RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 SDHBP21912 280 aa8.25□□□□□ -1.09
CTNND1-208ENST00000428599 HOXD12P35452 270 aa8.25□□□□□ -1.09
CTNND1-208ENST00000428599 LCN6P62502 163 aa8.25□□□□□ -1.09
CTNND1-208ENST00000428599 TSPAN31Q12999 210 aa8.25□□□□□ -1.09
CTNND1-208ENST00000428599 SYPL1Q16563 259 aa8.25□□□□□ -1.09
CTNND1-208ENST00000428599 DEFB109BQ30KR1 87 aa8.25□□□□□ -1.09
CTNND1-208ENST00000428599 RPS19BP1Q86WX3 136 aaKnown RBP8.25□□□□□ -1.09
CTNND1-208ENST00000428599 LACC1Q8IV20 430 aa8.25□□□□□ -1.09
CTNND1-208ENST00000428599 NAXDQ8IW45 347 aa8.25□□□□□ -1.09
CTNND1-208ENST00000428599 PGBD5Q8N414 524 aa8.25□□□□□ -1.09
CTNND1-208ENST00000428599 NMES1Q9C002 83 aa8.25□□□□□ -1.09
CTNND1-208ENST00000428599 GSTO2Q9H4Y5 243 aa8.25□□□□□ -1.09
CTNND1-208ENST00000428599 MTCH1Q9NZJ7 389 aa8.25□□□□□ -1.09
CTNND1-208ENST00000428599 TMEM181Q9P2C4 612 aa8.25□□□□□ -1.09
CTNND1-208ENST00000428599 A0A0D9SG52 128 aa8.24□□□□□ -1.09
CTNND1-208ENST00000428599 PHF1O43189 567 aaPredicted RBP8.24□□□□□ -1.09
CTNND1-208ENST00000428599 FBXO24O75426 580 aa8.24□□□□□ -1.09
CTNND1-208ENST00000428599 LGI1O95970 557 aa8.24□□□□□ -1.09
CTNND1-208ENST00000428599 OR8G3PP0DMU2 310 aa8.24□□□□□ -1.09
CTNND1-208ENST00000428599 FOLR1P15328 257 aa8.24□□□□□ -1.09
CTNND1-208ENST00000428599 TRHRP34981 398 aaPredicted RBP8.24□□□□□ -1.09
CTNND1-208ENST00000428599 RSPO2Q6UXX9 243 aaPredicted RBP8.24□□□□□ -1.09
CTNND1-208ENST00000428599 EXD3Q8N9H8 876 aa8.24□□□□□ -1.09
CTNND1-208ENST00000428599 OR52A1Q9UKL2 312 aa8.24□□□□□ -1.09
CTNND1-208ENST00000428599 PCDHGA5Q9Y5G8 931 aa8.24□□□□□ -1.09
CTNND1-208ENST00000428599 TMEM82A0PJX8 343 aa8.24□□□□□ -1.09
CTNND1-208ENST00000428599 CRYAAP02489 173 aa8.24□□□□□ -1.09
CTNND1-208ENST00000428599 SLC35E2P0CK97 266 aa8.24□□□□□ -1.09
CTNND1-208ENST00000428599 HMGA1P17096 107 aaKnown RBP8.24□□□□□ -1.09
CTNND1-208ENST00000428599 YIF1BQ5BJH7 314 aa8.24□□□□□ -1.09
CTNND1-208ENST00000428599 APOOLQ6UXV4 268 aa8.24□□□□□ -1.09
CTNND1-208ENST00000428599 RFPL4BQ6ZWI9 263 aa8.24□□□□□ -1.09
CTNND1-208ENST00000428599 FCRLAQ7L513 359 aa8.24□□□□□ -1.09
CTNND1-208ENST00000428599 BAGE3Q86Y29 109 aa8.24□□□□□ -1.09
CTNND1-208ENST00000428599 BAGE2Q86Y30 109 aa8.24□□□□□ -1.09
CTNND1-208ENST00000428599 MAML2Q8IZL2 1156 aaPredicted RBP8.24□□□□□ -1.09
CTNND1-208ENST00000428599 OR5D18Q8NGL1 313 aa8.24□□□□□ -1.09
CTNND1-208ENST00000428599 OR10J5Q8NHC4 309 aa8.24□□□□□ -1.09
CTNND1-208ENST00000428599 OR52A5Q9H2C5 316 aa8.24□□□□□ -1.09
CTNND1-208ENST00000428599 PATZ1Q9HBE1 687 aaKnown RBP8.24□□□□□ -1.09
CTNND1-208ENST00000428599 BARX1Q9HBU1 254 aaPredicted RBP8.24□□□□□ -1.09
CTNND1-208ENST00000428599 CPNE5Q9HCH3 593 aa8.24□□□□□ -1.09
CTNND1-208ENST00000428599 MUTYHQ9UIF7 546 aa8.24□□□□□ -1.09
CTNND1-208ENST00000428599 FAM183AA6NL82 134 aa8.24□□□□□ -1.09
CTNND1-208ENST00000428599 P2RY10O00398 339 aa8.24□□□□□ -1.09
CTNND1-208ENST00000428599 ITGAMP11215 1152 aa8.24□□□□□ -1.09
CTNND1-208ENST00000428599 ARR3P36575 388 aa8.24□□□□□ -1.09
CTNND1-208ENST00000428599 RPL35P42766 123 aaKnown RBP8.24□□□□□ -1.09
CTNND1-208ENST00000428599 PSMB3P49720 205 aa8.24□□□□□ -1.09
CTNND1-208ENST00000428599 RBMS2Q15434 407 aaKnown RBP8.24□□□□□ -1.09
CTNND1-208ENST00000428599 HMGN3Q15651 99 aa8.24□□□□□ -1.09
CTNND1-208ENST00000428599 ZNF321PQ8N8H1 164 aa8.24□□□□□ -1.09
CTNND1-208ENST00000428599 BPIFCQ8NFQ6 507 aa8.24□□□□□ -1.09
CTNND1-208ENST00000428599 C3orf49Q96BT1 292 aa8.24□□□□□ -1.09
CTNND1-208ENST00000428599 MENTQ9BUN1 341 aa8.24□□□□□ -1.09
CTNND1-208ENST00000428599 TMEM9BQ9NQ34 198 aa8.24□□□□□ -1.09
CTNND1-208ENST00000428599 THAP10Q9P2Z0 257 aaPredicted RBP8.24□□□□□ -1.09
CTNND1-208ENST00000428599 RPS10-NUDT3A0A1W2PQS6 291 aa8.24□□□□□ -1.09
CTNND1-208ENST00000428599 OR6C65A6NJZ3 312 aa8.24□□□□□ -1.09
CTNND1-208ENST00000428599 EFSO43281 561 aa8.24□□□□□ -1.09
CTNND1-208ENST00000428599 PRICKLE3O43900 615 aaPredicted RBP8.24□□□□□ -1.09
CTNND1-208ENST00000428599 OR2T7P0C7T2 308 aa8.24□□□□□ -1.09
CTNND1-208ENST00000428599 CTRB1P17538 263 aa8.24□□□□□ -1.09
CTNND1-208ENST00000428599 ELAVL4P26378 380 aaKnown RBP8.24□□□□□ -1.09
CTNND1-208ENST00000428599 GIFP27352 417 aa8.24□□□□□ -1.09
CTNND1-208ENST00000428599 RPS10P46783 165 aaKnown RBP8.24□□□□□ -1.09
CTNND1-208ENST00000428599 PPIAP62937 165 aaKnown RBP8.24□□□□□ -1.09
CTNND1-208ENST00000428599 ZNF266Q14584 549 aa8.24□□□□□ -1.09
CTNND1-208ENST00000428599 C4orf17Q53FE4 359 aa8.24□□□□□ -1.09
CTNND1-208ENST00000428599 CTRB2Q6GPI1 263 aa8.24□□□□□ -1.09
CTNND1-208ENST00000428599 ZNF546Q86UE3 836 aa8.24□□□□□ -1.09
CTNND1-208ENST00000428599 CMTM4Q8IZR5 234 aa8.24□□□□□ -1.09
CTNND1-208ENST00000428599 OR51A2Q8NGJ7 313 aa8.24□□□□□ -1.09
CTNND1-208ENST00000428599 CCDC74AQ96AQ1 378 aa8.24□□□□□ -1.09
CTNND1-208ENST00000428599 ASB16Q96NS5 453 aa8.24□□□□□ -1.09
CTNND1-208ENST00000428599 SLC30A3Q99726 388 aa8.24□□□□□ -1.09
CTNND1-208ENST00000428599 MMP28Q9H239 520 aa8.24□□□□□ -1.09
CTNND1-208ENST00000428599 UBE2ZQ9H832 354 aaPredicted RBP8.24□□□□□ -1.09
CTNND1-208ENST00000428599 SEMA4GQ9NTN9 838 aa8.24□□□□□ -1.09
CTNND1-208ENST00000428599 BCORQ6W2J9 1755 aa8.24□□□□□ -1.09
CTNND1-208ENST00000428599 CHEK1O14757 476 aa8.24□□□□□ -1.09
CTNND1-208ENST00000428599 FOXD2O60548 495 aaPredicted RBP8.24□□□□□ -1.09
CTNND1-208ENST00000428599 CTNSO60931 367 aa8.24□□□□□ -1.09
CTNND1-208ENST00000428599 RPL13AP40429 203 aaKnown RBP8.24□□□□□ -1.09
CTNND1-208ENST00000428599 FOXC1Q12948 553 aa8.24□□□□□ -1.09
CTNND1-208ENST00000428599 MLLT11Q13015 90 aaPredicted RBP8.24□□□□□ -1.09
CTNND1-208ENST00000428599 ADPRMQ3LIE5 342 aa8.24□□□□□ -1.09
CTNND1-208ENST00000428599 LRRC56Q8IYG6 542 aaPredicted RBP8.24□□□□□ -1.09
CTNND1-208ENST00000428599 GGHQ92820 318 aa8.24□□□□□ -1.09
CTNND1-208ENST00000428599 PHF7Q9BWX1 381 aaPredicted RBP8.24□□□□□ -1.09
CTNND1-208ENST00000428599 POLDIP2Q9Y2S7 368 aa8.24□□□□□ -1.09
CTNND1-208ENST00000428599 GOLT1BQ9Y3E0 138 aa8.24□□□□□ -1.09
CTNND1-208ENST00000428599 SNNO75324 88 aaPredicted RBP8.23□□□□□ -1.09
CTNND1-208ENST00000428599 UPK1BO75841 260 aa8.23□□□□□ -1.09
CTNND1-208ENST00000428599 CXCL10P02778 98 aa8.23□□□□□ -1.09
CTNND1-208ENST00000428599 NAGAP17050 411 aa8.23□□□□□ -1.09
CTNND1-208ENST00000428599 MAKP20794 623 aa8.23□□□□□ -1.09
CTNND1-208ENST00000428599 IGFBP6P24592 240 aaPredicted RBP8.23□□□□□ -1.09
CTNND1-208ENST00000428599 EVI2BP34910 448 aa8.23□□□□□ -1.09
CTNND1-208ENST00000428599 REEP5Q00765 189 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms