RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 CES3Q6UWW8 571 aa2.42□□□□□ -2.02
HMGB1P11-201ENST00000413899 RFLNAQ6ZTI6 216 aa2.42□□□□□ -2.02
HMGB1P11-201ENST00000413899 NELFCDQ8IXH7 590 aa2.42□□□□□ -2.02
HMGB1P11-201ENST00000413899 C12orf56Q8IXR9 622 aa2.42□□□□□ -2.02
HMGB1P11-201ENST00000413899 ENTHD1Q8IYW4 607 aa2.42□□□□□ -2.02
HMGB1P11-201ENST00000413899 SLC38A6Q8IZM9 456 aa2.42□□□□□ -2.02
HMGB1P11-201ENST00000413899 MYOCDQ8IZQ8 938 aa2.42□□□□□ -2.02
HMGB1P11-201ENST00000413899 RDH10Q8IZV5 341 aa2.42□□□□□ -2.02
HMGB1P11-201ENST00000413899 C6orf223Q8N319 242 aa2.42□□□□□ -2.02
HMGB1P11-201ENST00000413899 SLC35F6Q8N357 371 aa2.42□□□□□ -2.02
HMGB1P11-201ENST00000413899 FAM71E2Q8N5Q1 922 aa2.42□□□□□ -2.02
HMGB1P11-201ENST00000413899 ATP6V0D2Q8N8Y2 350 aa2.42□□□□□ -2.02
HMGB1P11-201ENST00000413899 ANKFN1Q8N957 763 aa2.42□□□□□ -2.02
HMGB1P11-201ENST00000413899 RLN3Q8WXF3 142 aa2.42□□□□□ -2.02
HMGB1P11-201ENST00000413899 CTNNBL1Q8WYA6 563 aaPredicted RBP2.42□□□□□ -2.02
HMGB1P11-201ENST00000413899 RAPGEF5Q92565 580 aa2.42□□□□□ -2.02
HMGB1P11-201ENST00000413899 TBC1D31Q96DN5 1066 aa2.42□□□□□ -2.02
HMGB1P11-201ENST00000413899 SEC22AQ96IW7 307 aa2.42□□□□□ -2.02
HMGB1P11-201ENST00000413899 TGM7Q96PF1 710 aa2.42□□□□□ -2.02
HMGB1P11-201ENST00000413899 LXNQ9BS40 222 aa2.42□□□□□ -2.02
HMGB1P11-201ENST00000413899 SLC25A39Q9BZJ4 359 aaPredicted RBP2.42□□□□□ -2.02
HMGB1P11-201ENST00000413899 POLR1EQ9GZS1 481 aaKnown RBP2.42□□□□□ -2.02
HMGB1P11-201ENST00000413899 RAB33BQ9H082 229 aa2.42□□□□□ -2.02
HMGB1P11-201ENST00000413899 NT5C3AQ9H0P0 336 aa2.42□□□□□ -2.02
HMGB1P11-201ENST00000413899 C20orf85Q9H1P6 137 aa2.42□□□□□ -2.02
HMGB1P11-201ENST00000413899 FOLH1BQ9HBA9 442 aa2.42□□□□□ -2.02
HMGB1P11-201ENST00000413899 PLGRKTQ9HBL7 147 aa2.42□□□□□ -2.02
HMGB1P11-201ENST00000413899 PXMP2Q9NR77 195 aa2.42□□□□□ -2.02
HMGB1P11-201ENST00000413899 DMAC2Q9NW81 257 aa2.42□□□□□ -2.02
HMGB1P11-201ENST00000413899 SMPD3Q9NY59 655 aaPredicted RBP2.42□□□□□ -2.02
HMGB1P11-201ENST00000413899 PIPOXQ9P0Z9 390 aa2.42□□□□□ -2.02
HMGB1P11-201ENST00000413899 RNF14Q9UBS8 474 aa2.42□□□□□ -2.02
HMGB1P11-201ENST00000413899 V9GYY5 206 aaPredicted RBP2.42□□□□□ -2.02
HMGB1P11-201ENST00000413899 VWA8A3KMH1 1905 aa2.42□□□□□ -2.02
HMGB1P11-201ENST00000413899 ALPK3Q96L96 1907 aa2.42□□□□□ -2.02
HMGB1P11-201ENST00000413899 PTPRJQ12913 1337 aa2.42□□□□□ -2.02
HMGB1P11-201ENST00000413899 NYNRINQ9P2P1 1898 aaKnown RBP2.41□□□□□ -2.02
HMGB1P11-201ENST00000413899 LRP5LA4QPB2 252 aa2.41□□□□□ -2.02
HMGB1P11-201ENST00000413899 GJE1A6NN92 205 aa2.41□□□□□ -2.02
HMGB1P11-201ENST00000413899 IDSB3KWA1 339 aa2.41□□□□□ -2.02
HMGB1P11-201ENST00000413899 CHMP2AO43633 222 aa2.41□□□□□ -2.02
HMGB1P11-201ENST00000413899 FAM189A1O60320 539 aa2.41□□□□□ -2.02
HMGB1P11-201ENST00000413899 N4BP1O75113 896 aaKnown RBP2.41□□□□□ -2.02
HMGB1P11-201ENST00000413899 FLOT1O75955 427 aa2.41□□□□□ -2.02
HMGB1P11-201ENST00000413899 RBMY1CP0DJD4 496 aa2.41□□□□□ -2.02
HMGB1P11-201ENST00000413899 RPS2P15880 293 aaKnown RBP2.41□□□□□ -2.02
HMGB1P11-201ENST00000413899 RPA2P15927 270 aa2.41□□□□□ -2.02
HMGB1P11-201ENST00000413899 DESP17661 470 aa2.41□□□□□ -2.02
HMGB1P11-201ENST00000413899 RCC1P18754 421 aaPredicted RBP2.41□□□□□ -2.02
HMGB1P11-201ENST00000413899 NPR2P20594 1047 aa2.41□□□□□ -2.02
HMGB1P11-201ENST00000413899 HNRNPA2B1P22626 353 aaKnown RBP2.41□□□□□ -2.02
HMGB1P11-201ENST00000413899 HTR1FP30939 366 aa2.41□□□□□ -2.02
HMGB1P11-201ENST00000413899 CALCRP30988 508 aa2.41□□□□□ -2.02
HMGB1P11-201ENST00000413899 PPP1R2P41236 205 aa2.41□□□□□ -2.02
HMGB1P11-201ENST00000413899 KPNA2P52292 529 aaKnown RBP2.41□□□□□ -2.02
HMGB1P11-201ENST00000413899 DLX1P56177 255 aa2.41□□□□□ -2.02
HMGB1P11-201ENST00000413899 TNFRSF17Q02223 184 aa2.41□□□□□ -2.02
HMGB1P11-201ENST00000413899 EIF4EBP2Q13542 120 aaPredicted RBP2.41□□□□□ -2.02
HMGB1P11-201ENST00000413899 GRB7Q14451 532 aa2.41□□□□□ -2.02
HMGB1P11-201ENST00000413899 TPGS2Q68CL5 300 aa2.41□□□□□ -2.02
HMGB1P11-201ENST00000413899 SLC25A24Q6NUK1 477 aa2.41□□□□□ -2.02
HMGB1P11-201ENST00000413899 COX15Q7KZN9 410 aa2.41□□□□□ -2.02
HMGB1P11-201ENST00000413899 CCDC65Q8IXS2 484 aa2.41□□□□□ -2.02
HMGB1P11-201ENST00000413899 PNKDQ8N490 385 aa2.41□□□□□ -2.02
HMGB1P11-201ENST00000413899 FTMTQ8N4E7 242 aa2.41□□□□□ -2.02
HMGB1P11-201ENST00000413899 TEX9Q8N6V9 391 aa2.41□□□□□ -2.02
HMGB1P11-201ENST00000413899 FAM133AQ8N9E0 248 aa2.41□□□□□ -2.02
HMGB1P11-201ENST00000413899 THRSPQ92748 146 aa2.41□□□□□ -2.02
HMGB1P11-201ENST00000413899 RDH5Q92781 318 aa2.41□□□□□ -2.02
HMGB1P11-201ENST00000413899 RAB7BQ96AH8 199 aa2.41□□□□□ -2.02
HMGB1P11-201ENST00000413899 EFHD2Q96C19 240 aaPredicted RBP2.41□□□□□ -2.02
HMGB1P11-201ENST00000413899 RPUSD4Q96CM3 377 aaKnown RBP2.41□□□□□ -2.02
HMGB1P11-201ENST00000413899 TEKT3Q9BXF9 490 aa2.41□□□□□ -2.02
HMGB1P11-201ENST00000413899 RAB34Q9BZG1 259 aa2.41□□□□□ -2.02
HMGB1P11-201ENST00000413899 RMND5AQ9H871 391 aa2.41□□□□□ -2.02
HMGB1P11-201ENST00000413899 POPDC2Q9HBU9 364 aa2.41□□□□□ -2.02
HMGB1P11-201ENST00000413899 AGPAT3Q9NRZ7 376 aa2.41□□□□□ -2.02
HMGB1P11-201ENST00000413899 C6orf203Q9P0P8 240 aaPredicted RBP2.41□□□□□ -2.02
HMGB1P11-201ENST00000413899 MTRF1LQ9UGC7 380 aaKnown RBP2.41□□□□□ -2.02
HMGB1P11-201ENST00000413899 MRPS33Q9Y291 106 aaKnown RBP2.41□□□□□ -2.02
HMGB1P11-201ENST00000413899 CACNG2Q9Y698 323 aa2.41□□□□□ -2.02
HMGB1P11-201ENST00000413899 V9GY05 133 aa2.41□□□□□ -2.02
HMGB1P11-201ENST00000413899 PRRC2AP48634 2157 aaKnown RBP2.41□□□□□ -2.02
HMGB1P11-201ENST00000413899 CHD5Q8TDI0 1954 aa2.41□□□□□ -2.02
HMGB1P11-201ENST00000413899 NFASCO94856 1347 aa2.41□□□□□ -2.02
HMGB1P11-201ENST00000413899 A0A087X0T9 212 aa2.4□□□□□ -2.03
HMGB1P11-201ENST00000413899 GSTTP1A0A1W2PQM5 241 aa2.4□□□□□ -2.03
HMGB1P11-201ENST00000413899 NKX2-6A6NCS4 301 aa2.4□□□□□ -2.03
HMGB1P11-201ENST00000413899 ANKRD63C9JTQ0 380 aa2.4□□□□□ -2.03
HMGB1P11-201ENST00000413899 E9PBE3 544 aa2.4□□□□□ -2.03
HMGB1P11-201ENST00000413899 F8VZ95 297 aa2.4□□□□□ -2.03
HMGB1P11-201ENST00000413899 KIAA0754O94854 1291 aa2.4□□□□□ -2.03
HMGB1P11-201ENST00000413899 STAMBPO95630 424 aa2.4□□□□□ -2.03
HMGB1P11-201ENST00000413899 FAM228BP0C875 321 aa2.4□□□□□ -2.03
HMGB1P11-201ENST00000413899 LAP3P28838 519 aa2.4□□□□□ -2.03
HMGB1P11-201ENST00000413899 TAS2R19P59542 299 aa2.4□□□□□ -2.03
HMGB1P11-201ENST00000413899 PRPS1P60891 318 aa2.4□□□□□ -2.03
HMGB1P11-201ENST00000413899 GNG11P61952 73 aa2.4□□□□□ -2.03
HMGB1P11-201ENST00000413899 SELENOTP62341 195 aa2.4□□□□□ -2.03
HMGB1P11-201ENST00000413899 GTF2BQ00403 316 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms