RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 OR8G3PP0DMU2 310 aa23.72■■□□□ 1.39
LDB1-202ENST00000425280 PPP5CP53041 499 aa23.72■■□□□ 1.39
LDB1-202ENST00000425280 OC90Q02509 493 aaPredicted RBP23.72■■□□□ 1.39
LDB1-202ENST00000425280 OTPQ5XKR4 325 aa23.72■■□□□ 1.39
LDB1-202ENST00000425280 TMPPEQ6ZT21 453 aa23.72■■□□□ 1.39
LDB1-202ENST00000425280 MED12Q93074 2177 aa23.72■■□□□ 1.39
LDB1-202ENST00000425280 TRBV2A0A0J9YWF9 115 aa23.72■■□□□ 1.39
LDB1-202ENST00000425280 F10P00742 488 aa23.72■■□□□ 1.39
LDB1-202ENST00000425280 CD1AP06126 327 aa23.72■■□□□ 1.39
LDB1-202ENST00000425280 ZNF17P17021 662 aa23.72■■□□□ 1.39
LDB1-202ENST00000425280 BIDP55957 195 aa23.72■■□□□ 1.39
LDB1-202ENST00000425280 ZNF239Q16600 458 aaKnown RBP23.72■■□□□ 1.39
LDB1-202ENST00000425280 CEACAM19Q7Z692 300 aa23.72■■□□□ 1.39
LDB1-202ENST00000425280 CCDC190Q86UF4 302 aa23.72■■□□□ 1.39
LDB1-202ENST00000425280 UEVLDQ8IX04 471 aa23.72■■□□□ 1.39
LDB1-202ENST00000425280 OR13C5Q8NGS8 318 aa23.72■■□□□ 1.39
LDB1-202ENST00000425280 DEPPQ9NTK1 212 aa23.72■■□□□ 1.39
LDB1-202ENST00000425280 ING1Q9UK53 422 aaPredicted RBP23.72■■□□□ 1.39
LDB1-202ENST00000425280 TMEM14AQ9Y6G1 99 aa23.72■■□□□ 1.39
LDB1-202ENST00000425280 ZNF593O00488 134 aaPredicted RBP23.71■■□□□ 1.39
LDB1-202ENST00000425280 ABHD16AO95870 558 aa23.71■■□□□ 1.39
LDB1-202ENST00000425280 ETV6P41212 452 aa23.71■■□□□ 1.39
LDB1-202ENST00000425280 NBL1P41271 181 aa23.71■■□□□ 1.39
LDB1-202ENST00000425280 SLC35A1P78382 337 aa23.71■■□□□ 1.39
LDB1-202ENST00000425280 FMODQ06828 376 aa23.71■■□□□ 1.39
LDB1-202ENST00000425280 TMPRSS12Q86WS5 348 aa23.71■■□□□ 1.39
LDB1-202ENST00000425280 OTOSQ8NHW6 89 aa23.71■■□□□ 1.39
LDB1-202ENST00000425280 RPS4Y2Q8TD47 263 aa23.71■■□□□ 1.39
LDB1-202ENST00000425280 IP6K3Q96PC2 410 aa23.71■■□□□ 1.39
LDB1-202ENST00000425280 EMC6Q9BV81 110 aa23.71■■□□□ 1.39
LDB1-202ENST00000425280 KCNG2Q9UJ96 466 aa23.71■■□□□ 1.39
LDB1-202ENST00000425280 COA3Q9Y2R0 106 aaPredicted RBP23.71■■□□□ 1.39
LDB1-202ENST00000425280 LRRC3CA6NJW4 275 aa23.71■■□□□ 1.39
LDB1-202ENST00000425280 IQCJ-SCHIP1C9J366 451 aaPredicted RBP23.71■■□□□ 1.39
LDB1-202ENST00000425280 PMS2P2O95744 297 aa23.71■■□□□ 1.39
LDB1-202ENST00000425280 TACSTD2P09758 323 aa23.71■■□□□ 1.39
LDB1-202ENST00000425280 CD40LGP29965 261 aa23.71■■□□□ 1.39
LDB1-202ENST00000425280 ZNF45Q02386 682 aa23.71■■□□□ 1.39
LDB1-202ENST00000425280 ACSM3Q53FZ2 586 aa23.71■■□□□ 1.39
LDB1-202ENST00000425280 FAM27D1Q5T7N8 215 aa23.71■■□□□ 1.39
LDB1-202ENST00000425280 FAM220AQ7Z4H9 259 aa23.71■■□□□ 1.39
LDB1-202ENST00000425280 SNX29P2Q8IUI4 249 aa23.71■■□□□ 1.39
LDB1-202ENST00000425280 EGFL6Q8IUX8 553 aa23.71■■□□□ 1.39
LDB1-202ENST00000425280 PARP16Q8N5Y8 322 aa23.71■■□□□ 1.39
LDB1-202ENST00000425280 FNDC8Q8TC99 324 aa23.71■■□□□ 1.39
LDB1-202ENST00000425280 THEM6Q8WUY1 208 aa23.71■■□□□ 1.39
LDB1-202ENST00000425280 TEKT2Q9UIF3 430 aa23.71■■□□□ 1.39
LDB1-202ENST00000425280 AQP7P3A6NL99 342 aa23.7■■□□□ 1.38
LDB1-202ENST00000425280 RGS5O15539 181 aa23.7■■□□□ 1.38
LDB1-202ENST00000425280 UPK3AO75631 287 aa23.7■■□□□ 1.38
LDB1-202ENST00000425280 NCR1O76036 304 aa23.7■■□□□ 1.38
LDB1-202ENST00000425280 KLK2P20151 261 aa23.7■■□□□ 1.38
LDB1-202ENST00000425280 CALRP27797 417 aaKnown RBP23.7■■□□□ 1.38
LDB1-202ENST00000425280 SRD5A2P31213 254 aa23.7■■□□□ 1.38
LDB1-202ENST00000425280 TNFSF8P32971 234 aa23.7■■□□□ 1.38
LDB1-202ENST00000425280 MTNR1BP49286 362 aa23.7■■□□□ 1.38
LDB1-202ENST00000425280 GPR85P60893 370 aa23.7■■□□□ 1.38
LDB1-202ENST00000425280 IFITM3Q01628 133 aa23.7■■□□□ 1.38
LDB1-202ENST00000425280 ZSCAN2Q7Z7L9 614 aaPredicted RBP23.7■■□□□ 1.38
LDB1-202ENST00000425280 DTX1Q86Y01 620 aa23.7■■□□□ 1.38
LDB1-202ENST00000425280 YIPF7Q8N8F6 280 aa23.7■■□□□ 1.38
LDB1-202ENST00000425280 AMELYQ99218 206 aa23.7■■□□□ 1.38
LDB1-202ENST00000425280 PRRX2Q99811 253 aa23.7■■□□□ 1.38
LDB1-202ENST00000425280 PIGQQ9BRB3 760 aa23.7■■□□□ 1.38
LDB1-202ENST00000425280 CDRT15L2A8MXV6 281 aa23.69■■□□□ 1.38
LDB1-202ENST00000425280 PHYHO14832 338 aa23.69■■□□□ 1.38
LDB1-202ENST00000425280 RAMP1O60894 148 aa23.69■■□□□ 1.38
LDB1-202ENST00000425280 KRT8P05787 483 aa23.69■■□□□ 1.38
LDB1-202ENST00000425280 ITGA3P26006 1051 aa23.69■■□□□ 1.38
LDB1-202ENST00000425280 CD96P40200 585 aa23.69■■□□□ 1.38
LDB1-202ENST00000425280 NANOS3P60323 173 aaKnown RBP23.69■■□□□ 1.38
LDB1-202ENST00000425280 GLO1Q04760 184 aa23.69■■□□□ 1.38
LDB1-202ENST00000425280 EGR3Q06889 387 aa23.69■■□□□ 1.38
LDB1-202ENST00000425280 TOMM20Q15388 145 aa23.69■■□□□ 1.38
LDB1-202ENST00000425280 ABHD17BQ5VST6 288 aa23.69■■□□□ 1.38
LDB1-202ENST00000425280 LIPNQ5VXI9 398 aa23.69■■□□□ 1.38
LDB1-202ENST00000425280 GPAT4Q86UL3 456 aa23.69■■□□□ 1.38
LDB1-202ENST00000425280 OXGR1Q96P68 337 aa23.69■■□□□ 1.38
LDB1-202ENST00000425280 PDCD1LG2Q9BQ51 273 aa23.69■■□□□ 1.38
LDB1-202ENST00000425280 LRFN1Q9P244 771 aa23.69■■□□□ 1.38
LDB1-202ENST00000425280 KLHL13Q9P2N7 655 aa23.69■■□□□ 1.38
LDB1-202ENST00000425280 SEC14L5O43304 696 aa23.69■■□□□ 1.38
LDB1-202ENST00000425280 TRAF3IP2O43734 574 aaPredicted RBP23.69■■□□□ 1.38
LDB1-202ENST00000425280 SULT1C4O75897 302 aa23.69■■□□□ 1.38
LDB1-202ENST00000425280 CD82P27701 267 aa23.69■■□□□ 1.38
LDB1-202ENST00000425280 PTGS2P35354 604 aa23.69■■□□□ 1.38
LDB1-202ENST00000425280 B3GALT5-AS1P59052 145 aa23.69■■□□□ 1.38
LDB1-202ENST00000425280 RPS11P62280 158 aaKnown RBP eCLIP23.69■■□□□ 1.38
LDB1-202ENST00000425280 AIMP2Q13155 320 aaKnown RBP23.69■■□□□ 1.38
LDB1-202ENST00000425280 MEP1BQ16820 701 aa23.69■■□□□ 1.38
LDB1-202ENST00000425280 TMEM225Q6GV28 225 aa23.69■■□□□ 1.38
LDB1-202ENST00000425280 SPINK14Q6IE38 97 aa23.69■■□□□ 1.38
LDB1-202ENST00000425280 DNM1P34Q6PK57 102 aa23.69■■□□□ 1.38
LDB1-202ENST00000425280 LAX1Q8IWV1 398 aa23.69■■□□□ 1.38
LDB1-202ENST00000425280 CEP19Q96LK0 163 aa23.69■■□□□ 1.38
LDB1-202ENST00000425280 LRFN3Q9BTN0 628 aa23.69■■□□□ 1.38
LDB1-202ENST00000425280 RNF32Q9H0A6 362 aa23.69■■□□□ 1.38
LDB1-202ENST00000425280 IKZF2Q9UKS7 526 aa23.69■■□□□ 1.38
LDB1-202ENST00000425280 FREM2Q5SZK8 3169 aa23.68■■□□□ 1.38
LDB1-202ENST00000425280 IGKV1D-43A0A0B4J1Z2 117 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms