RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 POLR2J3Q9H1A7 115 aaKnown RBP11.24□□□□□ -0.61
VRK3-203ENST00000424804 PLK3Q9H4B4 646 aa11.24□□□□□ -0.61
VRK3-203ENST00000424804 CRLF2Q9HC73 371 aa11.24□□□□□ -0.61
VRK3-203ENST00000424804 CA10Q9NS85 328 aa11.24□□□□□ -0.61
VRK3-203ENST00000424804 C20orf141Q9NUB4 165 aa11.24□□□□□ -0.61
VRK3-203ENST00000424804 ZNF229Q9UJW7 825 aa11.24□□□□□ -0.61
VRK3-203ENST00000424804 A4GNTQ9UNA3 340 aa11.24□□□□□ -0.61
VRK3-203ENST00000424804 B2RBV5 119 aa11.23□□□□□ -0.61
VRK3-203ENST00000424804 MCIDASD6RGH6 385 aa11.23□□□□□ -0.61
VRK3-203ENST00000424804 hCG_2039718K7EN88 272 aa11.23□□□□□ -0.61
VRK3-203ENST00000424804 LMX1BO60663 402 aa11.23□□□□□ -0.61
VRK3-203ENST00000424804 OR7A10O76100 309 aa11.23□□□□□ -0.61
VRK3-203ENST00000424804 IGKV3-15P01624 115 aa11.23□□□□□ -0.61
VRK3-203ENST00000424804 CELA3BP08861 270 aa11.23□□□□□ -0.61
VRK3-203ENST00000424804 CSF3P09919 207 aa11.23□□□□□ -0.61
VRK3-203ENST00000424804 THBS2P35442 1172 aa11.23□□□□□ -0.61
VRK3-203ENST00000424804 SERPINF1P36955 418 aa11.23□□□□□ -0.61
VRK3-203ENST00000424804 ARF1P84077 181 aaKnown RBP11.23□□□□□ -0.61
VRK3-203ENST00000424804 SRSF2Q01130 221 aaKnown RBP11.23□□□□□ -0.61
VRK3-203ENST00000424804 TRAM2Q15035 370 aa11.23□□□□□ -0.61
VRK3-203ENST00000424804 EFNB3Q15768 340 aa11.23□□□□□ -0.61
VRK3-203ENST00000424804 SAMD4BQ5PRF9 694 aaKnown RBP11.23□□□□□ -0.61
VRK3-203ENST00000424804 PHYHD1Q5SRE7 291 aa11.23□□□□□ -0.61
VRK3-203ENST00000424804 SLC35D2Q76EJ3 337 aa11.23□□□□□ -0.61
VRK3-203ENST00000424804 SLC46A3Q7Z3Q1 461 aa11.23□□□□□ -0.61
VRK3-203ENST00000424804 PXKQ7Z7A4 578 aa11.23□□□□□ -0.61
VRK3-203ENST00000424804 FAM169BQ8N8A8 192 aa11.23□□□□□ -0.61
VRK3-203ENST00000424804 NSL1Q96IY1 281 aa11.23□□□□□ -0.61
VRK3-203ENST00000424804 ZNF75AQ96N20 296 aa11.23□□□□□ -0.61
VRK3-203ENST00000424804 DOK1Q99704 481 aa11.23□□□□□ -0.61
VRK3-203ENST00000424804 ZNF426Q9BUY5 554 aa11.23□□□□□ -0.61
VRK3-203ENST00000424804 GPR35Q9HC97 309 aa11.23□□□□□ -0.61
VRK3-203ENST00000424804 B3GAT2Q9NPZ5 323 aa11.23□□□□□ -0.61
VRK3-203ENST00000424804 NDE1Q9NXR1 346 aa11.23□□□□□ -0.61
VRK3-203ENST00000424804 TAS2R5Q9NYW4 299 aa11.23□□□□□ -0.61
VRK3-203ENST00000424804 SAMD4AQ9UPU9 718 aaKnown RBP11.23□□□□□ -0.61
VRK3-203ENST00000424804 FAM32AQ9Y421 112 aaKnown RBP11.23□□□□□ -0.61
VRK3-203ENST00000424804 DIRAS1O95057 198 aa11.22□□□□□ -0.61
VRK3-203ENST00000424804 F13BP05160 661 aa11.22□□□□□ -0.61
VRK3-203ENST00000424804 SAGP10523 405 aaPredicted RBP11.22□□□□□ -0.61
VRK3-203ENST00000424804 THRBP10828 461 aa11.22□□□□□ -0.61
VRK3-203ENST00000424804 HOXB1P14653 301 aaPredicted RBP11.22□□□□□ -0.61
VRK3-203ENST00000424804 FUT4P22083 530 aa11.22□□□□□ -0.61
VRK3-203ENST00000424804 CSNK1A1P48729 337 aa11.22□□□□□ -0.61
VRK3-203ENST00000424804 PDLIM4P50479 330 aa11.22□□□□□ -0.61
VRK3-203ENST00000424804 MNAT1P51948 309 aa11.22□□□□□ -0.61
VRK3-203ENST00000424804 KRT72Q14CN4 511 aa11.22□□□□□ -0.61
VRK3-203ENST00000424804 MSMPQ1L6U9 139 aa11.22□□□□□ -0.61
VRK3-203ENST00000424804 FGD3Q5JSP0 725 aa11.22□□□□□ -0.61
VRK3-203ENST00000424804 ZNF730Q6ZMV8 503 aa11.22□□□□□ -0.61
VRK3-203ENST00000424804 IL17RELQ6ZVW7 336 aa11.22□□□□□ -0.61
VRK3-203ENST00000424804 RRM2BQ7LG56 351 aa11.22□□□□□ -0.61
VRK3-203ENST00000424804 OFCC1Q8IZS5 231 aa11.22□□□□□ -0.61
VRK3-203ENST00000424804 TMEM123Q8N131 208 aa11.22□□□□□ -0.61
VRK3-203ENST00000424804 FAM86B1Q8N7N1 296 aa11.22□□□□□ -0.61
VRK3-203ENST00000424804 ANKK1Q8NFD2 765 aa11.22□□□□□ -0.61
VRK3-203ENST00000424804 NSMCE2Q96MF7 247 aa11.22□□□□□ -0.61
VRK3-203ENST00000424804 BEX2Q9BXY8 128 aa11.22□□□□□ -0.61
VRK3-203ENST00000424804 ULBP2Q9BZM5 246 aa11.22□□□□□ -0.61
VRK3-203ENST00000424804 MAGEL2Q9UJ55 1249 aa11.22□□□□□ -0.61
VRK3-203ENST00000424804 POFUT2Q9Y2G5 429 aa11.22□□□□□ -0.61
VRK3-203ENST00000424804 LOC102725191A0A1B0GVB3 256 aa11.21□□□□□ -0.61
VRK3-203ENST00000424804 A0A1W2PRG6 482 aa11.21□□□□□ -0.61
VRK3-203ENST00000424804 B9A039 149 aa11.21□□□□□ -0.61
VRK3-203ENST00000424804 NDUFS8O00217 210 aa11.21□□□□□ -0.61
VRK3-203ENST00000424804 ARPC2O15144 300 aa11.21□□□□□ -0.61
VRK3-203ENST00000424804 PDE5AO76074 875 aa11.21□□□□□ -0.61
VRK3-203ENST00000424804 BCL10O95999 233 aa11.21□□□□□ -0.61
VRK3-203ENST00000424804 OR4A8P0C604 315 aa11.21□□□□□ -0.61
VRK3-203ENST00000424804 ASAH2BP0C7U1 165 aa11.21□□□□□ -0.61
VRK3-203ENST00000424804 BMP4P12644 408 aa11.21□□□□□ -0.61
VRK3-203ENST00000424804 CBR1P16152 277 aa11.21□□□□□ -0.61
VRK3-203ENST00000424804 THBS4P35443 961 aa11.21□□□□□ -0.61
VRK3-203ENST00000424804 AQP2P41181 271 aa11.21□□□□□ -0.61
VRK3-203ENST00000424804 GZMKP49863 264 aa11.21□□□□□ -0.61
VRK3-203ENST00000424804 SH3BGRP55822 239 aaPredicted RBP11.21□□□□□ -0.61
VRK3-203ENST00000424804 CLRN1P58418 232 aa11.21□□□□□ -0.61
VRK3-203ENST00000424804 RPL18Q07020 188 aaKnown RBP11.21□□□□□ -0.61
VRK3-203ENST00000424804 TOP3AQ13472 1001 aaPredicted RBP11.21□□□□□ -0.61
VRK3-203ENST00000424804 GGTLC2Q14390 218 aa11.21□□□□□ -0.61
VRK3-203ENST00000424804 NRMQ8IXM6 262 aa11.21□□□□□ -0.61
VRK3-203ENST00000424804 C20orf196Q8IYI0 205 aa11.21□□□□□ -0.61
VRK3-203ENST00000424804 ZCCHC24Q8N2G6 241 aaKnown RBP11.21□□□□□ -0.61
VRK3-203ENST00000424804 NUP37Q8NFH4 326 aa11.21□□□□□ -0.61
VRK3-203ENST00000424804 MOSPD2Q8NHP6 518 aa11.21□□□□□ -0.61
VRK3-203ENST00000424804 BCAS4Q8TDM0 211 aa11.21□□□□□ -0.61
VRK3-203ENST00000424804 BPIFA2Q96DR5 249 aa11.21□□□□□ -0.61
VRK3-203ENST00000424804 KCNS3Q9BQ31 491 aa11.21□□□□□ -0.61
VRK3-203ENST00000424804 DCAF13Q9NV06 445 aaKnown RBP11.21□□□□□ -0.61
VRK3-203ENST00000424804 B3GNT2Q9NY97 397 aa11.21□□□□□ -0.61
VRK3-203ENST00000424804 ENPP4Q9Y6X5 453 aa11.21□□□□□ -0.61
VRK3-203ENST00000424804 IGHV2OR16-5A0A0B4J2B6 119 aa11.2□□□□□ -0.62
VRK3-203ENST00000424804 LOC390937A0A1W2PQ73 354 aa11.2□□□□□ -0.62
VRK3-203ENST00000424804 FFAR1O14842 300 aa11.2□□□□□ -0.62
VRK3-203ENST00000424804 STAMBPO95630 424 aa11.2□□□□□ -0.62
VRK3-203ENST00000424804 HSD17B1P14061 328 aa11.2□□□□□ -0.62
VRK3-203ENST00000424804 ZNF23P17027 643 aa11.2□□□□□ -0.62
VRK3-203ENST00000424804 PAX7P23759 505 aa11.2□□□□□ -0.62
VRK3-203ENST00000424804 GIFP27352 417 aa11.2□□□□□ -0.62
VRK3-203ENST00000424804 IL2RGP31785 369 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms