RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 WIPI2Q9Y4P8 454 aa13.1□□□□□ -0.31
DDX56-202ENST00000415758 PPIAL4EA0A075B759 164 aa13.09□□□□□ -0.31
DDX56-202ENST00000415758 PPIAL4CA0A0B4J2A2 164 aa13.09□□□□□ -0.31
DDX56-202ENST00000415758 C5orf58C9J3I9 102 aa13.09□□□□□ -0.31
DDX56-202ENST00000415758 CLDN25C9JDP6 229 aa13.09□□□□□ -0.31
DDX56-202ENST00000415758 LRRN3E7EW58 273 aa13.09□□□□□ -0.31
DDX56-202ENST00000415758 PPIAL4DF5H284 164 aa13.09□□□□□ -0.31
DDX56-202ENST00000415758 SNNO75324 88 aaPredicted RBP13.09□□□□□ -0.31
DDX56-202ENST00000415758 PRSS23O95084 383 aa13.09□□□□□ -0.31
DDX56-202ENST00000415758 MT-ATP6P00846 226 aa13.09□□□□□ -0.31
DDX56-202ENST00000415758 IGHV3-13P01766 116 aa13.09□□□□□ -0.31
DDX56-202ENST00000415758 FAM157BP0CG42 384 aa13.09□□□□□ -0.31
DDX56-202ENST00000415758 PPIAL4FP0DN26 164 aa13.09□□□□□ -0.31
DDX56-202ENST00000415758 AHCYP23526 432 aa13.09□□□□□ -0.31
DDX56-202ENST00000415758 BIDP55957 195 aa13.09□□□□□ -0.31
DDX56-202ENST00000415758 RBBP4Q09028 425 aa13.09□□□□□ -0.31
DDX56-202ENST00000415758 ZP4Q12836 540 aa13.09□□□□□ -0.31
DDX56-202ENST00000415758 OR1Q1Q15612 314 aa13.09□□□□□ -0.31
DDX56-202ENST00000415758 HFEQ30201 348 aa13.09□□□□□ -0.31
DDX56-202ENST00000415758 KRT71Q3SY84 523 aa13.09□□□□□ -0.31
DDX56-202ENST00000415758 NRN1LQ496H8 165 aa13.09□□□□□ -0.31
DDX56-202ENST00000415758 REEP3Q6NUK4 255 aa13.09□□□□□ -0.31
DDX56-202ENST00000415758 LINC00114Q6XXX2 140 aa13.09□□□□□ -0.31
DDX56-202ENST00000415758 USP51Q70EK9 711 aa13.09□□□□□ -0.31
DDX56-202ENST00000415758 KRT73Q86Y46 540 aa13.09□□□□□ -0.31
DDX56-202ENST00000415758 MIER2Q8N344 545 aa13.09□□□□□ -0.31
DDX56-202ENST00000415758 OR5J2Q8NH18 312 aa13.09□□□□□ -0.31
DDX56-202ENST00000415758 RAB1CQ92928 201 aa13.09□□□□□ -0.31
DDX56-202ENST00000415758 TIMD4Q96H15 378 aa13.09□□□□□ -0.31
DDX56-202ENST00000415758 SH3GL3Q99963 347 aa13.09□□□□□ -0.31
DDX56-202ENST00000415758 EVA1AQ9H8M9 152 aa13.09□□□□□ -0.31
DDX56-202ENST00000415758 DECR2Q9NUI1 292 aa13.09□□□□□ -0.31
DDX56-202ENST00000415758 TMEM38BQ9NVV0 291 aa13.09□□□□□ -0.31
DDX56-202ENST00000415758 GMEB1Q9Y692 573 aa13.09□□□□□ -0.31
DDX56-202ENST00000415758 DHHO43323 396 aa13.08□□□□□ -0.32
DDX56-202ENST00000415758 ZNF500O60304 480 aaPredicted RBP13.08□□□□□ -0.32
DDX56-202ENST00000415758 MFN2O95140 757 aa13.08□□□□□ -0.32
DDX56-202ENST00000415758 FARS2O95363 451 aaKnown RBP13.08□□□□□ -0.32
DDX56-202ENST00000415758 PTHP01270 115 aa13.08□□□□□ -0.32
DDX56-202ENST00000415758 ADORA3P0DMS8 318 aa13.08□□□□□ -0.32
DDX56-202ENST00000415758 ARAFP10398 606 aa13.08□□□□□ -0.32
DDX56-202ENST00000415758 CCL2P13500 99 aa13.08□□□□□ -0.32
DDX56-202ENST00000415758 CDH12P55289 794 aa13.08□□□□□ -0.32
DDX56-202ENST00000415758 PDLIM3Q53GG5 364 aaPredicted RBP13.08□□□□□ -0.32
DDX56-202ENST00000415758 FAM209AQ5JX71 171 aa13.08□□□□□ -0.32
DDX56-202ENST00000415758 NXNQ6DKJ4 435 aa13.08□□□□□ -0.32
DDX56-202ENST00000415758 SLC35D2Q76EJ3 337 aa13.08□□□□□ -0.32
DDX56-202ENST00000415758 RETREG3Q86VR2 466 aa13.08□□□□□ -0.32
DDX56-202ENST00000415758 MREGQ8N565 214 aa13.08□□□□□ -0.32
DDX56-202ENST00000415758 BHLHE22Q8NFJ8 381 aaPredicted RBP13.08□□□□□ -0.32
DDX56-202ENST00000415758 OR9I1Q8NGQ6 314 aa13.08□□□□□ -0.32
DDX56-202ENST00000415758 OR1J2Q8NGS2 313 aa13.08□□□□□ -0.32
DDX56-202ENST00000415758 NFKBIDQ8NI38 313 aa13.08□□□□□ -0.32
DDX56-202ENST00000415758 ZNF566Q969W8 418 aa13.08□□□□□ -0.32
DDX56-202ENST00000415758 LRRC58Q96CX6 371 aa13.08□□□□□ -0.32
DDX56-202ENST00000415758 SLC25A44Q96H78 314 aaPredicted RBP13.08□□□□□ -0.32
DDX56-202ENST00000415758 CDH20Q9HBT6 801 aa13.08□□□□□ -0.32
DDX56-202ENST00000415758 PRORSD1PA6NEY8 169 aa13.07□□□□□ -0.32
DDX56-202ENST00000415758 MGRN1O60291 552 aa13.07□□□□□ -0.32
DDX56-202ENST00000415758 MT-ND5P03915 603 aa13.07□□□□□ -0.32
DDX56-202ENST00000415758 LCKP06239 509 aa13.07□□□□□ -0.32
DDX56-202ENST00000415758 PRTN3P24158 256 aa13.07□□□□□ -0.32
DDX56-202ENST00000415758 RGS8P57771 180 aaPredicted RBP13.07□□□□□ -0.32
DDX56-202ENST00000415758 ERVS71-1P61550 626 aa13.07□□□□□ -0.32
DDX56-202ENST00000415758 NCALDP61601 193 aa13.07□□□□□ -0.32
DDX56-202ENST00000415758 CDK6Q00534 326 aa13.07□□□□□ -0.32
DDX56-202ENST00000415758 TBC1D28Q2M2D7 210 aa13.07□□□□□ -0.32
DDX56-202ENST00000415758 TMEM53Q6P2H8 277 aa13.07□□□□□ -0.32
DDX56-202ENST00000415758 TREML1Q86YW5 311 aa13.07□□□□□ -0.32
DDX56-202ENST00000415758 C10orf53Q8N6V4 93 aa13.07□□□□□ -0.32
DDX56-202ENST00000415758 WFDC6Q9BQY6 131 aa13.07□□□□□ -0.32
DDX56-202ENST00000415758 LRMDAQ9H2I8 198 aa13.07□□□□□ -0.32
DDX56-202ENST00000415758 SAP30LQ9HAJ7 183 aa13.07□□□□□ -0.32
DDX56-202ENST00000415758 KCNK9Q9NPC2 374 aa13.07□□□□□ -0.32
DDX56-202ENST00000415758 TAS2R5Q9NYW4 299 aa13.07□□□□□ -0.32
DDX56-202ENST00000415758 SLC25A37Q9NYZ2 338 aa13.07□□□□□ -0.32
DDX56-202ENST00000415758 PPIAL4AQ9Y536 164 aa13.07□□□□□ -0.32
DDX56-202ENST00000415758 CACNG2Q9Y698 323 aa13.07□□□□□ -0.32
DDX56-202ENST00000415758 C11orf98E9PRG8 122 aa13.06□□□□□ -0.32
DDX56-202ENST00000415758 UBDO15205 165 aa13.06□□□□□ -0.32
DDX56-202ENST00000415758 FMO6PO60774 539 aa13.06□□□□□ -0.32
DDX56-202ENST00000415758 SERPINI2O75830 405 aa13.06□□□□□ -0.32
DDX56-202ENST00000415758 UBOX5O94941 541 aa13.06□□□□□ -0.32
DDX56-202ENST00000415758 OR6A2O95222 327 aa13.06□□□□□ -0.32
DDX56-202ENST00000415758 PGA4P0DJD7 388 aa13.06□□□□□ -0.32
DDX56-202ENST00000415758 PGA3P0DJD8 388 aa13.06□□□□□ -0.32
DDX56-202ENST00000415758 KITP10721 976 aa13.06□□□□□ -0.32
DDX56-202ENST00000415758 MMP15P51511 669 aa13.06□□□□□ -0.32
DDX56-202ENST00000415758 HIST3H3Q16695 136 aa13.06□□□□□ -0.32
DDX56-202ENST00000415758 SLC36A2Q495M3 483 aa13.06□□□□□ -0.32
DDX56-202ENST00000415758 LRIF1Q5T3J3 769 aa13.06□□□□□ -0.32
DDX56-202ENST00000415758 GCNT6Q5T4J0 391 aa13.06□□□□□ -0.32
DDX56-202ENST00000415758 HHATQ5VTY9 493 aa13.06□□□□□ -0.32
DDX56-202ENST00000415758 ZNF613Q6PF04 617 aa13.06□□□□□ -0.32
DDX56-202ENST00000415758 SLC2A7Q6PXP3 512 aa13.06□□□□□ -0.32
DDX56-202ENST00000415758 DOK3Q7L591 496 aa13.06□□□□□ -0.32
DDX56-202ENST00000415758 SLC16A14Q7RTX9 510 aa13.06□□□□□ -0.32
DDX56-202ENST00000415758 MSRB3Q8IXL7 192 aa13.06□□□□□ -0.32
DDX56-202ENST00000415758 C10orf111Q8N326 155 aa13.06□□□□□ -0.32
DDX56-202ENST00000415758 GOLGA6L1Q8N7Z2 621 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms