RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 THRBP10828 461 aa15.41■□□□□ 0.06
CPNE1-210ENST00000416778 FUT4P22083 530 aa15.41■□□□□ 0.06
CPNE1-210ENST00000416778 GLRXP35754 106 aa15.41■□□□□ 0.06
CPNE1-210ENST00000416778 AQP2P41181 271 aa15.41■□□□□ 0.06
CPNE1-210ENST00000416778 SNTB2Q13425 540 aaKnown RBP15.41■□□□□ 0.06
CPNE1-210ENST00000416778 FXNQ16595 210 aa15.41■□□□□ 0.06
CPNE1-210ENST00000416778 POU5F2Q8N7G0 328 aa15.41■□□□□ 0.06
CPNE1-210ENST00000416778 OR2T12Q8NG77 320 aa15.41■□□□□ 0.06
CPNE1-210ENST00000416778 NEU4Q8WWR8 484 aaPredicted RBP15.41■□□□□ 0.06
CPNE1-210ENST00000416778 MCHR2Q969V1 340 aa15.41■□□□□ 0.06
CPNE1-210ENST00000416778 RCN3Q96D15 328 aa15.41■□□□□ 0.06
CPNE1-210ENST00000416778 SH3GL3Q99963 347 aa15.41■□□□□ 0.06
CPNE1-210ENST00000416778 A4GNTQ9UNA3 340 aa15.41■□□□□ 0.06
CPNE1-210ENST00000416778 SPEF1Q9Y4P9 236 aa15.41■□□□□ 0.06
CPNE1-210ENST00000416778 CHD3Q12873 2000 aaKnown RBP15.41■□□□□ 0.06
CPNE1-210ENST00000416778 STAMBPO95630 424 aa15.4■□□□□ 0.06
CPNE1-210ENST00000416778 ADRA2AP08913 450 aa15.4■□□□□ 0.06
CPNE1-210ENST00000416778 MDH1P40925 334 aaKnown RBP15.4■□□□□ 0.06
CPNE1-210ENST00000416778 ARMC4Q5T2S8 1044 aa15.4■□□□□ 0.06
CPNE1-210ENST00000416778 NANOGNBQ7Z5D8 188 aa15.4■□□□□ 0.06
CPNE1-210ENST00000416778 CDK20Q8IZL9 346 aa15.4■□□□□ 0.06
CPNE1-210ENST00000416778 MOSPD2Q8NHP6 518 aa15.4■□□□□ 0.06
CPNE1-210ENST00000416778 MRPL24Q96A35 216 aaKnown RBP15.4■□□□□ 0.06
CPNE1-210ENST00000416778 TPD52L3Q96J77 140 aa15.4■□□□□ 0.06
CPNE1-210ENST00000416778 ZNF347Q96SE7 839 aa15.4■□□□□ 0.06
CPNE1-210ENST00000416778 KCNK17Q96T54 332 aa15.4■□□□□ 0.06
CPNE1-210ENST00000416778 PIMREGQ9BSJ6 248 aa15.4■□□□□ 0.06
CPNE1-210ENST00000416778 MRPL37Q9BZE1 423 aaKnown RBP15.4■□□□□ 0.06
CPNE1-210ENST00000416778 INIPQ9NRY2 104 aa15.4■□□□□ 0.06
CPNE1-210ENST00000416778 TMEM160Q9NX00 188 aa15.4■□□□□ 0.06
CPNE1-210ENST00000416778 AP3M1Q9Y2T2 418 aa15.4■□□□□ 0.06
CPNE1-210ENST00000416778 MXRA5Q9NR99 2828 aa15.4■□□□□ 0.06
CPNE1-210ENST00000416778 SVEP1Q4LDE5 3571 aa15.4■□□□□ 0.06
CPNE1-210ENST00000416778 IGHV4-61A0A0C4DH41 118 aa15.39■□□□□ 0.05
CPNE1-210ENST00000416778 A0A1W2PRG6 482 aa15.39■□□□□ 0.05
CPNE1-210ENST00000416778 CENPBD1B2RD01 187 aa15.39■□□□□ 0.05
CPNE1-210ENST00000416778 TRMUO75648 421 aaKnown RBP15.39■□□□□ 0.05
CPNE1-210ENST00000416778 RAB36O95755 333 aa15.39■□□□□ 0.05
CPNE1-210ENST00000416778 IGHG1P01857 330 aa15.39■□□□□ 0.05
CPNE1-210ENST00000416778 COX4I1P13073 169 aa15.39■□□□□ 0.05
CPNE1-210ENST00000416778 DAOP14920 347 aa15.39■□□□□ 0.05
CPNE1-210ENST00000416778 ACADSP16219 412 aa15.39■□□□□ 0.05
CPNE1-210ENST00000416778 GIFP27352 417 aa15.39■□□□□ 0.05
CPNE1-210ENST00000416778 ZNF133P52736 654 aaPredicted RBP15.39■□□□□ 0.05
CPNE1-210ENST00000416778 GGTLC2Q14390 218 aa15.39■□□□□ 0.05
CPNE1-210ENST00000416778 CARTPTQ16568 116 aa15.39■□□□□ 0.05
CPNE1-210ENST00000416778 LRRC23Q53EV4 343 aaPredicted RBP15.39■□□□□ 0.05
CPNE1-210ENST00000416778 ZNF786Q8N393 782 aa15.39■□□□□ 0.05
CPNE1-210ENST00000416778 SYT14Q8NB59 555 aa15.39■□□□□ 0.05
CPNE1-210ENST00000416778 ZNF540Q8NDQ6 660 aa15.39■□□□□ 0.05
CPNE1-210ENST00000416778 OR4K5Q8NGD3 323 aa15.39■□□□□ 0.05
CPNE1-210ENST00000416778 ASB10Q8WXI3 467 aa15.39■□□□□ 0.05
CPNE1-210ENST00000416778 FBXL3Q9UKT7 428 aa15.39■□□□□ 0.05
CPNE1-210ENST00000416778 MED31Q9Y3C7 131 aa15.39■□□□□ 0.05
CPNE1-210ENST00000416778 SNX13Q9Y5W8 968 aa15.39■□□□□ 0.05
CPNE1-210ENST00000416778 RTTNQ86VV8 2226 aa15.39■□□□□ 0.05
CPNE1-210ENST00000416778 CUBNO60494 3623 aa15.38■□□□□ 0.05
CPNE1-210ENST00000416778 HTR3EA5X5Y0 456 aa15.38■□□□□ 0.05
CPNE1-210ENST00000416778 GZMKP49863 264 aa15.38■□□□□ 0.05
CPNE1-210ENST00000416778 CLRN1P58418 232 aa15.38■□□□□ 0.05
CPNE1-210ENST00000416778 MYBPC1Q00872 1141 aa15.38■□□□□ 0.05
CPNE1-210ENST00000416778 LIPEQ05469 1076 aa15.38■□□□□ 0.05
CPNE1-210ENST00000416778 ST3GAL3Q11203 375 aa15.38■□□□□ 0.05
CPNE1-210ENST00000416778 CHRFAM7AQ494W8 412 aa15.38■□□□□ 0.05
CPNE1-210ENST00000416778 NRN1LQ496H8 165 aa15.38■□□□□ 0.05
CPNE1-210ENST00000416778 C8orf82Q6P1X6 216 aaPredicted RBP15.38■□□□□ 0.05
CPNE1-210ENST00000416778 LRP11Q86VZ4 500 aa15.38■□□□□ 0.05
CPNE1-210ENST00000416778 NMD3Q96D46 503 aaKnown RBP15.38■□□□□ 0.05
CPNE1-210ENST00000416778 HOPXQ9BPY8 73 aaPredicted RBP15.38■□□□□ 0.05
CPNE1-210ENST00000416778 REV1Q9UBZ9 1251 aa15.38■□□□□ 0.05
CPNE1-210ENST00000416778 FFAR1O14842 300 aa15.37■□□□□ 0.05
CPNE1-210ENST00000416778 SYNGR3O43761 229 aa15.37■□□□□ 0.05
CPNE1-210ENST00000416778 MGRN1O60291 552 aa15.37■□□□□ 0.05
CPNE1-210ENST00000416778 CCDC22O60826 627 aa15.37■□□□□ 0.05
CPNE1-210ENST00000416778 ENTPD5O75356 428 aa15.37■□□□□ 0.05
CPNE1-210ENST00000416778 FARS2O95363 451 aaKnown RBP15.37■□□□□ 0.05
CPNE1-210ENST00000416778 YAP1P46937 504 aaKnown RBP15.37■□□□□ 0.05
CPNE1-210ENST00000416778 IQCCQ4KMZ1 466 aa15.37■□□□□ 0.05
CPNE1-210ENST00000416778 HSP90B2PQ58FF3 399 aa15.37■□□□□ 0.05
CPNE1-210ENST00000416778 GKAP1Q5VSY0 366 aaPredicted RBP15.37■□□□□ 0.05
CPNE1-210ENST00000416778 VTCN1Q7Z7D3 282 aa15.37■□□□□ 0.05
CPNE1-210ENST00000416778 DPPA2Q7Z7J5 298 aa15.37■□□□□ 0.05
CPNE1-210ENST00000416778 TREML1Q86YW5 311 aa15.37■□□□□ 0.05
CPNE1-210ENST00000416778 UBASH3BQ8TF42 649 aa15.37■□□□□ 0.05
CPNE1-210ENST00000416778 MSI2Q96DH6 328 aaKnown RBP15.37■□□□□ 0.05
CPNE1-210ENST00000416778 BPESC1Q9GZL8 116 aa15.37■□□□□ 0.05
CPNE1-210ENST00000416778 TXNIPQ9H3M7 391 aa15.37■□□□□ 0.05
CPNE1-210ENST00000416778 EFCAB1Q9HAE3 211 aa15.37■□□□□ 0.05
CPNE1-210ENST00000416778 MED4Q9NPJ6 270 aa15.37■□□□□ 0.05
CPNE1-210ENST00000416778 NPIPB13A6NJU9 1138 aa15.36■□□□□ 0.05
CPNE1-210ENST00000416778 NPIPB4C9JG80 1138 aa15.36■□□□□ 0.05
CPNE1-210ENST00000416778 PIP5K1CO60331 668 aa15.36■□□□□ 0.05
CPNE1-210ENST00000416778 LMX1BO60663 402 aa15.36■□□□□ 0.05
CPNE1-210ENST00000416778 ERCC1P07992 297 aaPredicted RBP15.36■□□□□ 0.05
CPNE1-210ENST00000416778 MMP7P09237 267 aaPredicted RBP15.36■□□□□ 0.05
CPNE1-210ENST00000416778 ZNF23P17027 643 aa15.36■□□□□ 0.05
CPNE1-210ENST00000416778 MAKP20794 623 aa15.36■□□□□ 0.05
CPNE1-210ENST00000416778 DAP3P51398 398 aaKnown RBP15.36■□□□□ 0.05
CPNE1-210ENST00000416778 SEC24CP53992 1094 aa15.36■□□□□ 0.05
CPNE1-210ENST00000416778 GALK2Q01415 458 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms