RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 STAG3L2P0CL84 134 aa13.36□□□□□ -0.27
PTPN13-203ENST00000427191 P2RY2P41231 377 aa13.36□□□□□ -0.27
PTPN13-203ENST00000427191 APCDD1Q8J025 514 aa13.36□□□□□ -0.27
PTPN13-203ENST00000427191 TECTBQ96PL2 329 aa13.36□□□□□ -0.27
PTPN13-203ENST00000427191 MBOAT4Q96T53 435 aa13.36□□□□□ -0.27
PTPN13-203ENST00000427191 C1QBP02746 253 aa13.36□□□□□ -0.27
PTPN13-203ENST00000427191 NOSIPQ9Y314 301 aaKnown RBP13.36□□□□□ -0.27
PTPN13-203ENST00000427191 PRSS38A1L453 326 aa13.36□□□□□ -0.27
PTPN13-203ENST00000427191 BRI3BPQ8WY22 251 aa13.36□□□□□ -0.27
PTPN13-203ENST00000427191 BOCQ9BWV1 1114 aa13.36□□□□□ -0.27
PTPN13-203ENST00000427191 DLL4Q9NR61 685 aa13.36□□□□□ -0.27
PTPN13-203ENST00000427191 SLC2A8Q9NY64 477 aa13.36□□□□□ -0.27
PTPN13-203ENST00000427191 NDRG4Q9ULP0 352 aaKnown RBP13.36□□□□□ -0.27
PTPN13-203ENST00000427191 ZFP92A6NM28 416 aa13.36□□□□□ -0.27
PTPN13-203ENST00000427191 ZNF814B7Z6K7 855 aa13.36□□□□□ -0.27
PTPN13-203ENST00000427191 PNPP00491 289 aa13.36□□□□□ -0.27
PTPN13-203ENST00000427191 EDN1P05305 212 aa13.36□□□□□ -0.27
PTPN13-203ENST00000427191 RPL7L1Q6DKI1 246 aaKnown RBP13.36□□□□□ -0.27
PTPN13-203ENST00000427191 CRLF2Q9HC73 371 aa13.36□□□□□ -0.27
PTPN13-203ENST00000427191 C5AR2Q9P296 337 aa13.36□□□□□ -0.27
PTPN13-203ENST00000427191 POLDIP2Q9Y2S7 368 aa13.36□□□□□ -0.27
PTPN13-203ENST00000427191 PCM1Q15154 2024 aa13.36□□□□□ -0.27
PTPN13-203ENST00000427191 RAD1O60671 282 aa13.35□□□□□ -0.27
PTPN13-203ENST00000427191 DCAF12Q5T6F0 453 aa13.35□□□□□ -0.27
PTPN13-203ENST00000427191 GDPD3Q7L5L3 318 aa13.35□□□□□ -0.27
PTPN13-203ENST00000427191 TMEM178AQ8NBL3 297 aa13.35□□□□□ -0.27
PTPN13-203ENST00000427191 DPF1Q92782 380 aa13.35□□□□□ -0.27
PTPN13-203ENST00000427191 GPR55Q9Y2T6 319 aaPredicted RBP13.35□□□□□ -0.27
PTPN13-203ENST00000427191 SLC9B1P1A6NJY1 282 aa13.35□□□□□ -0.27
PTPN13-203ENST00000427191 ASAH1Q13510 395 aa13.35□□□□□ -0.27
PTPN13-203ENST00000427191 SIAH3Q8IW03 269 aa13.35□□□□□ -0.27
PTPN13-203ENST00000427191 SLC24A4Q8NFF2 622 aa13.35□□□□□ -0.27
PTPN13-203ENST00000427191 TMIGD2Q96BF3 282 aa13.35□□□□□ -0.27
PTPN13-203ENST00000427191 PLK3Q9H4B4 646 aa13.35□□□□□ -0.27
PTPN13-203ENST00000427191 NCBP2LA6PVI3 153 aaKnown RBP13.35□□□□□ -0.27
PTPN13-203ENST00000427191 UMAD1C9J7I0 102 aa13.35□□□□□ -0.27
PTPN13-203ENST00000427191 SQSTM1Q13501 440 aa13.35□□□□□ -0.27
PTPN13-203ENST00000427191 OR52E1Q8NGJ3 308 aa13.35□□□□□ -0.27
PTPN13-203ENST00000427191 PLEKHA2Q9HB19 425 aa13.35□□□□□ -0.27
PTPN13-203ENST00000427191 ST8SIA5O15466 376 aa13.35□□□□□ -0.27
PTPN13-203ENST00000427191 AP1G1O43747 822 aa13.35□□□□□ -0.27
PTPN13-203ENST00000427191 CNIH1O95406 144 aa13.35□□□□□ -0.27
PTPN13-203ENST00000427191 PDGFBP01127 241 aaPredicted RBP13.35□□□□□ -0.27
PTPN13-203ENST00000427191 OR5B3Q8NH48 314 aa13.35□□□□□ -0.27
PTPN13-203ENST00000427191 RGPD5Q99666 1765 aa13.35□□□□□ -0.27
PTPN13-203ENST00000427191 RNF186Q9NXI6 227 aa13.35□□□□□ -0.27
PTPN13-203ENST00000427191 KCNG2Q9UJ96 466 aa13.35□□□□□ -0.27
PTPN13-203ENST00000427191 GSX2Q9BZM3 304 aa13.35□□□□□ -0.27
PTPN13-203ENST00000427191 RAB18Q9NP72 206 aa13.35□□□□□ -0.27
PTPN13-203ENST00000427191 LTBP3Q9NS15 1303 aa13.35□□□□□ -0.27
PTPN13-203ENST00000427191 FAM183AA6NL82 134 aa13.35□□□□□ -0.27
PTPN13-203ENST00000427191 ICMTO60725 284 aa13.35□□□□□ -0.27
PTPN13-203ENST00000427191 ABHD16AO95870 558 aa13.35□□□□□ -0.27
PTPN13-203ENST00000427191 TESK1Q15569 626 aa13.35□□□□□ -0.27
PTPN13-203ENST00000427191 DOK3Q7L591 496 aa13.35□□□□□ -0.27
PTPN13-203ENST00000427191 AAED1Q7RTV5 226 aa13.35□□□□□ -0.27
PTPN13-203ENST00000427191 PIWIL3Q7Z3Z3 882 aaKnown RBP13.35□□□□□ -0.27
PTPN13-203ENST00000427191 B3GALT5Q9Y2C3 310 aa13.35□□□□□ -0.27
PTPN13-203ENST00000427191 SERINC4A6NH21 518 aa13.35□□□□□ -0.27
PTPN13-203ENST00000427191 LIPCP11150 499 aa13.35□□□□□ -0.27
PTPN13-203ENST00000427191 JUNBP17275 347 aaPredicted RBP13.35□□□□□ -0.27
PTPN13-203ENST00000427191 CD70P32970 193 aa13.35□□□□□ -0.27
PTPN13-203ENST00000427191 ZXDBP98169 803 aa13.35□□□□□ -0.27
PTPN13-203ENST00000427191 TPBGQ13641 420 aa13.35□□□□□ -0.27
PTPN13-203ENST00000427191 COL13A1Q5TAT6 717 aaPredicted RBP13.35□□□□□ -0.27
PTPN13-203ENST00000427191 UQCC3Q6UW78 93 aa13.35□□□□□ -0.27
PTPN13-203ENST00000427191 ZNF836Q6ZNA1 936 aa13.35□□□□□ -0.27
PTPN13-203ENST00000427191 NLGN4YQ8NFZ3 816 aaPredicted RBP13.35□□□□□ -0.27
PTPN13-203ENST00000427191 NUDT22Q9BRQ3 303 aa13.35□□□□□ -0.27
PTPN13-203ENST00000427191 NIT2Q9NQR4 276 aa13.35□□□□□ -0.27
PTPN13-203ENST00000427191 PMPCAQ10713 525 aa13.34□□□□□ -0.27
PTPN13-203ENST00000427191 EXT1Q16394 746 aa13.34□□□□□ -0.27
PTPN13-203ENST00000427191 STACQ99469 402 aa13.34□□□□□ -0.27
PTPN13-203ENST00000427191 FAM173AQ9BQD7 235 aa13.34□□□□□ -0.27
PTPN13-203ENST00000427191 TGIF2Q9GZN2 237 aa13.34□□□□□ -0.27
PTPN13-203ENST00000427191 MED9Q9NWA0 146 aa13.34□□□□□ -0.27
PTPN13-203ENST00000427191 NDUFB11Q9NX14 153 aa13.34□□□□□ -0.27
PTPN13-203ENST00000427191 MTCH1Q9NZJ7 389 aa13.34□□□□□ -0.27
PTPN13-203ENST00000427191 F3P13726 295 aa13.34□□□□□ -0.27
PTPN13-203ENST00000427191 COMMD1Q8N668 190 aa13.34□□□□□ -0.27
PTPN13-203ENST00000427191 OR51A4Q8NGJ6 313 aa13.34□□□□□ -0.27
PTPN13-203ENST00000427191 CA14Q9ULX7 337 aa13.34□□□□□ -0.27
PTPN13-203ENST00000427191 RGPD1P0DJD0 1748 aa13.34□□□□□ -0.27
PTPN13-203ENST00000427191 NWD2Q9ULI1 1742 aa13.34□□□□□ -0.27
PTPN13-203ENST00000427191 TMEM129A0AVI4 362 aa13.34□□□□□ -0.27
PTPN13-203ENST00000427191 CIDEAO60543 219 aa13.34□□□□□ -0.27
PTPN13-203ENST00000427191 IQCF3P0C7M6 154 aa13.34□□□□□ -0.27
PTPN13-203ENST00000427191 PDZK1IP1Q13113 114 aa13.34□□□□□ -0.27
PTPN13-203ENST00000427191 CTU2Q2VPK5 515 aaKnown RBP13.34□□□□□ -0.27
PTPN13-203ENST00000427191 ADIPOR2Q86V24 386 aa13.34□□□□□ -0.27
PTPN13-203ENST00000427191 LRRC18Q8N456 261 aa13.34□□□□□ -0.27
PTPN13-203ENST00000427191 OR13C2Q8NGS9 318 aa13.34□□□□□ -0.27
PTPN13-203ENST00000427191 FER1L6-AS2Q96M78 137 aa13.34□□□□□ -0.27
PTPN13-203ENST00000427191 GYPBP06028 91 aa13.34□□□□□ -0.27
PTPN13-203ENST00000427191 SMIM17P0DL12 118 aa13.34□□□□□ -0.27
PTPN13-203ENST00000427191 LYSMD4Q5XG99 296 aa13.34□□□□□ -0.27
PTPN13-203ENST00000427191 PTRH1Q86Y79 214 aaKnown RBP13.34□□□□□ -0.27
PTPN13-203ENST00000427191 AK3Q9UIJ7 227 aa13.34□□□□□ -0.27
PTPN13-203ENST00000427191 NSG2Q9Y328 171 aa13.34□□□□□ -0.27
PTPN13-203ENST00000427191 DDX60Q8IY21 1712 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms