RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 GPX5O75715 221 aa13.97□□□□□ -0.17
SHOX2-202ENST00000425436 ACTL6AO96019 429 aa13.97□□□□□ -0.17
SHOX2-202ENST00000425436 SBK2P0C263 348 aa13.97□□□□□ -0.17
SHOX2-202ENST00000425436 HIST1H1CP16403 213 aaKnown RBP13.97□□□□□ -0.17
SHOX2-202ENST00000425436 APOBEC1P41238 236 aaKnown RBP13.97□□□□□ -0.17
SHOX2-202ENST00000425436 EIF1P41567 113 aaKnown RBP13.97□□□□□ -0.17
SHOX2-202ENST00000425436 LHX2P50458 406 aa13.97□□□□□ -0.17
SHOX2-202ENST00000425436 SLC25A1P53007 311 aa13.97□□□□□ -0.17
SHOX2-202ENST00000425436 SLC16A1P53985 500 aa13.97□□□□□ -0.17
SHOX2-202ENST00000425436 EGR4Q05215 589 aa13.97□□□□□ -0.17
SHOX2-202ENST00000425436 GGTLC2Q14390 218 aa13.97□□□□□ -0.17
SHOX2-202ENST00000425436 MFSD13AQ14CX5 517 aa13.97□□□□□ -0.17
SHOX2-202ENST00000425436 ALG10Q5BKT4 473 aa13.97□□□□□ -0.17
SHOX2-202ENST00000425436 ZNF585AQ6P3V2 769 aa13.97□□□□□ -0.17
SHOX2-202ENST00000425436 MAMDC2Q7Z304 686 aaPredicted RBP13.97□□□□□ -0.17
SHOX2-202ENST00000425436 CD163Q86VB7 1156 aa13.97□□□□□ -0.17
SHOX2-202ENST00000425436 DOLPP1Q86YN1 238 aa13.97□□□□□ -0.17
SHOX2-202ENST00000425436 UBQLNLQ8IYU4 475 aa13.97□□□□□ -0.17
SHOX2-202ENST00000425436 FAM57AQ8TBR7 257 aa13.97□□□□□ -0.17
SHOX2-202ENST00000425436 KISS1RQ969F8 398 aaPredicted RBP13.97□□□□□ -0.17
SHOX2-202ENST00000425436 WDYHV1Q96HA8 205 aa13.97□□□□□ -0.17
SHOX2-202ENST00000425436 ZNF649Q9BS31 505 aa13.97□□□□□ -0.17
SHOX2-202ENST00000425436 EXOSC4Q9NPD3 245 aaKnown RBP13.97□□□□□ -0.17
SHOX2-202ENST00000425436 ASB6Q9NWX5 421 aa13.97□□□□□ -0.17
SHOX2-202ENST00000425436 BABAM2Q9NXR7 383 aa13.97□□□□□ -0.17
SHOX2-202ENST00000425436 CRNNQ9UBG3 495 aaPredicted RBP13.97□□□□□ -0.17
SHOX2-202ENST00000425436 MOKQ9UQ07 419 aa13.97□□□□□ -0.17
SHOX2-202ENST00000425436 CAMK2AQ9UQM7 478 aa13.97□□□□□ -0.17
SHOX2-202ENST00000425436 PEX16Q9Y5Y5 336 aa13.97□□□□□ -0.17
SHOX2-202ENST00000425436 TMED7-TICAM2A0A0A6YYA0 188 aa13.96□□□□□ -0.17
SHOX2-202ENST00000425436 TRGV8A0A0C4DH27 118 aa13.96□□□□□ -0.17
SHOX2-202ENST00000425436 METTL15A6NJ78 407 aa13.96□□□□□ -0.17
SHOX2-202ENST00000425436 C12orf71A8MTZ7 269 aa13.96□□□□□ -0.17
SHOX2-202ENST00000425436 APOL3O95236 402 aa13.96□□□□□ -0.17
SHOX2-202ENST00000425436 MT-ND5P03915 603 aa13.96□□□□□ -0.17
SHOX2-202ENST00000425436 HLA-DPB1P04440 258 aa13.96□□□□□ -0.17
SHOX2-202ENST00000425436 OR2T7P0C7T2 308 aa13.96□□□□□ -0.17
SHOX2-202ENST00000425436 ZNF17P17021 662 aa13.96□□□□□ -0.17
SHOX2-202ENST00000425436 POU3F2P20265 443 aaPredicted RBP13.96□□□□□ -0.17
SHOX2-202ENST00000425436 FGF9P31371 208 aaPredicted RBP13.96□□□□□ -0.17
SHOX2-202ENST00000425436 UQCRC1P31930 480 aa13.96□□□□□ -0.17
SHOX2-202ENST00000425436 S100A5P33763 92 aa13.96□□□□□ -0.17
SHOX2-202ENST00000425436 SUCLG1P53597 346 aaKnown RBP13.96□□□□□ -0.17
SHOX2-202ENST00000425436 CLDN20P56880 219 aa13.96□□□□□ -0.17
SHOX2-202ENST00000425436 TRAM1Q15629 374 aa13.96□□□□□ -0.17
SHOX2-202ENST00000425436 SLC25A53Q5H9E4 307 aa13.96□□□□□ -0.17
SHOX2-202ENST00000425436 OR2G6Q5TZ20 316 aa13.96□□□□□ -0.17
SHOX2-202ENST00000425436 C1QL3Q5VWW1 255 aa13.96□□□□□ -0.17
SHOX2-202ENST00000425436 C16orf87Q6PH81 154 aa13.96□□□□□ -0.17
SHOX2-202ENST00000425436 SHFQ7M4L6 423 aa13.96□□□□□ -0.17
SHOX2-202ENST00000425436 NANOGNBQ7Z5D8 188 aa13.96□□□□□ -0.17
SHOX2-202ENST00000425436 JAZF1Q86VZ6 243 aa13.96□□□□□ -0.17
SHOX2-202ENST00000425436 OR2T27Q8NH04 317 aa13.96□□□□□ -0.17
SHOX2-202ENST00000425436 OR4K13Q8NH42 304 aa13.96□□□□□ -0.17
SHOX2-202ENST00000425436 MRGPRX4Q96LA9 322 aa13.96□□□□□ -0.17
SHOX2-202ENST00000425436 MED18Q9BUE0 208 aa13.96□□□□□ -0.17
SHOX2-202ENST00000425436 MED20Q9H944 212 aa13.96□□□□□ -0.17
SHOX2-202ENST00000425436 TMED7Q9Y3B3 224 aa13.96□□□□□ -0.17
SHOX2-202ENST00000425436 POLEQ07864 2286 aa13.96□□□□□ -0.17
SHOX2-202ENST00000425436 A0A075B6Q4 140 aa13.95□□□□□ -0.18
SHOX2-202ENST00000425436 TRDV1A0A1B0GX56 115 aa13.95□□□□□ -0.18
SHOX2-202ENST00000425436 PRRG2O14669 202 aa13.95□□□□□ -0.18
SHOX2-202ENST00000425436 SEC14L5O43304 696 aa13.95□□□□□ -0.18
SHOX2-202ENST00000425436 IL1AP01583 271 aa13.95□□□□□ -0.18
SHOX2-202ENST00000425436 CALRP27797 417 aaKnown RBP13.95□□□□□ -0.18
SHOX2-202ENST00000425436 ADH6P28332 368 aa13.95□□□□□ -0.18
SHOX2-202ENST00000425436 SHC1P29353 583 aa13.95□□□□□ -0.18
SHOX2-202ENST00000425436 SDHAP31040 664 aa13.95□□□□□ -0.18
SHOX2-202ENST00000425436 OPRL1P41146 370 aa13.95□□□□□ -0.18
SHOX2-202ENST00000425436 AQP2P41181 271 aa13.95□□□□□ -0.18
SHOX2-202ENST00000425436 DIO1P49895 249 aa13.95□□□□□ -0.18
SHOX2-202ENST00000425436 RORCP51449 518 aa13.95□□□□□ -0.18
SHOX2-202ENST00000425436 CLDN15P56746 228 aa13.95□□□□□ -0.18
SHOX2-202ENST00000425436 CLDN18P56856 261 aa13.95□□□□□ -0.18
SHOX2-202ENST00000425436 CTXN1P60606 82 aa13.95□□□□□ -0.18
SHOX2-202ENST00000425436 HSF2Q03933 536 aa13.95□□□□□ -0.18
SHOX2-202ENST00000425436 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.95□□□□□ -0.18
SHOX2-202ENST00000425436 FAM69AQ5T7M9 428 aa13.95□□□□□ -0.18
SHOX2-202ENST00000425436 LRRC75AQ8NAA5 344 aa13.95□□□□□ -0.18
SHOX2-202ENST00000425436 NPEPL1Q8NDH3 523 aa13.95□□□□□ -0.18
SHOX2-202ENST00000425436 OR10H4Q8NGA5 316 aa13.95□□□□□ -0.18
SHOX2-202ENST00000425436 SPRYD4Q8WW59 207 aaPredicted RBP13.95□□□□□ -0.18
SHOX2-202ENST00000425436 TAAR8Q969N4 342 aa13.95□□□□□ -0.18
SHOX2-202ENST00000425436 KTI12Q96EK9 354 aaPredicted RBP13.95□□□□□ -0.18
SHOX2-202ENST00000425436 KCTD7Q96MP8 289 aa13.95□□□□□ -0.18
SHOX2-202ENST00000425436 DDOQ99489 341 aa13.95□□□□□ -0.18
SHOX2-202ENST00000425436 KATNB1Q9BVA0 655 aa13.95□□□□□ -0.18
SHOX2-202ENST00000425436 ALG8Q9BVK2 526 aa13.95□□□□□ -0.18
SHOX2-202ENST00000425436 HCAR1Q9BXC0 346 aa13.95□□□□□ -0.18
SHOX2-202ENST00000425436 ADGRL4Q9HBW9 690 aa13.95□□□□□ -0.18
SHOX2-202ENST00000425436 TRIM36Q9NQ86 728 aa13.95□□□□□ -0.18
SHOX2-202ENST00000425436 GRHPRQ9UBQ7 328 aa13.95□□□□□ -0.18
SHOX2-202ENST00000425436 ETV2O00321 342 aaPredicted RBP13.95□□□□□ -0.18
SHOX2-202ENST00000425436 NPIPB7O75200 414 aa13.95□□□□□ -0.18
SHOX2-202ENST00000425436 BGLAPP02818 100 aa13.95□□□□□ -0.18
SHOX2-202ENST00000425436 ZNF708P17019 499 aa13.95□□□□□ -0.18
SHOX2-202ENST00000425436 FKBP2P26885 142 aaKnown RBP13.95□□□□□ -0.18
SHOX2-202ENST00000425436 SFTPDP35247 375 aa13.95□□□□□ -0.18
SHOX2-202ENST00000425436 RPS3AP61247 264 aaKnown RBP13.95□□□□□ -0.18
SHOX2-202ENST00000425436 ACTA2P62736 377 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms