTPN4-203ENST00000430976 SPATA31A6Q5VVP1 1343 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms