RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 FPR2P25090 351 aa15.59■□□□□ 0.09
UPK3BP1-201ENST00000428678 RGS8P57771 180 aaPredicted RBP15.59■□□□□ 0.09
UPK3BP1-201ENST00000428678 GLO1Q04760 184 aa15.59■□□□□ 0.09
UPK3BP1-201ENST00000428678 FOXL1Q12952 345 aa15.59■□□□□ 0.09
UPK3BP1-201ENST00000428678 OR1Q1Q15612 314 aa15.59■□□□□ 0.09
UPK3BP1-201ENST00000428678 TMEM53Q6P2H8 277 aa15.59■□□□□ 0.09
UPK3BP1-201ENST00000428678 WDR88Q6ZMY6 472 aa15.59■□□□□ 0.09
UPK3BP1-201ENST00000428678 KRT73Q86Y46 540 aa15.59■□□□□ 0.09
UPK3BP1-201ENST00000428678 ZNF519Q8TB69 540 aa15.59■□□□□ 0.09
UPK3BP1-201ENST00000428678 GTF3AQ92664 365 aaKnown RBP15.59■□□□□ 0.09
UPK3BP1-201ENST00000428678 GTF2H4Q92759 462 aa15.59■□□□□ 0.09
UPK3BP1-201ENST00000428678 RAB1CQ92928 201 aa15.59■□□□□ 0.09
UPK3BP1-201ENST00000428678 TIMD4Q96H15 378 aa15.59■□□□□ 0.09
UPK3BP1-201ENST00000428678 SPATA5L1Q9BVQ7 753 aa15.59■□□□□ 0.09
UPK3BP1-201ENST00000428678 PAIP1Q9H074 479 aaKnown RBP15.59■□□□□ 0.09
UPK3BP1-201ENST00000428678 CENPHQ9H3R5 247 aa15.59■□□□□ 0.09
UPK3BP1-201ENST00000428678 ZNF696Q9H7X3 374 aa15.59■□□□□ 0.09
UPK3BP1-201ENST00000428678 SDR39U1Q9NRG7 319 aaPredicted RBP15.59■□□□□ 0.09
UPK3BP1-201ENST00000428678 GLTPQ9NZD2 209 aa15.59■□□□□ 0.09
UPK3BP1-201ENST00000428678 CACNG2Q9Y698 323 aa15.59■□□□□ 0.09
UPK3BP1-201ENST00000428678 NOTCH1P46531 2555 aa15.58■□□□□ 0.09
UPK3BP1-201ENST00000428678 A0A0B4J2E0 115 aa15.58■□□□□ 0.08
UPK3BP1-201ENST00000428678 A0A1B0GX12 115 aa15.58■□□□□ 0.08
UPK3BP1-201ENST00000428678 ZNF500O60304 480 aaPredicted RBP15.58■□□□□ 0.08
UPK3BP1-201ENST00000428678 OR6A2O95222 327 aa15.58■□□□□ 0.08
UPK3BP1-201ENST00000428678 FARS2O95363 451 aaKnown RBP15.58■□□□□ 0.08
UPK3BP1-201ENST00000428678 MT-ND5P03915 603 aa15.58■□□□□ 0.08
UPK3BP1-201ENST00000428678 DRD4P21917 467 aa15.58■□□□□ 0.08
UPK3BP1-201ENST00000428678 GATA3P23771 443 aa15.58■□□□□ 0.08
UPK3BP1-201ENST00000428678 TSTQ16762 297 aaKnown RBP15.58■□□□□ 0.08
UPK3BP1-201ENST00000428678 TBC1D28Q2M2D7 210 aa15.58■□□□□ 0.08
UPK3BP1-201ENST00000428678 HFEQ30201 348 aa15.58■□□□□ 0.08
UPK3BP1-201ENST00000428678 GCNT6Q5T4J0 391 aa15.58■□□□□ 0.08
UPK3BP1-201ENST00000428678 HHATQ5VTY9 493 aa15.58■□□□□ 0.08
UPK3BP1-201ENST00000428678 REEP3Q6NUK4 255 aa15.58■□□□□ 0.08
UPK3BP1-201ENST00000428678 SLC2A7Q6PXP3 512 aa15.58■□□□□ 0.08
UPK3BP1-201ENST00000428678 OR5J2Q8NH18 312 aa15.58■□□□□ 0.08
UPK3BP1-201ENST00000428678 TMEM54Q969K7 222 aa15.58■□□□□ 0.08
UPK3BP1-201ENST00000428678 GAL3ST1Q99999 423 aa15.58■□□□□ 0.08
UPK3BP1-201ENST00000428678 C1orf198Q9H425 327 aa15.58■□□□□ 0.08
UPK3BP1-201ENST00000428678 SAP30LQ9HAJ7 183 aa15.58■□□□□ 0.08
UPK3BP1-201ENST00000428678 NTN4Q9HB63 628 aa15.58■□□□□ 0.08
UPK3BP1-201ENST00000428678 TMEM38BQ9NVV0 291 aa15.58■□□□□ 0.08
UPK3BP1-201ENST00000428678 OPN4Q9UHM6 478 aa15.58■□□□□ 0.08
UPK3BP1-201ENST00000428678 SLC13A4Q9UKG4 626 aa15.58■□□□□ 0.08
UPK3BP1-201ENST00000428678 VWFP04275 2813 aa15.58■□□□□ 0.08
UPK3BP1-201ENST00000428678 HKR1P10072 659 aa15.57■□□□□ 0.08
UPK3BP1-201ENST00000428678 ARAFP10398 606 aa15.57■□□□□ 0.08
UPK3BP1-201ENST00000428678 CDH12P55289 794 aa15.57■□□□□ 0.08
UPK3BP1-201ENST00000428678 LCN2P80188 198 aa15.57■□□□□ 0.08
UPK3BP1-201ENST00000428678 CEP85LQ5SZL2 805 aa15.57■□□□□ 0.08
UPK3BP1-201ENST00000428678 RBMS3Q6XE24 437 aaKnown RBP15.57■□□□□ 0.08
UPK3BP1-201ENST00000428678 SLC35D2Q76EJ3 337 aa15.57■□□□□ 0.08
UPK3BP1-201ENST00000428678 RETREG3Q86VR2 466 aa15.57■□□□□ 0.08
UPK3BP1-201ENST00000428678 TREML1Q86YW5 311 aa15.57■□□□□ 0.08
UPK3BP1-201ENST00000428678 GOLGA6L1Q8N7Z2 621 aa15.57■□□□□ 0.08
UPK3BP1-201ENST00000428678 ANKRD42Q8N9B4 389 aa15.57■□□□□ 0.08
UPK3BP1-201ENST00000428678 OR4K5Q8NGD3 323 aa15.57■□□□□ 0.08
UPK3BP1-201ENST00000428678 OR6X1Q8NH79 312 aa15.57■□□□□ 0.08
UPK3BP1-201ENST00000428678 ZNF566Q969W8 418 aa15.57■□□□□ 0.08
UPK3BP1-201ENST00000428678 ZBTB9Q96C00 473 aa15.57■□□□□ 0.08
UPK3BP1-201ENST00000428678 TMEM43Q9BTV4 400 aa15.57■□□□□ 0.08
UPK3BP1-201ENST00000428678 BCL2L14Q9BZR8 327 aa15.57■□□□□ 0.08
UPK3BP1-201ENST00000428678 THAP1Q9NVV9 213 aa15.57■□□□□ 0.08
UPK3BP1-201ENST00000428678 ISPDA4D126 451 aa15.56■□□□□ 0.08
UPK3BP1-201ENST00000428678 UBDO15205 165 aa15.56■□□□□ 0.08
UPK3BP1-201ENST00000428678 DHHO43323 396 aa15.56■□□□□ 0.08
UPK3BP1-201ENST00000428678 MT-ATP6P00846 226 aa15.56■□□□□ 0.08
UPK3BP1-201ENST00000428678 FSHBP01225 129 aa15.56■□□□□ 0.08
UPK3BP1-201ENST00000428678 MAKP20794 623 aa15.56■□□□□ 0.08
UPK3BP1-201ENST00000428678 UCP2P55851 309 aa15.56■□□□□ 0.08
UPK3BP1-201ENST00000428678 CDK6Q00534 326 aa15.56■□□□□ 0.08
UPK3BP1-201ENST00000428678 PLP2Q04941 152 aa15.56■□□□□ 0.08
UPK3BP1-201ENST00000428678 MELKQ14680 651 aa15.56■□□□□ 0.08
UPK3BP1-201ENST00000428678 MOGQ16653 247 aa15.56■□□□□ 0.08
UPK3BP1-201ENST00000428678 PDLIM3Q53GG5 364 aaPredicted RBP15.56■□□□□ 0.08
UPK3BP1-201ENST00000428678 LRFN4Q6PJG9 635 aa15.56■□□□□ 0.08
UPK3BP1-201ENST00000428678 SLC16A14Q7RTX9 510 aa15.56■□□□□ 0.08
UPK3BP1-201ENST00000428678 RANBP3LQ86VV4 465 aaPredicted RBP15.56■□□□□ 0.08
UPK3BP1-201ENST00000428678 SIGLECL1Q8N7X8 197 aa15.56■□□□□ 0.08
UPK3BP1-201ENST00000428678 OR1J2Q8NGS2 313 aa15.56■□□□□ 0.08
UPK3BP1-201ENST00000428678 CCL17Q92583 94 aa15.56■□□□□ 0.08
UPK3BP1-201ENST00000428678 ELMOD3Q96FG2 381 aa15.56■□□□□ 0.08
UPK3BP1-201ENST00000428678 MAELQ96JY0 434 aaKnown RBP15.56■□□□□ 0.08
UPK3BP1-201ENST00000428678 LRMDAQ9H2I8 198 aa15.56■□□□□ 0.08
UPK3BP1-201ENST00000428678 TCF7L2Q9NQB0 619 aa15.56■□□□□ 0.08
UPK3BP1-201ENST00000428678 UBAP1Q9NZ09 502 aa15.56■□□□□ 0.08
UPK3BP1-201ENST00000428678 IQCMA0A1B0GVH7 501 aa15.55■□□□□ 0.08
UPK3BP1-201ENST00000428678 PRORSD1PA6NEY8 169 aa15.55■□□□□ 0.08
UPK3BP1-201ENST00000428678 TPST2O60704 377 aa15.55■□□□□ 0.08
UPK3BP1-201ENST00000428678 SNNO75324 88 aaPredicted RBP15.55■□□□□ 0.08
UPK3BP1-201ENST00000428678 SNAP29O95721 258 aa15.55■□□□□ 0.08
UPK3BP1-201ENST00000428678 PTHP01270 115 aa15.55■□□□□ 0.08
UPK3BP1-201ENST00000428678 ZNF81P51508 661 aa15.55■□□□□ 0.08
UPK3BP1-201ENST00000428678 DEFA6Q01524 100 aa15.55■□□□□ 0.08
UPK3BP1-201ENST00000428678 SLC36A2Q495M3 483 aa15.55■□□□□ 0.08
UPK3BP1-201ENST00000428678 SWT1Q5T5J6 900 aaKnown RBP15.55■□□□□ 0.08
UPK3BP1-201ENST00000428678 DPPA2Q7Z7J5 298 aa15.55■□□□□ 0.08
UPK3BP1-201ENST00000428678 RBM15BQ8NDT2 890 aaKnown RBP15.55■□□□□ 0.08
UPK3BP1-201ENST00000428678 DVL3Q92997 716 aaPredicted RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms