RNA–Protein interactions for RNA: ENST00000427231.6

NEB-209, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-209ENST00000427231 PITX2Q99697 317 aa2.35□□□□□ -2.03
NEB-209ENST00000427231 RTP3Q9BQQ7 232 aa2.35□□□□□ -2.03
NEB-209ENST00000427231 IL3RAP26951 378 aa2.35□□□□□ -2.03
NEB-209ENST00000427231 OR12D2P58182 307 aa2.35□□□□□ -2.03
NEB-209ENST00000427231 SPIBQ01892 262 aa2.35□□□□□ -2.03
NEB-209ENST00000427231 LMAN2Q12907 356 aa2.35□□□□□ -2.03
NEB-209ENST00000427231 OR8B8Q15620 311 aa2.35□□□□□ -2.03
NEB-209ENST00000427231 BSXQ3C1V8 233 aa2.35□□□□□ -2.03
NEB-209ENST00000427231 TOR2AQ5JU69 321 aa2.35□□□□□ -2.03
NEB-209ENST00000427231 PAPPA-AS1Q5QFB9 102 aa2.35□□□□□ -2.03
NEB-209ENST00000427231 ETFBKMTQ8IXQ9 262 aa2.35□□□□□ -2.03
NEB-209ENST00000427231 C19orf47Q8N9M1 422 aaKnown RBP2.35□□□□□ -2.03
NEB-209ENST00000427231 GJC3Q8NFK1 279 aa2.35□□□□□ -2.03
NEB-209ENST00000427231 ST6GAL2Q96JF0 529 aa2.35□□□□□ -2.03
NEB-209ENST00000427231 PRRC1Q96M27 445 aa2.35□□□□□ -2.03
NEB-209ENST00000427231 INTS14Q96SY0 518 aa2.35□□□□□ -2.03
NEB-209ENST00000427231 C20orf85Q9H1P6 137 aa2.35□□□□□ -2.03
NEB-209ENST00000427231 UBQLN3Q9H347 655 aa2.35□□□□□ -2.03
NEB-209ENST00000427231 ZBTB20Q9HC78 741 aaPredicted RBP2.35□□□□□ -2.03
NEB-209ENST00000427231 ZCCHC3Q9NUD5 404 aaKnown RBP2.35□□□□□ -2.03
NEB-209ENST00000427231 A0A1W2PQ09 198 aa2.35□□□□□ -2.03
NEB-209ENST00000427231 CXorf49A8MYA2 514 aaPredicted RBP2.35□□□□□ -2.03
NEB-209ENST00000427231 ZNF207O43670 478 aaKnown RBP2.35□□□□□ -2.03
NEB-209ENST00000427231 NGFRP08138 427 aa2.35□□□□□ -2.03
NEB-209ENST00000427231 POU3F2P20265 443 aaPredicted RBP2.35□□□□□ -2.03
NEB-209ENST00000427231 NPY4RP50391 375 aa2.35□□□□□ -2.03
NEB-209ENST00000427231 ATP1B3P54709 279 aa2.35□□□□□ -2.03
NEB-209ENST00000427231 FOXO1Q12778 655 aa2.35□□□□□ -2.03
NEB-209ENST00000427231 LEMD1Q68G75 181 aa2.35□□□□□ -2.03
NEB-209ENST00000427231 C22orf42Q6IC83 251 aa2.35□□□□□ -2.03
NEB-209ENST00000427231 ZNF627Q7L945 461 aa2.35□□□□□ -2.03
NEB-209ENST00000427231 ACOT1Q86TX2 421 aa2.35□□□□□ -2.03
NEB-209ENST00000427231 LCN9Q8WX39 176 aa2.35□□□□□ -2.03
NEB-209ENST00000427231 DCUN1D4Q92564 292 aa2.35□□□□□ -2.03
NEB-209ENST00000427231 FAM46BQ96A09 425 aa2.35□□□□□ -2.03
NEB-209ENST00000427231 BORCS7Q96B45 105 aa2.35□□□□□ -2.03
NEB-209ENST00000427231 SHISA4Q96DD7 197 aa2.35□□□□□ -2.03
NEB-209ENST00000427231 FOXJ2Q9P0K8 574 aa2.35□□□□□ -2.03
NEB-209ENST00000427231 TMEM233B4DJY2 109 aa2.35□□□□□ -2.03
NEB-209ENST00000427231 CST3P01034 146 aaPredicted RBP2.35□□□□□ -2.03
NEB-209ENST00000427231 AKR1C4P17516 323 aa2.35□□□□□ -2.03
NEB-209ENST00000427231 TIA1P31483 386 aaKnown RBP eCLIP2.35□□□□□ -2.03
NEB-209ENST00000427231 APOBEC1P41238 236 aaKnown RBP2.35□□□□□ -2.03
NEB-209ENST00000427231 TAS2R45P59539 299 aa2.35□□□□□ -2.03
NEB-209ENST00000427231 ERVK-16P61578 105 aa2.35□□□□□ -2.03
NEB-209ENST00000427231 EXOSC2Q13868 293 aaKnown RBP2.35□□□□□ -2.03
NEB-209ENST00000427231 MPV17LQ2QL34 196 aa2.35□□□□□ -2.03
NEB-209ENST00000427231 TCEAL8Q8IYN2 117 aa2.35□□□□□ -2.03
NEB-209ENST00000427231 GABRG1Q8N1C3 465 aa2.35□□□□□ -2.03
NEB-209ENST00000427231 WFDC12Q8WWY7 111 aa2.35□□□□□ -2.03
NEB-209ENST00000427231 PACRGQ96M98 296 aaPredicted RBP2.35□□□□□ -2.03
NEB-209ENST00000427231 OPALINQ96PE5 141 aa2.35□□□□□ -2.03
NEB-209ENST00000427231 TSPAN10Q9H1Z9 355 aaPredicted RBP2.35□□□□□ -2.03
NEB-209ENST00000427231 ZMIZ1Q9ULJ6 1067 aa2.35□□□□□ -2.03
NEB-209ENST00000427231 FLVCR2Q9UPI3 526 aa2.35□□□□□ -2.03
NEB-209ENST00000427231 A0A0U1RQK1 487 aa2.35□□□□□ -2.03
NEB-209ENST00000427231 FBXO24O75426 580 aa2.35□□□□□ -2.03
NEB-209ENST00000427231 PSMB4P28070 264 aa2.35□□□□□ -2.03
NEB-209ENST00000427231 UCP2P55851 309 aa2.35□□□□□ -2.03
NEB-209ENST00000427231 WDR5P61964 334 aaKnown RBP2.35□□□□□ -2.03
NEB-209ENST00000427231 RAC1P63000 192 aa2.35□□□□□ -2.03
NEB-209ENST00000427231 ZNF675Q8TD23 568 aa2.35□□□□□ -2.03
NEB-209ENST00000427231 GPBAR1Q8TDU6 330 aa2.35□□□□□ -2.03
NEB-209ENST00000427231 MR1Q95460 341 aa2.35□□□□□ -2.03
NEB-209ENST00000427231 SCLYQ96I15 445 aa2.35□□□□□ -2.03
NEB-209ENST00000427231 ANKRD20A5PA0PJZ0 165 aa2.35□□□□□ -2.03
NEB-209ENST00000427231 ARPC1BO15143 372 aaKnown RBP2.35□□□□□ -2.03
NEB-209ENST00000427231 ERI3O43414 337 aaKnown RBP2.35□□□□□ -2.03
NEB-209ENST00000427231 SLC10A6Q3KNW5 377 aa2.35□□□□□ -2.03
NEB-209ENST00000427231 SLC16A9Q7RTY1 509 aa2.35□□□□□ -2.03
NEB-209ENST00000427231 DTWD1Q8N5C7 304 aa2.35□□□□□ -2.03
NEB-209ENST00000427231 LMNTD1Q8N9Z9 388 aa2.35□□□□□ -2.03
NEB-209ENST00000427231 ZNF563Q8TA94 476 aa2.35□□□□□ -2.03
NEB-209ENST00000427231 NEU3Q9UQ49 428 aa2.35□□□□□ -2.03
NEB-209ENST00000427231 NOTCH3Q9UM47 2321 aa2.35□□□□□ -2.03
NEB-209ENST00000427231 HSD17B6O14756 317 aa2.35□□□□□ -2.03
NEB-209ENST00000427231 KLK8O60259 260 aa2.35□□□□□ -2.03
NEB-209ENST00000427231 ZNF16P17020 682 aaPredicted RBP2.35□□□□□ -2.03
NEB-209ENST00000427231 SLC25A11Q02978 314 aaKnown RBP2.35□□□□□ -2.03
NEB-209ENST00000427231 SMN1Q16637 294 aaKnown RBP2.35□□□□□ -2.03
NEB-209ENST00000427231 KLHDC8AQ8IYD2 350 aa2.35□□□□□ -2.03
NEB-209ENST00000427231 IKZF4Q9H2S9 585 aa2.35□□□□□ -2.03
NEB-209ENST00000427231 POMKQ9H5K3 350 aa2.35□□□□□ -2.03
NEB-209ENST00000427231 FREM1Q5H8C1 2179 aa2.35□□□□□ -2.03
NEB-209ENST00000427231 IDSB3KWA1 339 aa2.35□□□□□ -2.03
NEB-209ENST00000427231 GPANK1O95872 356 aa2.35□□□□□ -2.03
NEB-209ENST00000427231 ANXA4P09525 319 aaPredicted RBP2.35□□□□□ -2.03
NEB-209ENST00000427231 RRASP10301 218 aa2.35□□□□□ -2.03
NEB-209ENST00000427231 ZNF26P17031 533 aaPredicted RBP2.35□□□□□ -2.03
NEB-209ENST00000427231 DPP4P27487 766 aa2.35□□□□□ -2.03
NEB-209ENST00000427231 APEX1P27695 318 aaKnown RBP2.35□□□□□ -2.03
NEB-209ENST00000427231 RAB7AP51149 207 aa2.35□□□□□ -2.03
NEB-209ENST00000427231 RPL23AP62750 156 aaKnown RBP2.35□□□□□ -2.03
NEB-209ENST00000427231 ACSM3Q53FZ2 586 aa2.35□□□□□ -2.03
NEB-209ENST00000427231 LHFPL2Q6ZUX7 228 aa2.35□□□□□ -2.03
NEB-209ENST00000427231 PXT1Q8NFP0 134 aa2.35□□□□□ -2.03
NEB-209ENST00000427231 ZNF251Q9BRH9 671 aa2.35□□□□□ -2.03
NEB-209ENST00000427231 NME7Q9Y5B8 376 aa2.35□□□□□ -2.03
NEB-209ENST00000427231 IQCF6A8MYZ5 107 aa2.35□□□□□ -2.03
NEB-209ENST00000427231 CD1DP15813 335 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms