RNA–Protein interactions for RNA: ENST00000425876.6

CDK3-201, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK3, Length 1,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-201ENST00000425876 B3GALT5-AS1P59052 145 aa12.9□□□□□ -0.34
CDK3-201ENST00000425876 CSNK2A1P68400 391 aaPredicted RBP12.9□□□□□ -0.34
CDK3-201ENST00000425876 SIRPAP78324 504 aa12.9□□□□□ -0.34
CDK3-201ENST00000425876 RUNX1T1Q06455 604 aa12.9□□□□□ -0.34
CDK3-201ENST00000425876 FOXO1Q12778 655 aa12.9□□□□□ -0.34
CDK3-201ENST00000425876 HSPB2Q16082 182 aa12.9□□□□□ -0.34
CDK3-201ENST00000425876 TP53I3Q53FA7 332 aa12.9□□□□□ -0.34
CDK3-201ENST00000425876 RPL22L1Q6P5R6 122 aaKnown RBP12.9□□□□□ -0.34
CDK3-201ENST00000425876 RELTQ969Z4 430 aa12.9□□□□□ -0.34
CDK3-201ENST00000425876 FAM173AQ9BQD7 235 aa12.9□□□□□ -0.34
CDK3-201ENST00000425876 TMED9Q9BVK6 235 aa12.9□□□□□ -0.34
CDK3-201ENST00000425876 OR2B2Q9GZK3 357 aa12.9□□□□□ -0.34
CDK3-201ENST00000425876 WDR12Q9GZL7 423 aaKnown RBP12.9□□□□□ -0.34
CDK3-201ENST00000425876 KCNN2Q9H2S1 579 aa12.9□□□□□ -0.34
CDK3-201ENST00000425876 AKIP1Q9NQ31 210 aa12.9□□□□□ -0.34
CDK3-201ENST00000425876 DEPPQ9NTK1 212 aa12.9□□□□□ -0.34
CDK3-201ENST00000425876 ST6GALNAC2Q9UJ37 374 aa12.9□□□□□ -0.34
CDK3-201ENST00000425876 ALPK2Q86TB3 2170 aa12.9□□□□□ -0.34
CDK3-201ENST00000425876 CNOT1A5YKK6 2376 aaKnown RBP12.9□□□□□ -0.34
CDK3-201ENST00000425876 MED19A0JLT2 244 aaPredicted RBP12.9□□□□□ -0.35
CDK3-201ENST00000425876 TRAF3IP2O43734 574 aaPredicted RBP12.9□□□□□ -0.35
CDK3-201ENST00000425876 SULT1C4O75897 302 aa12.9□□□□□ -0.35
CDK3-201ENST00000425876 RGS9O75916 674 aaPredicted RBP12.9□□□□□ -0.35
CDK3-201ENST00000425876 VAMP5O95183 116 aa12.9□□□□□ -0.35
CDK3-201ENST00000425876 ALOX5APP20292 161 aa12.9□□□□□ -0.35
CDK3-201ENST00000425876 PTGS2P35354 604 aa12.9□□□□□ -0.35
CDK3-201ENST00000425876 RORCP51449 518 aa12.9□□□□□ -0.35
CDK3-201ENST00000425876 GLO1Q04760 184 aa12.9□□□□□ -0.35
CDK3-201ENST00000425876 EGR3Q06889 387 aa12.9□□□□□ -0.35
CDK3-201ENST00000425876 ZNF846Q147U1 533 aa12.9□□□□□ -0.35
CDK3-201ENST00000425876 CDK5R1Q15078 307 aa12.9□□□□□ -0.35
CDK3-201ENST00000425876 TGIF1Q15583 401 aa12.9□□□□□ -0.35
CDK3-201ENST00000425876 TMEM225Q6GV28 225 aa12.9□□□□□ -0.35
CDK3-201ENST00000425876 ASB18Q6ZVZ8 466 aa12.9□□□□□ -0.35
CDK3-201ENST00000425876 GALNT16Q8N428 558 aa12.9□□□□□ -0.35
CDK3-201ENST00000425876 OTOSQ8NHW6 89 aa12.9□□□□□ -0.35
CDK3-201ENST00000425876 RPS4Y2Q8TD47 263 aa12.9□□□□□ -0.35
CDK3-201ENST00000425876 PGLYRP3Q96LB9 341 aa12.9□□□□□ -0.35
CDK3-201ENST00000425876 ADAD1Q96M93 576 aaKnown RBP12.9□□□□□ -0.35
CDK3-201ENST00000425876 MRPL13Q9BYD1 178 aaKnown RBP12.9□□□□□ -0.35
CDK3-201ENST00000425876 SLC24A3Q9HC58 644 aa12.9□□□□□ -0.35
CDK3-201ENST00000425876 PALMDQ9NP74 551 aa12.9□□□□□ -0.35
CDK3-201ENST00000425876 GALNT8Q9NY28 637 aa12.9□□□□□ -0.35
CDK3-201ENST00000425876 LAMP5Q9UJQ1 280 aa12.9□□□□□ -0.35
CDK3-201ENST00000425876 GNG8Q9UK08 70 aa12.9□□□□□ -0.35
CDK3-201ENST00000425876 TVP23AA6NH52 213 aa12.89□□□□□ -0.35
CDK3-201ENST00000425876 LINC01387J3KSC0 135 aa12.89□□□□□ -0.35
CDK3-201ENST00000425876 LRRTM2O43300 516 aa12.89□□□□□ -0.35
CDK3-201ENST00000425876 GPRIN2O60269 458 aa12.89□□□□□ -0.35
CDK3-201ENST00000425876 CDRT1O95170 752 aa12.89□□□□□ -0.35
CDK3-201ENST00000425876 OPN1LWP04000 364 aa12.89□□□□□ -0.35
CDK3-201ENST00000425876 AGFG1P52594 562 aaKnown RBP12.89□□□□□ -0.35
CDK3-201ENST00000425876 POU4F3Q15319 338 aa12.89□□□□□ -0.35
CDK3-201ENST00000425876 OR1C1Q15619 314 aa12.89□□□□□ -0.35
CDK3-201ENST00000425876 SPINK14Q6IE38 97 aa12.89□□□□□ -0.35
CDK3-201ENST00000425876 ARL9Q6T311 187 aa12.89□□□□□ -0.35
CDK3-201ENST00000425876 TMEM91Q6ZNR0 172 aa12.89□□□□□ -0.35
CDK3-201ENST00000425876 FAM83FQ8NEG4 500 aaPredicted RBP12.89□□□□□ -0.35
CDK3-201ENST00000425876 OR6N2Q8NGY6 317 aa12.89□□□□□ -0.35
CDK3-201ENST00000425876 OR6X1Q8NH79 312 aa12.89□□□□□ -0.35
CDK3-201ENST00000425876 FNDC8Q8TC99 324 aa12.89□□□□□ -0.35
CDK3-201ENST00000425876 ASB17Q8WXJ9 295 aa12.89□□□□□ -0.35
CDK3-201ENST00000425876 SLC25A46Q96AG3 418 aa12.89□□□□□ -0.35
CDK3-201ENST00000425876 SMIM19Q96E16 107 aa12.89□□□□□ -0.35
CDK3-201ENST00000425876 SLC25A44Q96H78 314 aaPredicted RBP12.89□□□□□ -0.35
CDK3-201ENST00000425876 TXNDC15Q96J42 360 aa12.89□□□□□ -0.35
CDK3-201ENST00000425876 RBP7Q96R05 134 aa12.89□□□□□ -0.35
CDK3-201ENST00000425876 NAA11Q9BSU3 229 aaPredicted RBP12.89□□□□□ -0.35
CDK3-201ENST00000425876 HDHD5Q9BXW7 423 aa12.89□□□□□ -0.35
CDK3-201ENST00000425876 MFRPQ9BY79 579 aa12.89□□□□□ -0.35
CDK3-201ENST00000425876 RNF32Q9H0A6 362 aa12.89□□□□□ -0.35
CDK3-201ENST00000425876 RERGLQ9H628 205 aa12.89□□□□□ -0.35
CDK3-201ENST00000425876 MED29Q9NX70 200 aa12.89□□□□□ -0.35
CDK3-201ENST00000425876 CRNNQ9UBG3 495 aaPredicted RBP12.89□□□□□ -0.35
CDK3-201ENST00000425876 PEX16Q9Y5Y5 336 aa12.89□□□□□ -0.35
CDK3-201ENST00000425876 PTPRBP23467 1997 aa12.88□□□□□ -0.35
CDK3-201ENST00000425876 KHDRBS3O75525 346 aaKnown RBP12.88□□□□□ -0.35
CDK3-201ENST00000425876 SC5DO75845 299 aa12.88□□□□□ -0.35
CDK3-201ENST00000425876 WDPCPO95876 746 aa12.88□□□□□ -0.35
CDK3-201ENST00000425876 SERPINA3P01011 423 aa12.88□□□□□ -0.35
CDK3-201ENST00000425876 HRGP04196 525 aa12.88□□□□□ -0.35
CDK3-201ENST00000425876 RFPL3SP0C7P2 107 aa12.88□□□□□ -0.35
CDK3-201ENST00000425876 ZNF43P17038 809 aa12.88□□□□□ -0.35
CDK3-201ENST00000425876 BIDP55957 195 aa12.88□□□□□ -0.35
CDK3-201ENST00000425876 RTP5Q14D33 572 aa12.88□□□□□ -0.35
CDK3-201ENST00000425876 TEX30Q5JUR7 227 aa12.88□□□□□ -0.35
CDK3-201ENST00000425876 THEM4Q5T1C6 240 aa12.88□□□□□ -0.35
CDK3-201ENST00000425876 DPY19L4Q7Z388 723 aa12.88□□□□□ -0.35
CDK3-201ENST00000425876 FAM220AQ7Z4H9 259 aa12.88□□□□□ -0.35
CDK3-201ENST00000425876 MFSD4AQ8N468 514 aa12.88□□□□□ -0.35
CDK3-201ENST00000425876 ZNF454Q8N9F8 522 aa12.88□□□□□ -0.35
CDK3-201ENST00000425876 OR2M7Q8NG81 312 aa12.88□□□□□ -0.35
CDK3-201ENST00000425876 OR14L1PQ8NHC6 308 aa12.88□□□□□ -0.35
CDK3-201ENST00000425876 GHSRQ92847 366 aa12.88□□□□□ -0.35
CDK3-201ENST00000425876 SIGLEC12Q96PQ1 595 aa12.88□□□□□ -0.35
CDK3-201ENST00000425876 BARHL1Q9BZE3 327 aa12.88□□□□□ -0.35
CDK3-201ENST00000425876 ACOXLQ9NUZ1 547 aa12.88□□□□□ -0.35
CDK3-201ENST00000425876 MRPL22Q9NWU5 206 aaKnown RBP12.88□□□□□ -0.35
CDK3-201ENST00000425876 KLHL9Q9P2J3 617 aa12.88□□□□□ -0.35
CDK3-201ENST00000425876 IQCMA0A1B0GVH7 501 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms