RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 SYNGR3O43761 229 aa15.16■□□□□ 0.02
PDLIM2-208ENST00000416159 KRT34O76011 436 aa15.16■□□□□ 0.02
PDLIM2-208ENST00000416159 OR7A10O76100 309 aa15.16■□□□□ 0.02
PDLIM2-208ENST00000416159 OR5F1O95221 314 aa15.16■□□□□ 0.02
PDLIM2-208ENST00000416159 IGHG1P01857 330 aa15.16■□□□□ 0.02
PDLIM2-208ENST00000416159 SERPINA5P05154 406 aa15.16■□□□□ 0.02
PDLIM2-208ENST00000416159 QDPRP09417 244 aa15.16■□□□□ 0.02
PDLIM2-208ENST00000416159 PGA4P0DJD7 388 aa15.16■□□□□ 0.02
PDLIM2-208ENST00000416159 PGA3P0DJD8 388 aa15.16■□□□□ 0.02
PDLIM2-208ENST00000416159 CLRN1P58418 232 aa15.16■□□□□ 0.02
PDLIM2-208ENST00000416159 DEF8Q6ZN54 512 aa15.16■□□□□ 0.02
PDLIM2-208ENST00000416159 HDDC2Q7Z4H3 204 aa15.16■□□□□ 0.02
PDLIM2-208ENST00000416159 NKAIN4Q8IVV8 208 aa15.16■□□□□ 0.02
PDLIM2-208ENST00000416159 UBASH3BQ8TF42 649 aa15.16■□□□□ 0.02
PDLIM2-208ENST00000416159 C10orf82Q8WW14 230 aa15.16■□□□□ 0.02
PDLIM2-208ENST00000416159 SGTBQ96EQ0 304 aa15.16■□□□□ 0.02
PDLIM2-208ENST00000416159 MRPL37Q9BZE1 423 aaKnown RBP15.16■□□□□ 0.02
PDLIM2-208ENST00000416159 MS4A5Q9H3V2 200 aa15.16■□□□□ 0.02
PDLIM2-208ENST00000416159 REV1Q9UBZ9 1251 aa15.16■□□□□ 0.02
PDLIM2-208ENST00000416159 RIMS3Q9UJD0 308 aa15.16■□□□□ 0.02
PDLIM2-208ENST00000416159 IGFBP1P08833 259 aaPredicted RBP15.15■□□□□ 0.02
PDLIM2-208ENST00000416159 PATE4P0C8F1 98 aa15.15■□□□□ 0.02
PDLIM2-208ENST00000416159 THRBP10828 461 aa15.15■□□□□ 0.02
PDLIM2-208ENST00000416159 TNFRSF1BP20333 461 aa15.15■□□□□ 0.02
PDLIM2-208ENST00000416159 UGT2B15P54855 530 aa15.15■□□□□ 0.02
PDLIM2-208ENST00000416159 RPL18Q07020 188 aaKnown RBP15.15■□□□□ 0.02
PDLIM2-208ENST00000416159 PIN1Q13526 163 aaPredicted RBP15.15■□□□□ 0.02
PDLIM2-208ENST00000416159 FXNQ16595 210 aa15.15■□□□□ 0.02
PDLIM2-208ENST00000416159 NRN1LQ496H8 165 aa15.15■□□□□ 0.02
PDLIM2-208ENST00000416159 TMEM53Q6P2H8 277 aa15.15■□□□□ 0.02
PDLIM2-208ENST00000416159 FGFBP3Q8TAT2 258 aa15.15■□□□□ 0.02
PDLIM2-208ENST00000416159 TMEM255BQ8WV15 326 aa15.15■□□□□ 0.02
PDLIM2-208ENST00000416159 TMEM239Q8WW34 195 aa15.15■□□□□ 0.02
PDLIM2-208ENST00000416159 LIPHQ8WWY8 451 aa15.15■□□□□ 0.02
PDLIM2-208ENST00000416159 MSI2Q96DH6 328 aaKnown RBP15.15■□□□□ 0.02
PDLIM2-208ENST00000416159 RNF121Q9H920 327 aa15.15■□□□□ 0.02
PDLIM2-208ENST00000416159 INIPQ9NRY2 104 aa15.15■□□□□ 0.02
PDLIM2-208ENST00000416159 STX18Q9P2W9 335 aaKnown RBP15.15■□□□□ 0.02
PDLIM2-208ENST00000416159 SLC7A8Q9UHI5 535 aa15.15■□□□□ 0.02
PDLIM2-208ENST00000416159 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.15■□□□□ 0.02
PDLIM2-208ENST00000416159 COL6A5A8TX70 2615 aa15.14■□□□□ 0.01
PDLIM2-208ENST00000416159 SLC22A23A1A5C7 686 aa15.14■□□□□ 0.01
PDLIM2-208ENST00000416159 RNF212BA8MTL3 300 aa15.14■□□□□ 0.01
PDLIM2-208ENST00000416159 FAM220BPB1ANY3 271 aa15.14■□□□□ 0.01
PDLIM2-208ENST00000416159 MCIDASD6RGH6 385 aa15.14■□□□□ 0.01
PDLIM2-208ENST00000416159 M0R233 179 aa15.14■□□□□ 0.01
PDLIM2-208ENST00000416159 MGRN1O60291 552 aa15.14■□□□□ 0.01
PDLIM2-208ENST00000416159 F13BP05160 661 aa15.14■□□□□ 0.01
PDLIM2-208ENST00000416159 KDELR2P33947 212 aa15.14■□□□□ 0.01
PDLIM2-208ENST00000416159 ZNF84P51523 738 aa15.14■□□□□ 0.01
PDLIM2-208ENST00000416159 CHN2P52757 468 aa15.14■□□□□ 0.01
PDLIM2-208ENST00000416159 SF3A3Q12874 501 aaKnown RBP eCLIP15.14■□□□□ 0.01
PDLIM2-208ENST00000416159 HIST3H3Q16695 136 aa15.14■□□□□ 0.01
PDLIM2-208ENST00000416159 MSMPQ1L6U9 139 aa15.14■□□□□ 0.01
PDLIM2-208ENST00000416159 CYBRD1Q53TN4 286 aa15.14■□□□□ 0.01
PDLIM2-208ENST00000416159 CGB2Q6NT52 195 aa15.14■□□□□ 0.01
PDLIM2-208ENST00000416159 PFN4Q8NHR9 129 aa15.14■□□□□ 0.01
PDLIM2-208ENST00000416159 TMEM158Q8WZ71 300 aa15.14■□□□□ 0.01
PDLIM2-208ENST00000416159 MCHR2Q969V1 340 aa15.14■□□□□ 0.01
PDLIM2-208ENST00000416159 SH3GL3Q99963 347 aa15.14■□□□□ 0.01
PDLIM2-208ENST00000416159 MRPL13Q9BYD1 178 aaKnown RBP15.14■□□□□ 0.01
PDLIM2-208ENST00000416159 C1orf198Q9H425 327 aa15.14■□□□□ 0.01
PDLIM2-208ENST00000416159 AP3M1Q9Y2T2 418 aa15.14■□□□□ 0.01
PDLIM2-208ENST00000416159 MED31Q9Y3C7 131 aa15.14■□□□□ 0.01
PDLIM2-208ENST00000416159 CAPN7Q9Y6W3 813 aa15.14■□□□□ 0.01
PDLIM2-208ENST00000416159 SLC22A2O15244 555 aa15.13■□□□□ 0.01
PDLIM2-208ENST00000416159 SHOX2O60902 331 aaPredicted RBP15.13■□□□□ 0.01
PDLIM2-208ENST00000416159 TGFAP01135 160 aa15.13■□□□□ 0.01
PDLIM2-208ENST00000416159 PTHP01270 115 aa15.13■□□□□ 0.01
PDLIM2-208ENST00000416159 TACSTD2P09758 323 aa15.13■□□□□ 0.01
PDLIM2-208ENST00000416159 ACADSP16219 412 aa15.13■□□□□ 0.01
PDLIM2-208ENST00000416159 IGFBP5P24593 272 aa15.13■□□□□ 0.01
PDLIM2-208ENST00000416159 IFNA8P32881 189 aa15.13■□□□□ 0.01
PDLIM2-208ENST00000416159 AQP2P41181 271 aa15.13■□□□□ 0.01
PDLIM2-208ENST00000416159 OR1E2P47887 323 aa15.13■□□□□ 0.01
PDLIM2-208ENST00000416159 DAP3P51398 398 aaKnown RBP15.13■□□□□ 0.01
PDLIM2-208ENST00000416159 SLC36A2Q495M3 483 aa15.13■□□□□ 0.01
PDLIM2-208ENST00000416159 LRRC23Q53EV4 343 aaPredicted RBP15.13■□□□□ 0.01
PDLIM2-208ENST00000416159 SLC16A14Q7RTX9 510 aa15.13■□□□□ 0.01
PDLIM2-208ENST00000416159 ZNF584Q8IVC4 421 aa15.13■□□□□ 0.01
PDLIM2-208ENST00000416159 ARIH2OSQ8N7S6 290 aa15.13■□□□□ 0.01
PDLIM2-208ENST00000416159 SLC30A7Q8NEW0 376 aa15.13■□□□□ 0.01
PDLIM2-208ENST00000416159 NOXO1Q8NFA2 376 aa15.13■□□□□ 0.01
PDLIM2-208ENST00000416159 OR2T12Q8NG77 320 aa15.13■□□□□ 0.01
PDLIM2-208ENST00000416159 OR4K5Q8NGD3 323 aa15.13■□□□□ 0.01
PDLIM2-208ENST00000416159 ASB10Q8WXI3 467 aa15.13■□□□□ 0.01
PDLIM2-208ENST00000416159 HPS1Q92902 700 aa15.13■□□□□ 0.01
PDLIM2-208ENST00000416159 ZNF347Q96SE7 839 aa15.13■□□□□ 0.01
PDLIM2-208ENST00000416159 SEPHS2Q99611 448 aa15.13■□□□□ 0.01
PDLIM2-208ENST00000416159 SYT3Q9BQG1 590 aa15.13■□□□□ 0.01
PDLIM2-208ENST00000416159 TPK1Q9H3S4 243 aa15.13■□□□□ 0.01
PDLIM2-208ENST00000416159 C20orf141Q9NUB4 165 aa15.13■□□□□ 0.01
PDLIM2-208ENST00000416159 ELOVL7A1L3X0 281 aa15.12■□□□□ 0.01
PDLIM2-208ENST00000416159 HTR3EA5X5Y0 456 aa15.12■□□□□ 0.01
PDLIM2-208ENST00000416159 LILRA1O75019 489 aa15.12■□□□□ 0.01
PDLIM2-208ENST00000416159 TRMUO75648 421 aaKnown RBP15.12■□□□□ 0.01
PDLIM2-208ENST00000416159 TSPAN19P0C672 248 aa15.12■□□□□ 0.01
PDLIM2-208ENST00000416159 THBS2P35442 1172 aa15.12■□□□□ 0.01
PDLIM2-208ENST00000416159 SELENOWP63302 87 aa15.12■□□□□ 0.01
PDLIM2-208ENST00000416159 MYBPC1Q00872 1141 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms