RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 ASB10Q8WXI3 467 aa15.88■□□□□ 0.13
PSPC1-202ENST00000427943 PRRC1Q96M27 445 aa15.88■□□□□ 0.13
PSPC1-202ENST00000427943 FOXN4Q96NZ1 517 aa15.88■□□□□ 0.13
PSPC1-202ENST00000427943 RAB1BQ9H0U4 201 aa15.88■□□□□ 0.13
PSPC1-202ENST00000427943 TPK1Q9H3S4 243 aa15.88■□□□□ 0.13
PSPC1-202ENST00000427943 MED4Q9NPJ6 270 aa15.88■□□□□ 0.13
PSPC1-202ENST00000427943 INIPQ9NRY2 104 aa15.88■□□□□ 0.13
PSPC1-202ENST00000427943 MED31Q9Y3C7 131 aa15.88■□□□□ 0.13
PSPC1-202ENST00000427943 CMAHPQ9Y471 501 aa15.88■□□□□ 0.13
PSPC1-202ENST00000427943 ANK3Q12955 4377 aaKnown RBP15.88■□□□□ 0.13
PSPC1-202ENST00000427943 IGFBP1P08833 259 aaPredicted RBP15.87■□□□□ 0.13
PSPC1-202ENST00000427943 OR8G3PP0DMU2 310 aa15.87■□□□□ 0.13
PSPC1-202ENST00000427943 ZNF35P13682 527 aa15.87■□□□□ 0.13
PSPC1-202ENST00000427943 FUT4P22083 530 aa15.87■□□□□ 0.13
PSPC1-202ENST00000427943 YAP1P46937 504 aaKnown RBP15.87■□□□□ 0.13
PSPC1-202ENST00000427943 SELENOWP63302 87 aa15.87■□□□□ 0.13
PSPC1-202ENST00000427943 LSM11P83369 360 aaKnown RBP eCLIP15.87■□□□□ 0.13
PSPC1-202ENST00000427943 LIPEQ05469 1076 aa15.87■□□□□ 0.13
PSPC1-202ENST00000427943 ARPINQ7Z6K5 226 aa15.87■□□□□ 0.13
PSPC1-202ENST00000427943 VTCN1Q7Z7D3 282 aa15.87■□□□□ 0.13
PSPC1-202ENST00000427943 HIPK1Q86Z02 1210 aa15.87■□□□□ 0.13
PSPC1-202ENST00000427943 SLC15A3Q8IY34 581 aa15.87■□□□□ 0.13
PSPC1-202ENST00000427943 SYT14Q8NB59 555 aa15.87■□□□□ 0.13
PSPC1-202ENST00000427943 OR4K5Q8NGD3 323 aa15.87■□□□□ 0.13
PSPC1-202ENST00000427943 MCHR2Q969V1 340 aa15.87■□□□□ 0.13
PSPC1-202ENST00000427943 MRPL24Q96A35 216 aaKnown RBP15.87■□□□□ 0.13
PSPC1-202ENST00000427943 MRPL37Q9BZE1 423 aaKnown RBP15.87■□□□□ 0.13
PSPC1-202ENST00000427943 DENND2DQ9H6A0 471 aaPredicted RBP15.87■□□□□ 0.13
PSPC1-202ENST00000427943 MYOZ1Q9NP98 299 aaPredicted RBP15.87■□□□□ 0.13
PSPC1-202ENST00000427943 RHCGQ9UBD6 479 aa15.87■□□□□ 0.13
PSPC1-202ENST00000427943 FZR1Q9UM11 496 aa15.87■□□□□ 0.13
PSPC1-202ENST00000427943 A4GNTQ9UNA3 340 aa15.87■□□□□ 0.13
PSPC1-202ENST00000427943 LOC390937A0A1W2PQ73 354 aa15.86■□□□□ 0.13
PSPC1-202ENST00000427943 NDUFS8O00217 210 aa15.86■□□□□ 0.13
PSPC1-202ENST00000427943 NME4O00746 187 aa15.86■□□□□ 0.13
PSPC1-202ENST00000427943 TRMUO75648 421 aaKnown RBP15.86■□□□□ 0.13
PSPC1-202ENST00000427943 THRBP10828 461 aa15.86■□□□□ 0.13
PSPC1-202ENST00000427943 DAP3P51398 398 aaKnown RBP15.86■□□□□ 0.13
PSPC1-202ENST00000427943 SLC7A2P52569 658 aa15.86■□□□□ 0.13
PSPC1-202ENST00000427943 GALK2Q01415 458 aa15.86■□□□□ 0.13
PSPC1-202ENST00000427943 GKAP1Q5VSY0 366 aaPredicted RBP15.86■□□□□ 0.13
PSPC1-202ENST00000427943 MEX3DQ86XN8 651 aaKnown RBP15.86■□□□□ 0.13
PSPC1-202ENST00000427943 TREML1Q86YW5 311 aa15.86■□□□□ 0.13
PSPC1-202ENST00000427943 MDFIQ99750 246 aa15.86■□□□□ 0.13
PSPC1-202ENST00000427943 SYT3Q9BQG1 590 aa15.86■□□□□ 0.13
PSPC1-202ENST00000427943 BPESC1Q9GZL8 116 aa15.86■□□□□ 0.13
PSPC1-202ENST00000427943 RNF121Q9H920 327 aa15.86■□□□□ 0.13
PSPC1-202ENST00000427943 SPEF1Q9Y4P9 236 aa15.86■□□□□ 0.13
PSPC1-202ENST00000427943 SNX13Q9Y5W8 968 aa15.86■□□□□ 0.13
PSPC1-202ENST00000427943 IGHV4-61A0A0C4DH41 118 aa15.85■□□□□ 0.13
PSPC1-202ENST00000427943 J3KTA2 159 aa15.85■□□□□ 0.13
PSPC1-202ENST00000427943 FARS2O95363 451 aaKnown RBP15.85■□□□□ 0.13
PSPC1-202ENST00000427943 SLC2A10O95528 541 aa15.85■□□□□ 0.13
PSPC1-202ENST00000427943 ZNF682O95780 498 aa15.85■□□□□ 0.13
PSPC1-202ENST00000427943 IGF2P01344 180 aa15.85■□□□□ 0.13
PSPC1-202ENST00000427943 ERCC1P07992 297 aaPredicted RBP15.85■□□□□ 0.13
PSPC1-202ENST00000427943 ADRA2AP08913 450 aa15.85■□□□□ 0.13
PSPC1-202ENST00000427943 IFI30P13284 250 aa15.85■□□□□ 0.13
PSPC1-202ENST00000427943 DAOP14920 347 aa15.85■□□□□ 0.13
PSPC1-202ENST00000427943 ACADSP16219 412 aa15.85■□□□□ 0.13
PSPC1-202ENST00000427943 ZNF84P51523 738 aa15.85■□□□□ 0.13
PSPC1-202ENST00000427943 ST3GAL3Q11203 375 aa15.85■□□□□ 0.13
PSPC1-202ENST00000427943 TOP3AQ13472 1001 aaPredicted RBP15.85■□□□□ 0.13
PSPC1-202ENST00000427943 LAPTM4AQ15012 233 aa15.85■□□□□ 0.13
PSPC1-202ENST00000427943 HIST3H3Q16695 136 aa15.85■□□□□ 0.13
PSPC1-202ENST00000427943 IQCCQ4KMZ1 466 aa15.85■□□□□ 0.13
PSPC1-202ENST00000427943 NEU4Q8WWR8 484 aaPredicted RBP15.85■□□□□ 0.13
PSPC1-202ENST00000427943 LIPHQ8WWY8 451 aa15.85■□□□□ 0.13
PSPC1-202ENST00000427943 LZICQ8WZA0 190 aa15.85■□□□□ 0.13
PSPC1-202ENST00000427943 KCNK17Q96T54 332 aa15.85■□□□□ 0.13
PSPC1-202ENST00000427943 MRPL13Q9BYD1 178 aaKnown RBP15.85■□□□□ 0.13
PSPC1-202ENST00000427943 OR51B6Q9H340 312 aa15.85■□□□□ 0.13
PSPC1-202ENST00000427943 FBXO9Q9UK97 447 aaPredicted RBP15.85■□□□□ 0.13
PSPC1-202ENST00000427943 FBXL3Q9UKT7 428 aa15.85■□□□□ 0.13
PSPC1-202ENST00000427943 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.85■□□□□ 0.13
PSPC1-202ENST00000427943 CXCR6O00574 342 aa15.84■□□□□ 0.13
PSPC1-202ENST00000427943 GSTA4O15217 222 aa15.84■□□□□ 0.13
PSPC1-202ENST00000427943 CCDC22O60826 627 aa15.84■□□□□ 0.13
PSPC1-202ENST00000427943 ENTPD5O75356 428 aa15.84■□□□□ 0.13
PSPC1-202ENST00000427943 SERPINA5P05154 406 aa15.84■□□□□ 0.13
PSPC1-202ENST00000427943 TSPAN19P0C672 248 aa15.84■□□□□ 0.13
PSPC1-202ENST00000427943 CCL2P13500 99 aa15.84■□□□□ 0.13
PSPC1-202ENST00000427943 APEHP13798 732 aaKnown RBP15.84■□□□□ 0.13
PSPC1-202ENST00000427943 LSP1P33241 339 aa15.84■□□□□ 0.13
PSPC1-202ENST00000427943 GLRXP35754 106 aa15.84■□□□□ 0.13
PSPC1-202ENST00000427943 NUDT2P50583 147 aa15.84■□□□□ 0.13
PSPC1-202ENST00000427943 FMODQ06828 376 aa15.84■□□□□ 0.13
PSPC1-202ENST00000427943 MAD2L1BPQ15013 274 aaPredicted RBP15.84■□□□□ 0.13
PSPC1-202ENST00000427943 FXNQ16595 210 aa15.84■□□□□ 0.13
PSPC1-202ENST00000427943 CHRFAM7AQ494W8 412 aa15.84■□□□□ 0.13
PSPC1-202ENST00000427943 ARMC4Q5T2S8 1044 aa15.84■□□□□ 0.13
PSPC1-202ENST00000427943 CYB5R2Q6BCY4 276 aa15.84■□□□□ 0.13
PSPC1-202ENST00000427943 TMEM53Q6P2H8 277 aa15.84■□□□□ 0.13
PSPC1-202ENST00000427943 SLC16A14Q7RTX9 510 aa15.84■□□□□ 0.13
PSPC1-202ENST00000427943 HDDC2Q7Z4H3 204 aa15.84■□□□□ 0.13
PSPC1-202ENST00000427943 IGFN1Q86VF2 1251 aa15.84■□□□□ 0.13
PSPC1-202ENST00000427943 LRP11Q86VZ4 500 aa15.84■□□□□ 0.13
PSPC1-202ENST00000427943 LRRC18Q8N456 261 aa15.84■□□□□ 0.13
PSPC1-202ENST00000427943 HDAC2Q92769 488 aaKnown RBP15.84■□□□□ 0.13
PSPC1-202ENST00000427943 BPIFA2Q96DR5 249 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms