RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 CHMP1BQ7LBR1 199 aa5.33□□□□□ -1.56
HMGB3-202ENST00000419110 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.33□□□□□ -1.56
HMGB3-202ENST00000419110 ERI1Q8IV48 349 aaKnown RBP5.33□□□□□ -1.56
HMGB3-202ENST00000419110 SLC35F2Q8IXU6 374 aa5.33□□□□□ -1.56
HMGB3-202ENST00000419110 PM20D2Q8IYS1 436 aa5.33□□□□□ -1.56
HMGB3-202ENST00000419110 TMEM99Q8N816 258 aa5.33□□□□□ -1.56
HMGB3-202ENST00000419110 KBTBD8Q8NFY9 601 aa5.33□□□□□ -1.56
HMGB3-202ENST00000419110 OR10H5Q8NGA6 315 aa5.33□□□□□ -1.56
HMGB3-202ENST00000419110 OR4F15Q8NGB8 312 aa5.33□□□□□ -1.56
HMGB3-202ENST00000419110 OR9K2Q8NGE7 335 aa5.33□□□□□ -1.56
HMGB3-202ENST00000419110 OR6N2Q8NGY6 317 aa5.33□□□□□ -1.56
HMGB3-202ENST00000419110 OR10D3Q8NH80 312 aa5.33□□□□□ -1.56
HMGB3-202ENST00000419110 HAVCR2Q8TDQ0 301 aa5.33□□□□□ -1.56
HMGB3-202ENST00000419110 FAM122AQ96E09 287 aa5.33□□□□□ -1.56
HMGB3-202ENST00000419110 INTS14Q96SY0 518 aa5.33□□□□□ -1.56
HMGB3-202ENST00000419110 SF3B5Q9BWJ5 86 aaKnown RBP5.33□□□□□ -1.56
HMGB3-202ENST00000419110 HCAR1Q9BXC0 346 aa5.33□□□□□ -1.56
HMGB3-202ENST00000419110 NMNAT2Q9BZQ4 307 aa5.33□□□□□ -1.56
HMGB3-202ENST00000419110 B3GAT2Q9NPZ5 323 aa5.33□□□□□ -1.56
HMGB3-202ENST00000419110 MED29Q9NX70 200 aa5.33□□□□□ -1.56
HMGB3-202ENST00000419110 TAS2R5Q9NYW4 299 aa5.33□□□□□ -1.56
HMGB3-202ENST00000419110 PTTG2Q9NZH5 202 aa5.33□□□□□ -1.56
HMGB3-202ENST00000419110 VSX1Q9NZR4 365 aaPredicted RBP5.33□□□□□ -1.56
HMGB3-202ENST00000419110 KLHL9Q9P2J3 617 aa5.33□□□□□ -1.56
HMGB3-202ENST00000419110 B3GAT1Q9P2W7 334 aa5.33□□□□□ -1.56
HMGB3-202ENST00000419110 ENPP5Q9UJA9 477 aa5.33□□□□□ -1.56
HMGB3-202ENST00000419110 ZNF346Q9UL40 294 aaKnown RBP5.33□□□□□ -1.56
HMGB3-202ENST00000419110 WASF3Q9UPY6 502 aa5.33□□□□□ -1.56
HMGB3-202ENST00000419110 RCE1Q9Y256 329 aa5.33□□□□□ -1.56
HMGB3-202ENST00000419110 EXOGQ9Y2C4 368 aaKnown RBP5.33□□□□□ -1.56
HMGB3-202ENST00000419110 CAB39Q9Y376 341 aaPredicted RBP5.33□□□□□ -1.56
HMGB3-202ENST00000419110 TMEM14AQ9Y6G1 99 aa5.33□□□□□ -1.56
HMGB3-202ENST00000419110 SVILO95425 2214 aa5.33□□□□□ -1.56
HMGB3-202ENST00000419110 CACNA1CQ13936 2221 aa5.32□□□□□ -1.56
HMGB3-202ENST00000419110 CACNA1AO00555 2505 aa5.32□□□□□ -1.56
HMGB3-202ENST00000419110 TRGV5A0A0B4J1U4 118 aa5.32□□□□□ -1.56
HMGB3-202ENST00000419110 IGHV3-15A0A0B4J1V0 119 aa5.32□□□□□ -1.56
HMGB3-202ENST00000419110 A0A0J9YW62 118 aa5.32□□□□□ -1.56
HMGB3-202ENST00000419110 LOC102725191A0A1B0GVB3 256 aa5.32□□□□□ -1.56
HMGB3-202ENST00000419110 A0A1W2PPL8 197 aa5.32□□□□□ -1.56
HMGB3-202ENST00000419110 SLC22A23A1A5C7 686 aa5.32□□□□□ -1.56
HMGB3-202ENST00000419110 HSPB2A8KAH6 182 aa5.32□□□□□ -1.56
HMGB3-202ENST00000419110 H3BMQ9 156 aa5.32□□□□□ -1.56
HMGB3-202ENST00000419110 CCRL2O00421 344 aa5.32□□□□□ -1.56
HMGB3-202ENST00000419110 SMAD9O15198 467 aaKnown RBP5.32□□□□□ -1.56
HMGB3-202ENST00000419110 SLC22A1O15245 554 aa5.32□□□□□ -1.56
HMGB3-202ENST00000419110 CXCL13O43927 109 aa5.32□□□□□ -1.56
HMGB3-202ENST00000419110 SELENOFO60613 162 aa5.32□□□□□ -1.56
HMGB3-202ENST00000419110 KHDRBS3O75525 346 aaKnown RBP5.32□□□□□ -1.56
HMGB3-202ENST00000419110 OPN1LWP04000 364 aa5.32□□□□□ -1.56
HMGB3-202ENST00000419110 SCG5P05408 212 aa5.32□□□□□ -1.56
HMGB3-202ENST00000419110 ADRB1P08588 477 aa5.32□□□□□ -1.56
HMGB3-202ENST00000419110 CELA3AP09093 270 aa5.32□□□□□ -1.56
HMGB3-202ENST00000419110 SPARCP09486 303 aa5.32□□□□□ -1.56
HMGB3-202ENST00000419110 OR2T7P0C7T2 308 aa5.32□□□□□ -1.56
HMGB3-202ENST00000419110 PGA4P0DJD7 388 aa5.32□□□□□ -1.56
HMGB3-202ENST00000419110 PGA3P0DJD8 388 aa5.32□□□□□ -1.56
HMGB3-202ENST00000419110 CLUP10909 449 aa5.32□□□□□ -1.56
HMGB3-202ENST00000419110 CTLA4P16410 223 aa5.32□□□□□ -1.56
HMGB3-202ENST00000419110 CD36P16671 472 aa5.32□□□□□ -1.56
HMGB3-202ENST00000419110 ZNF708P17019 499 aa5.32□□□□□ -1.56
HMGB3-202ENST00000419110 CDKN2AP42771 156 aaKnown RBP5.32□□□□□ -1.56
HMGB3-202ENST00000419110 ENTPD1P49961 510 aa5.32□□□□□ -1.56
HMGB3-202ENST00000419110 LHX2P50458 406 aa5.32□□□□□ -1.56
HMGB3-202ENST00000419110 ETV1P50549 477 aa5.32□□□□□ -1.56
HMGB3-202ENST00000419110 TMBIM6P55061 237 aa5.32□□□□□ -1.56
HMGB3-202ENST00000419110 CLDN17P56750 224 aa5.32□□□□□ -1.56
HMGB3-202ENST00000419110 CLDN20P56880 219 aa5.32□□□□□ -1.56
HMGB3-202ENST00000419110 BDH1Q02338 343 aa5.32□□□□□ -1.56
HMGB3-202ENST00000419110 MRPL28Q13084 256 aaKnown RBP5.32□□□□□ -1.56
HMGB3-202ENST00000419110 SPHARQ15513 63 aa5.32□□□□□ -1.56
HMGB3-202ENST00000419110 HSPB2Q16082 182 aa5.32□□□□□ -1.56
HMGB3-202ENST00000419110 TSTQ16762 297 aaKnown RBP5.32□□□□□ -1.56
HMGB3-202ENST00000419110 ARMCX4Q5H9R4 360 aa5.32□□□□□ -1.56
HMGB3-202ENST00000419110 FOXB2Q5VYV0 432 aa5.32□□□□□ -1.56
HMGB3-202ENST00000419110 ZNF544Q6NX49 715 aa5.32□□□□□ -1.56
HMGB3-202ENST00000419110 ZNF322Q6U7Q0 402 aaPredicted RBP5.32□□□□□ -1.56
HMGB3-202ENST00000419110 B3GNT6Q6ZMB0 384 aa5.32□□□□□ -1.56
HMGB3-202ENST00000419110 FCRLAQ7L513 359 aa5.32□□□□□ -1.56
HMGB3-202ENST00000419110 SLC16A9Q7RTY1 509 aa5.32□□□□□ -1.56
HMGB3-202ENST00000419110 MCEMP1Q8IX19 187 aa5.32□□□□□ -1.56
HMGB3-202ENST00000419110 SYS1Q8N2H4 156 aa5.32□□□□□ -1.56
HMGB3-202ENST00000419110 NANOGP1Q8N7R0 232 aa5.32□□□□□ -1.56
HMGB3-202ENST00000419110 OR51L1Q8NGJ5 315 aa5.32□□□□□ -1.56
HMGB3-202ENST00000419110 OR6N1Q8NGY5 312 aa5.32□□□□□ -1.56
HMGB3-202ENST00000419110 OR2T27Q8NH04 317 aa5.32□□□□□ -1.56
HMGB3-202ENST00000419110 OR6X1Q8NH79 312 aa5.32□□□□□ -1.56
HMGB3-202ENST00000419110 NEIL3Q8TAT5 605 aa5.32□□□□□ -1.56
HMGB3-202ENST00000419110 ABTB1Q969K4 478 aaPredicted RBP5.32□□□□□ -1.56
HMGB3-202ENST00000419110 ZNF837Q96EG3 531 aaPredicted RBP5.32□□□□□ -1.56
HMGB3-202ENST00000419110 SLC25A44Q96H78 314 aaPredicted RBP5.32□□□□□ -1.56
HMGB3-202ENST00000419110 ADGRG7Q96K78 797 aa5.32□□□□□ -1.56
HMGB3-202ENST00000419110 COG8Q96MW5 612 aa5.32□□□□□ -1.56
HMGB3-202ENST00000419110 OPALINQ96PE5 141 aa5.32□□□□□ -1.56
HMGB3-202ENST00000419110 RBP7Q96R05 134 aa5.32□□□□□ -1.56
HMGB3-202ENST00000419110 TBX5Q99593 518 aa5.32□□□□□ -1.56
HMGB3-202ENST00000419110 MGLLQ99685 303 aa5.32□□□□□ -1.56
HMGB3-202ENST00000419110 TTYH2Q9BSA4 534 aa5.32□□□□□ -1.56
HMGB3-202ENST00000419110 SRXN1Q9BYN0 137 aa5.32□□□□□ -1.56
HMGB3-202ENST00000419110 PRRG4Q9BZD6 226 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms