RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 ICA1LQ8NDH6 482 aa14.13□□□□□ -0.15
VARS-216ENST00000428445 OR4D11Q8NGI4 311 aa14.13□□□□□ -0.15
VARS-216ENST00000428445 OR51F2Q8NH61 342 aa14.13□□□□□ -0.15
VARS-216ENST00000428445 SPDL1Q96EA4 605 aa14.13□□□□□ -0.15
VARS-216ENST00000428445 TMEM43Q9BTV4 400 aa14.13□□□□□ -0.15
VARS-216ENST00000428445 SLC7A8Q9UHI5 535 aa14.13□□□□□ -0.15
VARS-216ENST00000428445 SLC13A4Q9UKG4 626 aa14.13□□□□□ -0.15
VARS-216ENST00000428445 PCDHB10Q9UN67 800 aa14.13□□□□□ -0.15
VARS-216ENST00000428445 TRBV5-3A0A0A0MS03 114 aa14.12□□□□□ -0.15
VARS-216ENST00000428445 CPSF4LA6NMK7 179 aaKnown RBP14.12□□□□□ -0.15
VARS-216ENST00000428445 C17orf100A8MU93 164 aa14.12□□□□□ -0.15
VARS-216ENST00000428445 KPNA4O00629 521 aaPredicted RBP14.12□□□□□ -0.15
VARS-216ENST00000428445 FMO6PO60774 539 aa14.12□□□□□ -0.15
VARS-216ENST00000428445 MFN2O95140 757 aa14.12□□□□□ -0.15
VARS-216ENST00000428445 OR6A2O95222 327 aa14.12□□□□□ -0.15
VARS-216ENST00000428445 LYPD3O95274 346 aa14.12□□□□□ -0.15
VARS-216ENST00000428445 MT-ATP6P00846 226 aa14.12□□□□□ -0.15
VARS-216ENST00000428445 TFP02787 698 aa14.12□□□□□ -0.15
VARS-216ENST00000428445 LCKP06239 509 aa14.12□□□□□ -0.15
VARS-216ENST00000428445 RPS23P62266 143 aaKnown RBP14.12□□□□□ -0.15
VARS-216ENST00000428445 TSTQ16762 297 aaKnown RBP14.12□□□□□ -0.15
VARS-216ENST00000428445 DUSP7Q16829 419 aa14.12□□□□□ -0.15
VARS-216ENST00000428445 REP15Q6BDI9 236 aa14.12□□□□□ -0.15
VARS-216ENST00000428445 LINC00114Q6XXX2 140 aa14.12□□□□□ -0.15
VARS-216ENST00000428445 PIWIL3Q7Z3Z3 882 aaKnown RBP14.12□□□□□ -0.15
VARS-216ENST00000428445 ARMC8Q8IUR7 673 aa14.12□□□□□ -0.15
VARS-216ENST00000428445 SLC30A7Q8NEW0 376 aa14.12□□□□□ -0.15
VARS-216ENST00000428445 GPR32P1Q8NGA4 272 aa14.12□□□□□ -0.15
VARS-216ENST00000428445 ZNF418Q8TF45 676 aaPredicted RBP14.12□□□□□ -0.15
VARS-216ENST00000428445 GCDHQ92947 438 aaPredicted RBP14.12□□□□□ -0.15
VARS-216ENST00000428445 ZNF665Q9H7R5 613 aa14.12□□□□□ -0.15
VARS-216ENST00000428445 RNF121Q9H920 327 aa14.12□□□□□ -0.15
VARS-216ENST00000428445 HINT3Q9NQE9 182 aaKnown RBP14.12□□□□□ -0.15
VARS-216ENST00000428445 G6PC2Q9NQR9 355 aa14.12□□□□□ -0.15
VARS-216ENST00000428445 TMEM38BQ9NVV0 291 aa14.12□□□□□ -0.15
VARS-216ENST00000428445 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.12□□□□□ -0.15
VARS-216ENST00000428445 A0A0A6YYJ9 748 aa14.11□□□□□ -0.15
VARS-216ENST00000428445 RNF13O43567 381 aa14.11□□□□□ -0.15
VARS-216ENST00000428445 PLPP2O43688 288 aa14.11□□□□□ -0.15
VARS-216ENST00000428445 MPZL1O95297 269 aa14.11□□□□□ -0.15
VARS-216ENST00000428445 QDPRP09417 244 aa14.11□□□□□ -0.15
VARS-216ENST00000428445 OR8G3PP0DMU2 310 aa14.11□□□□□ -0.15
VARS-216ENST00000428445 EPHA1P21709 976 aa14.11□□□□□ -0.15
VARS-216ENST00000428445 IDH3AP50213 366 aa14.11□□□□□ -0.15
VARS-216ENST00000428445 ATP4BP51164 291 aa14.11□□□□□ -0.15
VARS-216ENST00000428445 RBBP4Q09028 425 aa14.11□□□□□ -0.15
VARS-216ENST00000428445 SELPLGQ14242 412 aa14.11□□□□□ -0.15
VARS-216ENST00000428445 ENTPD8Q5MY95 495 aa14.11□□□□□ -0.15
VARS-216ENST00000428445 RANBP3LQ86VV4 465 aaPredicted RBP14.11□□□□□ -0.15
VARS-216ENST00000428445 LRRC18Q8N456 261 aa14.11□□□□□ -0.15
VARS-216ENST00000428445 C3orf56Q8N813 242 aa14.11□□□□□ -0.15
VARS-216ENST00000428445 HIPK4Q8NE63 616 aa14.11□□□□□ -0.15
VARS-216ENST00000428445 OR4K5Q8NGD3 323 aa14.11□□□□□ -0.15
VARS-216ENST00000428445 OR6T1Q8NGN1 323 aa14.11□□□□□ -0.15
VARS-216ENST00000428445 OR6X1Q8NH79 312 aa14.11□□□□□ -0.15
VARS-216ENST00000428445 VANGL1Q8TAA9 524 aaPredicted RBP14.11□□□□□ -0.15
VARS-216ENST00000428445 SYNPRQ8TBG9 265 aa14.11□□□□□ -0.15
VARS-216ENST00000428445 ARHGDIGQ99819 225 aa14.11□□□□□ -0.15
VARS-216ENST00000428445 TMPRSS13Q9BYE2 586 aa14.11□□□□□ -0.15
VARS-216ENST00000428445 RABEP2Q9H5N1 569 aa14.11□□□□□ -0.15
VARS-216ENST00000428445 TMEM89A2RUT3 159 aa14.1□□□□□ -0.15
VARS-216ENST00000428445 M0QX08 132 aa14.1□□□□□ -0.15
VARS-216ENST00000428445 DHHO43323 396 aa14.1□□□□□ -0.15
VARS-216ENST00000428445 MGRN1O60291 552 aa14.1□□□□□ -0.15
VARS-216ENST00000428445 PNPP00491 289 aa14.1□□□□□ -0.15
VARS-216ENST00000428445 VIMP08670 466 aaKnown RBP14.1□□□□□ -0.15
VARS-216ENST00000428445 LSP1P33241 339 aa14.1□□□□□ -0.15
VARS-216ENST00000428445 ZNF74Q16587 644 aa14.1□□□□□ -0.15
VARS-216ENST00000428445 AGKQ53H12 422 aa14.1□□□□□ -0.15
VARS-216ENST00000428445 TMEM255AQ5JRV8 349 aa14.1□□□□□ -0.15
VARS-216ENST00000428445 ZNF613Q6PF04 617 aa14.1□□□□□ -0.15
VARS-216ENST00000428445 DLEU7Q6UYE1 221 aa14.1□□□□□ -0.15
VARS-216ENST00000428445 PTOV1Q86YD1 416 aa14.1□□□□□ -0.15
VARS-216ENST00000428445 C22orf15Q8WYQ4 148 aa14.1□□□□□ -0.15
VARS-216ENST00000428445 ZNF566Q969W8 418 aa14.1□□□□□ -0.15
VARS-216ENST00000428445 ZNF347Q96SE7 839 aa14.1□□□□□ -0.15
VARS-216ENST00000428445 SLC6A7Q99884 636 aa14.1□□□□□ -0.15
VARS-216ENST00000428445 CPPED1Q9BRF8 314 aaPredicted RBP14.1□□□□□ -0.15
VARS-216ENST00000428445 ZNF416Q9BWM5 594 aa14.1□□□□□ -0.15
VARS-216ENST00000428445 ZNF385DQ9H6B1 395 aa14.1□□□□□ -0.15
VARS-216ENST00000428445 CDH20Q9HBT6 801 aa14.1□□□□□ -0.15
VARS-216ENST00000428445 SLCO1B3Q9NPD5 702 aa14.1□□□□□ -0.15
VARS-216ENST00000428445 ZNF346Q9UL40 294 aaKnown RBP14.1□□□□□ -0.15
VARS-216ENST00000428445 TRAV20A0A0B4J274 112 aa14.09□□□□□ -0.15
VARS-216ENST00000428445 KCNAB3O43448 404 aa14.09□□□□□ -0.15
VARS-216ENST00000428445 DEAF1O75398 565 aaPredicted RBP14.09□□□□□ -0.15
VARS-216ENST00000428445 PGA4P0DJD7 388 aa14.09□□□□□ -0.15
VARS-216ENST00000428445 PGA3P0DJD8 388 aa14.09□□□□□ -0.15
VARS-216ENST00000428445 ZNF250P15622 560 aa14.09□□□□□ -0.15
VARS-216ENST00000428445 UCP2P55851 309 aa14.09□□□□□ -0.15
VARS-216ENST00000428445 KLF3P57682 345 aaPredicted RBP14.09□□□□□ -0.15
VARS-216ENST00000428445 HILS1P60008 231 aa14.09□□□□□ -0.15
VARS-216ENST00000428445 MRPS11P82912 194 aaKnown RBP14.09□□□□□ -0.15
VARS-216ENST00000428445 ZP4Q12836 540 aa14.09□□□□□ -0.15
VARS-216ENST00000428445 AGBL2Q5U5Z8 902 aa14.09□□□□□ -0.15
VARS-216ENST00000428445 ACSM5Q6NUN0 579 aa14.09□□□□□ -0.15
VARS-216ENST00000428445 TMEM154Q6P9G4 183 aa14.09□□□□□ -0.15
VARS-216ENST00000428445 USP51Q70EK9 711 aa14.09□□□□□ -0.15
VARS-216ENST00000428445 DPPA2Q7Z7J5 298 aa14.09□□□□□ -0.15
VARS-216ENST00000428445 SLC30A8Q8IWU4 369 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms