RNA–Protein interactions for RNA: ENST00000423368.6

CNOT4-205, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT4, Length 3,297 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-205ENST00000423368 FZD8Q9H461 694 aa6.27□□□□□ -1.41
CNOT4-205ENST00000423368 RPF1Q9H9Y2 349 aaKnown RBP6.27□□□□□ -1.41
CNOT4-205ENST00000423368 CHST11Q9NPF2 352 aa6.27□□□□□ -1.41
CNOT4-205ENST00000423368 KCNJ16Q9NPI9 418 aa6.27□□□□□ -1.41
CNOT4-205ENST00000423368 SPHK2Q9NRA0 654 aa6.27□□□□□ -1.41
CNOT4-205ENST00000423368 UBR1Q8IWV7 1749 aa6.27□□□□□ -1.41
CNOT4-205ENST00000423368 SNRNP200O75643 2136 aaKnown RBP6.27□□□□□ -1.41
CNOT4-205ENST00000423368 TOPAZ1Q8N9V7 1692 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 TJP1Q07157 1748 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 SLC5A10A0PJK1 596 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 DDTLA6NHG4 134 aaPredicted RBP6.26□□□□□ -1.41
CNOT4-205ENST00000423368 METTL12A8MUP2 240 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 MKRN2OSH3BPM6 223 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 SAP18O00422 153 aaKnown RBP6.26□□□□□ -1.41
CNOT4-205ENST00000423368 MAN2B1O00754 1011 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 FRS3O43559 492 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 ADAP1O75689 374 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 AHSA1O95433 338 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 PDYNP01213 254 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 HLA-AP01891 365 aaKnown RBP6.26□□□□□ -1.41
CNOT4-205ENST00000423368 ATP1B1P05026 303 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 GYPBP06028 91 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 C8GP07360 202 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 MMP9P14780 707 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 SDC1P18827 310 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 MC3RP41968 323 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 GIPRP48546 466 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 WDR5P61964 334 aaKnown RBP6.26□□□□□ -1.41
CNOT4-205ENST00000423368 SNRPNP63162 240 aaKnown RBP6.26□□□□□ -1.41
CNOT4-205ENST00000423368 HTRA3P83110 453 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 SCARB2Q14108 478 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 CCSMST1Q4G0I0 132 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 EOGTQ5NDL2 527 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 STPG1Q5TH74 334 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 C1orf189Q5VU69 101 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 C11orf87Q6NUJ2 197 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 ACOT7LQ6ZUV0 252 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 NECAP1Q8NC96 275 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 FAM71CQ8NEG0 241 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 ZNF596Q8TC21 504 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 STT3BQ8TCJ2 826 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 ABHD5Q8WTS1 349 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 TSLPQ969D9 159 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 PRRX2Q99811 253 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 SLC12A9Q9BXP2 914 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 KCNK15Q9H427 330 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 UBQLN4Q9NRR5 601 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 EXOSC1Q9Y3B2 195 aaKnown RBP6.26□□□□□ -1.41
CNOT4-205ENST00000423368 CSAG2Q9Y5P2 127 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 RIMBP3Q9UFD9 1639 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 TBC1D3DA0A087WVF3 549 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 TBC1D3IA0A087WXS9 549 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 TBC1D3EA0A087X179 549 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 TBC1D3KA0A087X1G2 549 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 TRBV5-3A0A0A0MS03 114 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 TBC1D3BA6NDS4 549 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 MSGN1A6NI15 193 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 TBC1D3LB9A6J9 549 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 FAAHO00519 579 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 FFAR1O14842 300 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 BCAT2O15382 392 aaPredicted RBP6.26□□□□□ -1.41
CNOT4-205ENST00000423368 AMBPP02760 352 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 SEMG1P04279 462 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 TBC1D3HP0C7X1 549 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 TYRP14679 529 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 LAG3P18627 525 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 BRS3P32247 399 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 MTNR1BP49286 362 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 HMGCS2P54868 508 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 ELLP55199 621 aaPredicted RBP6.26□□□□□ -1.41
CNOT4-205ENST00000423368 EFNB1P98172 346 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 CHIT1Q13231 466 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 ATP6V1FQ16864 119 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 CST9LP1Q5W188 147 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 TBC1D3GQ6DHY5 549 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 TBC1D3CQ6IPX1 549 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 WDR73Q6P4I2 378 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 TRIM46Q7Z4K8 759 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 P4HA3Q7Z4N8 544 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 DCXRQ7Z4W1 244 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 CD163Q86VB7 1156 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 SCN4BQ8IWT1 228 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 TBC1D3Q8IZP1 549 aaPredicted RBP6.26□□□□□ -1.41
CNOT4-205ENST00000423368 OR4S1Q8NGB4 309 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 OR5M8Q8NGP6 311 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 ARRDC2Q8TBH0 407 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 SLC7A13Q8TCU3 470 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 NUDCD2Q8WVJ2 157 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 OR6C1Q96RD1 312 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 GPA33Q99795 319 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 GPR87Q9BY21 358 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 SLC25A31Q9H0C2 315 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 OR51I1Q9H343 314 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 MYOTQ9UBF9 498 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 FBXW2Q9UKT8 454 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 CDV3Q9UKY7 258 aaKnown RBP6.26□□□□□ -1.41
CNOT4-205ENST00000423368 SLC7A7Q9UM01 511 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 PRG3Q9Y2Y8 225 aaPredicted RBP6.26□□□□□ -1.41
CNOT4-205ENST00000423368 SLC22A31A6NKX4 558 aa6.26□□□□□ -1.41
CNOT4-205ENST00000423368 C4orf47A7E2U8 309 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms