RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 RPS19BP1Q86WX3 136 aaKnown RBP9.35□□□□□ -0.91
HDAC9-210ENST00000428307 RDH10Q8IZV5 341 aa9.35□□□□□ -0.91
HDAC9-210ENST00000428307 SAMD12Q8N8I0 201 aa9.35□□□□□ -0.91
HDAC9-210ENST00000428307 NSMAFQ92636 917 aa9.35□□□□□ -0.91
HDAC9-210ENST00000428307 OR5B2Q96R09 309 aa9.35□□□□□ -0.91
HDAC9-210ENST00000428307 UBL7Q96S82 380 aaPredicted RBP9.35□□□□□ -0.91
HDAC9-210ENST00000428307 PTGES2Q9H7Z7 377 aa9.35□□□□□ -0.91
HDAC9-210ENST00000428307 SERINC1Q9NRX5 453 aa9.35□□□□□ -0.91
HDAC9-210ENST00000428307 MRPL22Q9NWU5 206 aaKnown RBP9.35□□□□□ -0.91
HDAC9-210ENST00000428307 SLCO1C1Q9NYB5 712 aa9.35□□□□□ -0.91
HDAC9-210ENST00000428307 TCFL5Q9UL49 500 aa9.35□□□□□ -0.91
HDAC9-210ENST00000428307 NPIPA1Q9UND3 350 aa9.35□□□□□ -0.91
HDAC9-210ENST00000428307 ZNF281Q9Y2X9 895 aa9.35□□□□□ -0.91
HDAC9-210ENST00000428307 IGLV1-36A0A0B4J1U3 117 aa9.34□□□□□ -0.91
HDAC9-210ENST00000428307 A0A0G2JK05 382 aa9.34□□□□□ -0.91
HDAC9-210ENST00000428307 ARL6IP5O75915 188 aa9.34□□□□□ -0.91
HDAC9-210ENST00000428307 THBS2P35442 1172 aa9.34□□□□□ -0.91
HDAC9-210ENST00000428307 ADAM8P78325 824 aa9.34□□□□□ -0.91
HDAC9-210ENST00000428307 HSF1Q00613 529 aa9.34□□□□□ -0.91
HDAC9-210ENST00000428307 SCN1BQ07699 218 aa9.34□□□□□ -0.91
HDAC9-210ENST00000428307 CDC20Q12834 499 aa9.34□□□□□ -0.91
HDAC9-210ENST00000428307 MFSD13AQ14CX5 517 aa9.34□□□□□ -0.91
HDAC9-210ENST00000428307 ZNF468Q5VIY5 522 aaPredicted RBP9.34□□□□□ -0.91
HDAC9-210ENST00000428307 C6orf15Q6UXA7 325 aaPredicted RBP9.34□□□□□ -0.91
HDAC9-210ENST00000428307 MDGA2Q7Z553 956 aa9.34□□□□□ -0.91
HDAC9-210ENST00000428307 GPAT4Q86UL3 456 aa9.34□□□□□ -0.91
HDAC9-210ENST00000428307 Q8N402 240 aa9.34□□□□□ -0.91
HDAC9-210ENST00000428307 GDPD1Q8N9F7 314 aa9.34□□□□□ -0.91
HDAC9-210ENST00000428307 OTOSQ8NHW6 89 aa9.34□□□□□ -0.91
HDAC9-210ENST00000428307 M1APQ8TC57 530 aa9.34□□□□□ -0.91
HDAC9-210ENST00000428307 RGP1Q92546 391 aaPredicted RBP9.34□□□□□ -0.91
HDAC9-210ENST00000428307 STRADBQ9C0K7 418 aa9.34□□□□□ -0.91
HDAC9-210ENST00000428307 PPP1R3EQ9H7J1 279 aa9.34□□□□□ -0.91
HDAC9-210ENST00000428307 CPNE5Q9HCH3 593 aa9.34□□□□□ -0.91
HDAC9-210ENST00000428307 CHST11Q9NPF2 352 aa9.34□□□□□ -0.91
HDAC9-210ENST00000428307 VSX1Q9NZR4 365 aaPredicted RBP9.34□□□□□ -0.91
HDAC9-210ENST00000428307 PCDHGB2Q9Y5G2 931 aa9.34□□□□□ -0.91
HDAC9-210ENST00000428307 PCDHGA5Q9Y5G8 931 aa9.34□□□□□ -0.91
HDAC9-210ENST00000428307 IGLV3-32A0A0A0MS00 114 aa9.34□□□□□ -0.91
HDAC9-210ENST00000428307 ETV2O00321 342 aaPredicted RBP9.34□□□□□ -0.91
HDAC9-210ENST00000428307 PIN1P1O15428 100 aa9.34□□□□□ -0.91
HDAC9-210ENST00000428307 ABHD16AO95870 558 aa9.34□□□□□ -0.91
HDAC9-210ENST00000428307 UCHL1P09936 223 aa9.34□□□□□ -0.91
HDAC9-210ENST00000428307 SRMP19623 302 aa9.34□□□□□ -0.91
HDAC9-210ENST00000428307 SOX2P48431 317 aa9.34□□□□□ -0.91
HDAC9-210ENST00000428307 SSR4P51571 173 aa9.34□□□□□ -0.91
HDAC9-210ENST00000428307 TMEM176BQ3YBM2 270 aaPredicted RBP9.34□□□□□ -0.91
HDAC9-210ENST00000428307 HSD17B12Q53GQ0 312 aa9.34□□□□□ -0.91
HDAC9-210ENST00000428307 AGAP7PQ5VUJ5 663 aa9.34□□□□□ -0.91
HDAC9-210ENST00000428307 PAMR1Q6UXH9 720 aa9.34□□□□□ -0.91
HDAC9-210ENST00000428307 TEX19Q8NA77 164 aa9.34□□□□□ -0.91
HDAC9-210ENST00000428307 OR5AK2Q8NH90 309 aa9.34□□□□□ -0.91
HDAC9-210ENST00000428307 ACOT12Q8WYK0 555 aa9.34□□□□□ -0.91
HDAC9-210ENST00000428307 MAP6Q96JE9 813 aa9.34□□□□□ -0.91
HDAC9-210ENST00000428307 NEDD4LQ96PU5 975 aa9.34□□□□□ -0.91
HDAC9-210ENST00000428307 POTEKPQ9BYX7 375 aa9.34□□□□□ -0.91
HDAC9-210ENST00000428307 SLC25A18Q9H1K4 315 aa9.34□□□□□ -0.91
HDAC9-210ENST00000428307 ELOVL3Q9HB03 270 aa9.34□□□□□ -0.91
HDAC9-210ENST00000428307 EXTL2Q9UBQ6 330 aa9.34□□□□□ -0.91
HDAC9-210ENST00000428307 TMEM14AQ9Y6G1 99 aa9.34□□□□□ -0.91
HDAC9-210ENST00000428307 EP300Q09472 2414 aaPredicted RBP9.33□□□□□ -0.92
HDAC9-210ENST00000428307 IGKV1D-43A0A0B4J1Z2 117 aa9.33□□□□□ -0.92
HDAC9-210ENST00000428307 ZNF879B4DU55 563 aa9.33□□□□□ -0.92
HDAC9-210ENST00000428307 GPRIN2O60269 458 aa9.33□□□□□ -0.92
HDAC9-210ENST00000428307 GATBO75879 557 aaKnown RBP9.33□□□□□ -0.92
HDAC9-210ENST00000428307 EIF4EP06730 217 aaKnown RBP9.33□□□□□ -0.92
HDAC9-210ENST00000428307 GLO1Q04760 184 aa9.33□□□□□ -0.92
HDAC9-210ENST00000428307 ALKBH1Q13686 389 aaKnown RBP9.33□□□□□ -0.92
HDAC9-210ENST00000428307 SLC25A53Q5H9E4 307 aa9.33□□□□□ -0.92
HDAC9-210ENST00000428307 CEP78Q5JTW2 689 aa9.33□□□□□ -0.92
HDAC9-210ENST00000428307 B3GNTL1Q67FW5 361 aaPredicted RBP9.33□□□□□ -0.92
HDAC9-210ENST00000428307 C3orf33Q6P1S2 294 aa9.33□□□□□ -0.92
HDAC9-210ENST00000428307 PPP1R32Q7Z5V6 425 aa9.33□□□□□ -0.92
HDAC9-210ENST00000428307 PLCZ1Q86YW0 608 aa9.33□□□□□ -0.92
HDAC9-210ENST00000428307 NAXDQ8IW45 347 aa9.33□□□□□ -0.92
HDAC9-210ENST00000428307 ZNF433Q8N7K0 673 aaPredicted RBP9.33□□□□□ -0.92
HDAC9-210ENST00000428307 CELF2-AS1Q8N7Q2 184 aa9.33□□□□□ -0.92
HDAC9-210ENST00000428307 SCAIQ8N9R8 606 aa9.33□□□□□ -0.92
HDAC9-210ENST00000428307 TRMT10AQ8TBZ6 339 aaKnown RBP9.33□□□□□ -0.92
HDAC9-210ENST00000428307 CT55Q8WUE5 264 aa9.33□□□□□ -0.92
HDAC9-210ENST00000428307 LOXL4Q96JB6 756 aa9.33□□□□□ -0.92
HDAC9-210ENST00000428307 HPF1Q9NWY4 346 aa9.33□□□□□ -0.92
HDAC9-210ENST00000428307 GTF2A1LQ9UNN4 478 aa9.33□□□□□ -0.92
HDAC9-210ENST00000428307 RALGAPA1Q6GYQ0 2036 aa9.33□□□□□ -0.92
HDAC9-210ENST00000428307 TRAV1-2A0A0B4J238 106 aa9.32□□□□□ -0.92
HDAC9-210ENST00000428307 A0A0G2JMP0 313 aa9.32□□□□□ -0.92
HDAC9-210ENST00000428307 A0A0X1KG70 313 aa9.32□□□□□ -0.92
HDAC9-210ENST00000428307 A0A1W2PNU3 283 aaPredicted RBP9.32□□□□□ -0.92
HDAC9-210ENST00000428307 FAM47E-STBD1D6RA91 191 aa9.32□□□□□ -0.92
HDAC9-210ENST00000428307 RAD1O60671 282 aa9.32□□□□□ -0.92
HDAC9-210ENST00000428307 IGHMP01871 453 aa9.32□□□□□ -0.92
HDAC9-210ENST00000428307 EPXP11678 715 aa9.32□□□□□ -0.92
HDAC9-210ENST00000428307 SNRPBP14678 240 aaKnown RBP9.32□□□□□ -0.92
HDAC9-210ENST00000428307 ATF1P18846 271 aa9.32□□□□□ -0.92
HDAC9-210ENST00000428307 KLK2P20151 261 aa9.32□□□□□ -0.92
HDAC9-210ENST00000428307 CRABP1P29762 137 aa9.32□□□□□ -0.92
HDAC9-210ENST00000428307 DAP3P51398 398 aaKnown RBP9.32□□□□□ -0.92
HDAC9-210ENST00000428307 BIDP55957 195 aa9.32□□□□□ -0.92
HDAC9-210ENST00000428307 DLX5P56178 289 aa9.32□□□□□ -0.92
HDAC9-210ENST00000428307 OR2B6P58173 313 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms