RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 NKX2-8O15522 239 aa13.58□□□□□ -0.24
ACTB-204ENST00000425660 VAMP5O95183 116 aa13.58□□□□□ -0.24
ACTB-204ENST00000425660 CD1AP06126 327 aa13.58□□□□□ -0.24
ACTB-204ENST00000425660 ALOX5APP20292 161 aa13.58□□□□□ -0.24
ACTB-204ENST00000425660 PTGS2P35354 604 aa13.58□□□□□ -0.24
ACTB-204ENST00000425660 GFRA1P56159 465 aa13.58□□□□□ -0.24
ACTB-204ENST00000425660 POU4F3Q15319 338 aa13.58□□□□□ -0.24
ACTB-204ENST00000425660 TOMM20Q15388 145 aa13.58□□□□□ -0.24
ACTB-204ENST00000425660 CCDC58Q4VC31 144 aa13.58□□□□□ -0.24
ACTB-204ENST00000425660 TMEM225Q6GV28 225 aa13.58□□□□□ -0.24
ACTB-204ENST00000425660 HDDC2Q7Z4H3 204 aa13.58□□□□□ -0.24
ACTB-204ENST00000425660 KCTD20Q7Z5Y7 419 aa13.58□□□□□ -0.24
ACTB-204ENST00000425660 YRDCQ86U90 279 aaKnown RBP13.58□□□□□ -0.24
ACTB-204ENST00000425660 PGLYRP3Q96LB9 341 aa13.58□□□□□ -0.24
ACTB-204ENST00000425660 CDADC1Q9BWV3 514 aa13.58□□□□□ -0.24
ACTB-204ENST00000425660 ST6GALNAC2Q9UJ37 374 aa13.58□□□□□ -0.24
ACTB-204ENST00000425660 A0A0J9YW62 118 aa13.57□□□□□ -0.24
ACTB-204ENST00000425660 TVP23AA6NH52 213 aa13.57□□□□□ -0.24
ACTB-204ENST00000425660 METTL15A6NJ78 407 aa13.57□□□□□ -0.24
ACTB-204ENST00000425660 LINC01387J3KSC0 135 aa13.57□□□□□ -0.24
ACTB-204ENST00000425660 OGG1O15527 345 aa13.57□□□□□ -0.24
ACTB-204ENST00000425660 HPNP05981 417 aa13.57□□□□□ -0.24
ACTB-204ENST00000425660 WT1P19544 449 aaPredicted RBP13.57□□□□□ -0.24
ACTB-204ENST00000425660 AGFG1P52594 562 aaKnown RBP13.57□□□□□ -0.24
ACTB-204ENST00000425660 BIDP55957 195 aa13.57□□□□□ -0.24
ACTB-204ENST00000425660 SRSF6Q13247 344 aaKnown RBP13.57□□□□□ -0.24
ACTB-204ENST00000425660 MFAP5Q13361 173 aa13.57□□□□□ -0.24
ACTB-204ENST00000425660 DYNC1I2Q13409 638 aaKnown RBP13.57□□□□□ -0.24
ACTB-204ENST00000425660 TBC1D25Q3MII6 688 aa13.57□□□□□ -0.24
ACTB-204ENST00000425660 ZNF404Q494X3 552 aa13.57□□□□□ -0.24
ACTB-204ENST00000425660 TP53I3Q53FA7 332 aa13.57□□□□□ -0.24
ACTB-204ENST00000425660 C22orf42Q6IC83 251 aa13.57□□□□□ -0.24
ACTB-204ENST00000425660 DNM1P34Q6PK57 102 aa13.57□□□□□ -0.24
ACTB-204ENST00000425660 GGNQ86UU5 652 aa13.57□□□□□ -0.24
ACTB-204ENST00000425660 SULF2Q8IWU5 870 aa13.57□□□□□ -0.24
ACTB-204ENST00000425660 OR6X1Q8NH79 312 aa13.57□□□□□ -0.24
ACTB-204ENST00000425660 OTOSQ8NHW6 89 aa13.57□□□□□ -0.24
ACTB-204ENST00000425660 RPS4Y2Q8TD47 263 aa13.57□□□□□ -0.24
ACTB-204ENST00000425660 HAVCR2Q8TDQ0 301 aa13.57□□□□□ -0.24
ACTB-204ENST00000425660 HAS2Q92819 552 aa13.57□□□□□ -0.24
ACTB-204ENST00000425660 SLC25A44Q96H78 314 aaPredicted RBP13.57□□□□□ -0.24
ACTB-204ENST00000425660 KCTD7Q96MP8 289 aa13.57□□□□□ -0.24
ACTB-204ENST00000425660 MED18Q9BUE0 208 aa13.57□□□□□ -0.24
ACTB-204ENST00000425660 MMP27Q9H306 513 aa13.57□□□□□ -0.24
ACTB-204ENST00000425660 MRPL22Q9NWU5 206 aaKnown RBP13.57□□□□□ -0.24
ACTB-204ENST00000425660 PLA2G3Q9NZ20 509 aa13.57□□□□□ -0.24
ACTB-204ENST00000425660 POLHQ9Y253 713 aa13.57□□□□□ -0.24
ACTB-204ENST00000425660 MED13Q9UHV7 2174 aa13.57□□□□□ -0.24
ACTB-204ENST00000425660 PRR32B1ATL7 298 aa13.57□□□□□ -0.24
ACTB-204ENST00000425660 PHYHO14832 338 aa13.57□□□□□ -0.24
ACTB-204ENST00000425660 NME2P1O60361 137 aa13.57□□□□□ -0.24
ACTB-204ENST00000425660 RAMP1O60894 148 aa13.57□□□□□ -0.24
ACTB-204ENST00000425660 SC5DO75845 299 aa13.57□□□□□ -0.24
ACTB-204ENST00000425660 SULT1C4O75897 302 aa13.57□□□□□ -0.24
ACTB-204ENST00000425660 IL1AP01583 271 aa13.57□□□□□ -0.24
ACTB-204ENST00000425660 SP1P08047 785 aa13.57□□□□□ -0.24
ACTB-204ENST00000425660 PGA4P0DJD7 388 aa13.57□□□□□ -0.24
ACTB-204ENST00000425660 PGA3P0DJD8 388 aa13.57□□□□□ -0.24
ACTB-204ENST00000425660 ZNF43P17038 809 aa13.57□□□□□ -0.24
ACTB-204ENST00000425660 NME2P22392 152 aa13.57□□□□□ -0.24
ACTB-204ENST00000425660 GDF1P27539 372 aa13.57□□□□□ -0.24
ACTB-204ENST00000425660 RPS19P39019 145 aaKnown RBP13.57□□□□□ -0.24
ACTB-204ENST00000425660 GBX2P52951 348 aaPredicted RBP13.57□□□□□ -0.24
ACTB-204ENST00000425660 RAC3P60763 192 aa13.57□□□□□ -0.24
ACTB-204ENST00000425660 SIRPAP78324 504 aa13.57□□□□□ -0.24
ACTB-204ENST00000425660 EGR3Q06889 387 aa13.57□□□□□ -0.24
ACTB-204ENST00000425660 CLN3Q13286 438 aa13.57□□□□□ -0.24
ACTB-204ENST00000425660 TRAM1Q15629 374 aa13.57□□□□□ -0.24
ACTB-204ENST00000425660 ETFDHQ16134 617 aa13.57□□□□□ -0.24
ACTB-204ENST00000425660 HYAL4Q2M3T9 481 aa13.57□□□□□ -0.24
ACTB-204ENST00000425660 ESPNLQ6ZVH7 1005 aa13.57□□□□□ -0.24
ACTB-204ENST00000425660 DPY19L4Q7Z388 723 aa13.57□□□□□ -0.24
ACTB-204ENST00000425660 GPAT4Q86UL3 456 aa13.57□□□□□ -0.24
ACTB-204ENST00000425660 SYT14Q8NB59 555 aa13.57□□□□□ -0.24
ACTB-204ENST00000425660 OR6N2Q8NGY6 317 aa13.57□□□□□ -0.24
ACTB-204ENST00000425660 SLC39A7Q92504 469 aa13.57□□□□□ -0.24
ACTB-204ENST00000425660 SMIM19Q96E16 107 aa13.57□□□□□ -0.24
ACTB-204ENST00000425660 ADGRG7Q96K78 797 aa13.57□□□□□ -0.24
ACTB-204ENST00000425660 DCLRE1CQ96SD1 692 aaKnown RBP13.57□□□□□ -0.24
ACTB-204ENST00000425660 TMED9Q9BVK6 235 aa13.57□□□□□ -0.24
ACTB-204ENST00000425660 HES7Q9BYE0 225 aa13.57□□□□□ -0.24
ACTB-204ENST00000425660 RERGLQ9H628 205 aa13.57□□□□□ -0.24
ACTB-204ENST00000425660 ZNF552Q9H707 407 aaPredicted RBP13.57□□□□□ -0.24
ACTB-204ENST00000425660 ACOXLQ9NUZ1 547 aa13.57□□□□□ -0.24
ACTB-204ENST00000425660 B4GALT7Q9UBV7 327 aa13.57□□□□□ -0.24
ACTB-204ENST00000425660 CDV3Q9UKY7 258 aaKnown RBP13.57□□□□□ -0.24
ACTB-204ENST00000425660 GSTK1Q9Y2Q3 226 aa13.57□□□□□ -0.24
ACTB-204ENST00000425660 KLHDC2Q9Y2U9 406 aa13.57□□□□□ -0.24
ACTB-204ENST00000425660 KLF13Q9Y2Y9 288 aaPredicted RBP13.57□□□□□ -0.24
ACTB-204ENST00000425660 CNTRLQ7Z7A1 2325 aa13.56□□□□□ -0.24
ACTB-204ENST00000425660 GABRPO00591 440 aa13.56□□□□□ -0.24
ACTB-204ENST00000425660 MAGEB4O15481 346 aaPredicted RBP13.56□□□□□ -0.24
ACTB-204ENST00000425660 ABHD16AO95870 558 aa13.56□□□□□ -0.24
ACTB-204ENST00000425660 KLK2P20151 261 aa13.56□□□□□ -0.24
ACTB-204ENST00000425660 TGM4P49221 684 aa13.56□□□□□ -0.24
ACTB-204ENST00000425660 BMXP51813 675 aa13.56□□□□□ -0.24
ACTB-204ENST00000425660 CLDN20P56880 219 aa13.56□□□□□ -0.24
ACTB-204ENST00000425660 CDK5R1Q15078 307 aa13.56□□□□□ -0.24
ACTB-204ENST00000425660 HIST3H3Q16695 136 aa13.56□□□□□ -0.24
ACTB-204ENST00000425660 PCK2Q16822 640 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms