RNA–Protein interactions for RNA: ENST00000420453.1

LINC00993-201, long intergenic non-protein coding RNA 993, humanhuman

BASIC

Gene LINC00993, Length 540 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00993-201ENST00000420453 SUMO4Q6EEV6 95 aa4.38□□□□□ -1.71
LINC00993-201ENST00000420453 RPUSD3Q6P087 351 aaKnown RBP4.38□□□□□ -1.71
LINC00993-201ENST00000420453 ULK3Q6PHR2 472 aa4.38□□□□□ -1.71
LINC00993-201ENST00000420453 SHQ1Q6PI26 577 aaKnown RBP4.38□□□□□ -1.71
LINC00993-201ENST00000420453 C5orf46Q6UWT4 87 aa4.38□□□□□ -1.71
LINC00993-201ENST00000420453 DEF8Q6ZN54 512 aa4.38□□□□□ -1.71
LINC00993-201ENST00000420453 Q6ZS92 163 aa4.38□□□□□ -1.71
LINC00993-201ENST00000420453 PLEKHM3Q6ZWE6 761 aa4.38□□□□□ -1.71
LINC00993-201ENST00000420453 GRINAQ7Z429 371 aa4.38□□□□□ -1.71
LINC00993-201ENST00000420453 HIPK1Q86Z02 1210 aa4.38□□□□□ -1.71
LINC00993-201ENST00000420453 RBM45Q8IUH3 476 aaKnown RBP4.38□□□□□ -1.71
LINC00993-201ENST00000420453 RNF113BQ8IZP6 322 aaKnown RBP4.38□□□□□ -1.71
LINC00993-201ENST00000420453 GTPBP8Q8N3Z3 284 aaPredicted RBP4.38□□□□□ -1.71
LINC00993-201ENST00000420453 SVOPLQ8N434 492 aa4.38□□□□□ -1.71
LINC00993-201ENST00000420453 LINC00471Q8N535 108 aa4.38□□□□□ -1.71
LINC00993-201ENST00000420453 TMCO5AQ8N6Q1 288 aa4.38□□□□□ -1.71
LINC00993-201ENST00000420453 GATSQ8NAP1 163 aa4.38□□□□□ -1.71
LINC00993-201ENST00000420453 TSPAN14Q8NG11 270 aa4.38□□□□□ -1.71
LINC00993-201ENST00000420453 OR4K17Q8NGC6 315 aa4.38□□□□□ -1.71
LINC00993-201ENST00000420453 OR4C15Q8NGM1 316 aa4.38□□□□□ -1.71
LINC00993-201ENST00000420453 OR1J4Q8NGS1 313 aa4.38□□□□□ -1.71
LINC00993-201ENST00000420453 VANGL1Q8TAA9 524 aaPredicted RBP4.38□□□□□ -1.71
LINC00993-201ENST00000420453 GPR119Q8TDV5 335 aa4.38□□□□□ -1.71
LINC00993-201ENST00000420453 WIPF2Q8TF74 440 aaPredicted RBP4.38□□□□□ -1.71
LINC00993-201ENST00000420453 SLC38A4Q969I6 547 aa4.38□□□□□ -1.71
LINC00993-201ENST00000420453 RNFT2Q96EX2 444 aa4.38□□□□□ -1.71
LINC00993-201ENST00000420453 SLC41A3Q96GZ6 507 aa4.38□□□□□ -1.71
LINC00993-201ENST00000420453 SIGLEC12Q96PQ1 595 aa4.38□□□□□ -1.71
LINC00993-201ENST00000420453 PKP2Q99959 881 aa4.38□□□□□ -1.71
LINC00993-201ENST00000420453 WFDC6Q9BQY6 131 aa4.38□□□□□ -1.71
LINC00993-201ENST00000420453 FNDC11Q9BVV2 318 aa4.38□□□□□ -1.71
LINC00993-201ENST00000420453 SLC19A3Q9BZV2 496 aa4.38□□□□□ -1.71
LINC00993-201ENST00000420453 OR2B2Q9GZK3 357 aa4.38□□□□□ -1.71
LINC00993-201ENST00000420453 UBQLN3Q9H347 655 aa4.38□□□□□ -1.71
LINC00993-201ENST00000420453 PRORYQ9H606 182 aa4.38□□□□□ -1.71
LINC00993-201ENST00000420453 REEP1Q9H902 201 aa4.38□□□□□ -1.71
LINC00993-201ENST00000420453 NTN4Q9HB63 628 aa4.38□□□□□ -1.71
LINC00993-201ENST00000420453 MAN2C1Q9NTJ4 1040 aa4.38□□□□□ -1.71
LINC00993-201ENST00000420453 DEPPQ9NTK1 212 aa4.38□□□□□ -1.71
LINC00993-201ENST00000420453 ACER3Q9NUN7 267 aa4.38□□□□□ -1.71
LINC00993-201ENST00000420453 MED17Q9NVC6 651 aa4.38□□□□□ -1.71
LINC00993-201ENST00000420453 ANKRD10Q9NXR5 420 aa4.38□□□□□ -1.71
LINC00993-201ENST00000420453 TAS2R10Q9NYW0 307 aa4.38□□□□□ -1.71
LINC00993-201ENST00000420453 SELENONQ9NZV5 590 aa4.38□□□□□ -1.71
LINC00993-201ENST00000420453 RPS6KB2Q9UBS0 482 aa4.38□□□□□ -1.71
LINC00993-201ENST00000420453 B4GALT7Q9UBV7 327 aa4.38□□□□□ -1.71
LINC00993-201ENST00000420453 SAMHD1Q9Y3Z3 626 aaKnown RBP4.38□□□□□ -1.71
LINC00993-201ENST00000420453 LYVE1Q9Y5Y7 322 aa4.38□□□□□ -1.71
LINC00993-201ENST00000420453 APC2O95996 2303 aa4.38□□□□□ -1.71
LINC00993-201ENST00000420453 SPTBN2O15020 2390 aa4.38□□□□□ -1.71
LINC00993-201ENST00000420453 A0A0G2JMM0 328 aa4.37□□□□□ -1.71
LINC00993-201ENST00000420453 TRBV4-1A0A0J9YWV2 114 aa4.37□□□□□ -1.71
LINC00993-201ENST00000420453 A0A1W2PPB8 328 aa4.37□□□□□ -1.71
LINC00993-201ENST00000420453 A0A1W2PRS3 328 aa4.37□□□□□ -1.71
LINC00993-201ENST00000420453 SH3PXD2BA1X283 911 aa4.37□□□□□ -1.71
LINC00993-201ENST00000420453 CXorf65A6NEN9 183 aa4.37□□□□□ -1.71
LINC00993-201ENST00000420453 LINC01548A6NM66 108 aa4.37□□□□□ -1.71
LINC00993-201ENST00000420453 CPSF4LA6NMK7 179 aaKnown RBP4.37□□□□□ -1.71
LINC00993-201ENST00000420453 KIR3DP1A8MWS1 328 aa4.37□□□□□ -1.71
LINC00993-201ENST00000420453 B4DXG7 233 aa4.37□□□□□ -1.71
LINC00993-201ENST00000420453 H0YJX3 145 aa4.37□□□□□ -1.71
LINC00993-201ENST00000420453 TNFRSF11BO00300 401 aa4.37□□□□□ -1.71
LINC00993-201ENST00000420453 GNGT2O14610 69 aa4.37□□□□□ -1.71
LINC00993-201ENST00000420453 ZNF208O43345 1280 aa4.37□□□□□ -1.71
LINC00993-201ENST00000420453 NOL3O60936 208 aaKnown RBP4.37□□□□□ -1.71
LINC00993-201ENST00000420453 E2F6O75461 281 aa4.37□□□□□ -1.71
LINC00993-201ENST00000420453 GLSO94925 669 aaPredicted RBP4.37□□□□□ -1.71
LINC00993-201ENST00000420453 DIRAS1O95057 198 aa4.37□□□□□ -1.71
LINC00993-201ENST00000420453 LYPD3O95274 346 aa4.37□□□□□ -1.71
LINC00993-201ENST00000420453 NUDT14O95848 222 aa4.37□□□□□ -1.71
LINC00993-201ENST00000420453 PLAUP00749 431 aa4.37□□□□□ -1.71
LINC00993-201ENST00000420453 THY1P04216 161 aa4.37□□□□□ -1.71
LINC00993-201ENST00000420453 SFTPCP11686 197 aa4.37□□□□□ -1.71
LINC00993-201ENST00000420453 GP1BBP13224 206 aa4.37□□□□□ -1.71
LINC00993-201ENST00000420453 DPP4P27487 766 aa4.37□□□□□ -1.71
LINC00993-201ENST00000420453 TACR3P29371 465 aa4.37□□□□□ -1.71
LINC00993-201ENST00000420453 RRM2P31350 389 aa4.37□□□□□ -1.71
LINC00993-201ENST00000420453 RYKP34925 604 aa4.37□□□□□ -1.71
LINC00993-201ENST00000420453 IFNGR2P38484 337 aa4.37□□□□□ -1.71
LINC00993-201ENST00000420453 APOBEC1P41238 236 aaKnown RBP4.37□□□□□ -1.71
LINC00993-201ENST00000420453 IDH2P48735 452 aaKnown RBP4.37□□□□□ -1.71
LINC00993-201ENST00000420453 DNASE1L1P49184 302 aa4.37□□□□□ -1.71
LINC00993-201ENST00000420453 CLK1P49759 484 aaKnown RBP4.37□□□□□ -1.71
LINC00993-201ENST00000420453 CCR4P51679 360 aa4.37□□□□□ -1.71
LINC00993-201ENST00000420453 POLR2HP52434 150 aaKnown RBP4.37□□□□□ -1.71
LINC00993-201ENST00000420453 CDH12P55289 794 aa4.37□□□□□ -1.71
LINC00993-201ENST00000420453 ESRRGP62508 458 aa4.37□□□□□ -1.71
LINC00993-201ENST00000420453 HOXC5Q00444 222 aa4.37□□□□□ -1.71
LINC00993-201ENST00000420453 SPIBQ01892 262 aa4.37□□□□□ -1.71
LINC00993-201ENST00000420453 QPRTQ15274 297 aa4.37□□□□□ -1.71
LINC00993-201ENST00000420453 ALG10BQ5I7T1 473 aa4.37□□□□□ -1.71
LINC00993-201ENST00000420453 DCST1Q5T197 706 aa4.37□□□□□ -1.71
LINC00993-201ENST00000420453 ZNF770Q6IQ21 691 aaPredicted RBP4.37□□□□□ -1.71
LINC00993-201ENST00000420453 KRT80Q6KB66 452 aa4.37□□□□□ -1.71
LINC00993-201ENST00000420453 HMBOX1Q6NT76 420 aa4.37□□□□□ -1.71
LINC00993-201ENST00000420453 C3orf33Q6P1S2 294 aa4.37□□□□□ -1.71
LINC00993-201ENST00000420453 NCCRP1Q6ZVX7 275 aaPredicted RBP4.37□□□□□ -1.71
LINC00993-201ENST00000420453 GALNTL5Q7Z4T8 443 aa4.37□□□□□ -1.71
LINC00993-201ENST00000420453 SLC22A16Q86VW1 577 aa4.37□□□□□ -1.71
LINC00993-201ENST00000420453 EPHX4Q8IUS5 362 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms