RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 GIFP27352 417 aa9.88□□□□□ -0.83
DDX56-203ENST00000421223 CCKBRP32239 447 aa9.88□□□□□ -0.83
DDX56-203ENST00000421223 ALKBH1Q13686 389 aaKnown RBP9.88□□□□□ -0.83
DDX56-203ENST00000421223 GGTLC2Q14390 218 aa9.88□□□□□ -0.83
DDX56-203ENST00000421223 PRAMEF20Q5VT98 475 aa9.88□□□□□ -0.83
DDX56-203ENST00000421223 KRT77Q7Z794 578 aa9.88□□□□□ -0.83
DDX56-203ENST00000421223 SIAH3Q8IW03 269 aa9.88□□□□□ -0.83
DDX56-203ENST00000421223 SLC43A2Q8N370 569 aa9.88□□□□□ -0.83
DDX56-203ENST00000421223 ESX1Q8N693 406 aa9.88□□□□□ -0.83
DDX56-203ENST00000421223 TMEM106AQ96A25 262 aa9.88□□□□□ -0.83
DDX56-203ENST00000421223 NXPE2Q96DL1 559 aa9.88□□□□□ -0.83
DDX56-203ENST00000421223 CHRNA10Q9GZZ6 450 aa9.88□□□□□ -0.83
DDX56-203ENST00000421223 SLITRK2Q9H156 845 aa9.88□□□□□ -0.83
DDX56-203ENST00000421223 METTL7AQ9H8H3 244 aa9.88□□□□□ -0.83
DDX56-203ENST00000421223 LIN7BQ9HAP6 207 aa9.88□□□□□ -0.83
DDX56-203ENST00000421223 MCUBQ9NWR8 336 aa9.88□□□□□ -0.83
DDX56-203ENST00000421223 COA3Q9Y2R0 106 aaPredicted RBP9.88□□□□□ -0.83
DDX56-203ENST00000421223 CEP192Q8TEP8 1941 aa9.88□□□□□ -0.83
DDX56-203ENST00000421223 FREM2Q5SZK8 3169 aa9.88□□□□□ -0.83
DDX56-203ENST00000421223 ANXA2P2A6NMY6 339 aa9.88□□□□□ -0.83
DDX56-203ENST00000421223 G3V3Y1 287 aa9.88□□□□□ -0.83
DDX56-203ENST00000421223 ORC5O43913 435 aa9.88□□□□□ -0.83
DDX56-203ENST00000421223 FADS1O60427 444 aa9.88□□□□□ -0.83
DDX56-203ENST00000421223 EIF4E2O60573 245 aaKnown RBP9.88□□□□□ -0.83
DDX56-203ENST00000421223 ITGA10O75578 1167 aa9.88□□□□□ -0.83
DDX56-203ENST00000421223 ANXA2P07355 339 aaKnown RBP9.88□□□□□ -0.83
DDX56-203ENST00000421223 CD53P19397 219 aa9.88□□□□□ -0.83
DDX56-203ENST00000421223 POU3F1Q03052 451 aaPredicted RBP9.88□□□□□ -0.83
DDX56-203ENST00000421223 CORO6Q6QEF8 472 aa9.88□□□□□ -0.83
DDX56-203ENST00000421223 PRSS42Q7Z5A4 293 aa9.88□□□□□ -0.83
DDX56-203ENST00000421223 GPAT4Q86UL3 456 aa9.88□□□□□ -0.83
DDX56-203ENST00000421223 PPP1R3BQ86XI6 285 aa9.88□□□□□ -0.83
DDX56-203ENST00000421223 LINC00469Q8N7U9 141 aa9.88□□□□□ -0.83
DDX56-203ENST00000421223 APCDD1LQ8NCL9 501 aa9.88□□□□□ -0.83
DDX56-203ENST00000421223 KCTD12Q96CX2 325 aaKnown RBP9.88□□□□□ -0.83
DDX56-203ENST00000421223 RNF170Q96K19 258 aa9.88□□□□□ -0.83
DDX56-203ENST00000421223 B9D1Q9UPM9 204 aa9.88□□□□□ -0.83
DDX56-203ENST00000421223 KIF26BQ2KJY2 2108 aa9.88□□□□□ -0.83
DDX56-203ENST00000421223 SLC43A1O75387 559 aa9.88□□□□□ -0.83
DDX56-203ENST00000421223 RBMS1P29558 406 aaKnown RBP9.88□□□□□ -0.83
DDX56-203ENST00000421223 RPL27P61353 136 aaKnown RBP9.88□□□□□ -0.83
DDX56-203ENST00000421223 BTBD16Q32M84 506 aa9.88□□□□□ -0.83
DDX56-203ENST00000421223 PYHIN1Q6K0P9 492 aa9.88□□□□□ -0.83
DDX56-203ENST00000421223 LRFN4Q6PJG9 635 aa9.88□□□□□ -0.83
DDX56-203ENST00000421223 GRINAQ7Z429 371 aa9.88□□□□□ -0.83
DDX56-203ENST00000421223 CLDN23Q96B33 292 aa9.88□□□□□ -0.83
DDX56-203ENST00000421223 GPX7Q96SL4 187 aaPredicted RBP9.88□□□□□ -0.83
DDX56-203ENST00000421223 COMMD4Q9H0A8 199 aa9.88□□□□□ -0.83
DDX56-203ENST00000421223 MOKQ9UQ07 419 aa9.88□□□□□ -0.83
DDX56-203ENST00000421223 RPH3AQ9Y2J0 694 aaPredicted RBP9.88□□□□□ -0.83
DDX56-203ENST00000421223 CACNG2Q9Y698 323 aa9.88□□□□□ -0.83
DDX56-203ENST00000421223 V9GY05 133 aa9.88□□□□□ -0.83
DDX56-203ENST00000421223 PRSS37A4D1T9 235 aa9.87□□□□□ -0.83
DDX56-203ENST00000421223 UPK3AO75631 287 aa9.87□□□□□ -0.83
DDX56-203ENST00000421223 GATBO75879 557 aaKnown RBP9.87□□□□□ -0.83
DDX56-203ENST00000421223 CELA2AP08217 269 aa9.87□□□□□ -0.83
DDX56-203ENST00000421223 SYPP08247 313 aa9.87□□□□□ -0.83
DDX56-203ENST00000421223 IFNGR1P15260 489 aa9.87□□□□□ -0.83
DDX56-203ENST00000421223 ALOX5APP20292 161 aa9.87□□□□□ -0.83
DDX56-203ENST00000421223 SFTPDP35247 375 aa9.87□□□□□ -0.83
DDX56-203ENST00000421223 SNRPD2P62316 118 aaKnown RBP9.87□□□□□ -0.83
DDX56-203ENST00000421223 STPG1Q5TH74 334 aa9.87□□□□□ -0.83
DDX56-203ENST00000421223 GPR139Q6DWJ6 353 aa9.87□□□□□ -0.83
DDX56-203ENST00000421223 PLPP5Q8NEB5 264 aa9.87□□□□□ -0.83
DDX56-203ENST00000421223 OR10G3Q8NGC4 313 aa9.87□□□□□ -0.83
DDX56-203ENST00000421223 OR2G2Q8NGZ5 317 aa9.87□□□□□ -0.83
DDX56-203ENST00000421223 LRFN5Q96NI6 719 aa9.87□□□□□ -0.83
DDX56-203ENST00000421223 PTDSS2Q9BVG9 487 aa9.87□□□□□ -0.83
DDX56-203ENST00000421223 PPP4R1LQ9P1A2 415 aa9.87□□□□□ -0.83
DDX56-203ENST00000421223 RALGAPA1Q6GYQ0 2036 aa9.87□□□□□ -0.83
DDX56-203ENST00000421223 TRAV8-7A0A075B6U6 113 aa9.87□□□□□ -0.83
DDX56-203ENST00000421223 TRAV1-2A0A0B4J238 106 aa9.87□□□□□ -0.83
DDX56-203ENST00000421223 IFITM5A6NNB3 132 aa9.87□□□□□ -0.83
DDX56-203ENST00000421223 PRSS47A8MTI9 375 aa9.87□□□□□ -0.83
DDX56-203ENST00000421223 NPIPA5E9PKD4 350 aa9.87□□□□□ -0.83
DDX56-203ENST00000421223 GPRIN2O60269 458 aa9.87□□□□□ -0.83
DDX56-203ENST00000421223 ARSBP15848 533 aa9.87□□□□□ -0.83
DDX56-203ENST00000421223 SLC25A1P53007 311 aa9.87□□□□□ -0.83
DDX56-203ENST00000421223 INSM1Q01101 510 aaPredicted RBP9.87□□□□□ -0.83
DDX56-203ENST00000421223 TLE3Q04726 772 aa9.87□□□□□ -0.83
DDX56-203ENST00000421223 IL10RAQ13651 578 aa9.87□□□□□ -0.83
DDX56-203ENST00000421223 EIF2B1Q14232 305 aaKnown RBP9.87□□□□□ -0.83
DDX56-203ENST00000421223 CCDC58Q4VC31 144 aa9.87□□□□□ -0.83
DDX56-203ENST00000421223 EEF1A1P5Q5VTE0 462 aa9.87□□□□□ -0.83
DDX56-203ENST00000421223 CARD17Q5XLA6 110 aa9.87□□□□□ -0.83
DDX56-203ENST00000421223 FAAP20Q6NZ36 180 aa9.87□□□□□ -0.83
DDX56-203ENST00000421223 SYNPRQ8TBG9 265 aa9.87□□□□□ -0.83
DDX56-203ENST00000421223 EDAQ92838 391 aa9.87□□□□□ -0.83
DDX56-203ENST00000421223 JSRP1Q96MG2 331 aaPredicted RBP9.87□□□□□ -0.83
DDX56-203ENST00000421223 DUSP23Q9BVJ7 150 aa9.87□□□□□ -0.83
DDX56-203ENST00000421223 CACNG6Q9BXT2 260 aa9.87□□□□□ -0.83
DDX56-203ENST00000421223 SEMA4CQ9C0C4 833 aa9.87□□□□□ -0.83
DDX56-203ENST00000421223 KCNK15Q9H427 330 aa9.87□□□□□ -0.83
DDX56-203ENST00000421223 ZNF222Q9UK12 451 aa9.87□□□□□ -0.83
DDX56-203ENST00000421223 NPIPA1Q9UND3 350 aa9.87□□□□□ -0.83
DDX56-203ENST00000421223 HRH3Q9Y5N1 445 aa9.87□□□□□ -0.83
DDX56-203ENST00000421223 FKBP7Q9Y680 259 aa9.87□□□□□ -0.83
DDX56-203ENST00000421223 EML5Q05BV3 1969 aa9.87□□□□□ -0.83
DDX56-203ENST00000421223 A0A1W2PNR3 127 aa9.86□□□□□ -0.83
DDX56-203ENST00000421223 TRABD2BA6NFA1 517 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms