RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 IGFN1Q86VF2 1251 aa16.37■□□□□ 0.21
TRIM56-202ENST00000412507 CDK20Q8IZL9 346 aa16.37■□□□□ 0.21
TRIM56-202ENST00000412507 NOXO1Q8NFA2 376 aa16.37■□□□□ 0.21
TRIM56-202ENST00000412507 MCHR2Q969V1 340 aa16.37■□□□□ 0.21
TRIM56-202ENST00000412507 PYURFQ96I23 114 aa16.37■□□□□ 0.21
TRIM56-202ENST00000412507 NSMCE2Q96MF7 247 aa16.37■□□□□ 0.21
TRIM56-202ENST00000412507 TNFRSF13CQ96RJ3 184 aa16.37■□□□□ 0.21
TRIM56-202ENST00000412507 MRPL13Q9BYD1 178 aaKnown RBP16.37■□□□□ 0.21
TRIM56-202ENST00000412507 TXNIPQ9H3M7 391 aa16.37■□□□□ 0.21
TRIM56-202ENST00000412507 ANKRD19PQ9H560 264 aa16.37■□□□□ 0.21
TRIM56-202ENST00000412507 ZNF224Q9NZL3 707 aa16.37■□□□□ 0.21
TRIM56-202ENST00000412507 GDF2Q9UK05 429 aaPredicted RBP16.37■□□□□ 0.21
TRIM56-202ENST00000412507 TRIM64A6NGJ6 449 aa16.36■□□□□ 0.21
TRIM56-202ENST00000412507 TRIM64BA6NI03 449 aa16.36■□□□□ 0.21
TRIM56-202ENST00000412507 FOSL1P15407 271 aa16.36■□□□□ 0.21
TRIM56-202ENST00000412507 SLC9A3P48764 834 aa16.36■□□□□ 0.21
TRIM56-202ENST00000412507 CTXN1P60606 82 aa16.36■□□□□ 0.21
TRIM56-202ENST00000412507 TOP3AQ13472 1001 aaPredicted RBP16.36■□□□□ 0.21
TRIM56-202ENST00000412507 FHL1Q13642 323 aa16.36■□□□□ 0.21
TRIM56-202ENST00000412507 FGD3Q5JSP0 725 aa16.36■□□□□ 0.21
TRIM56-202ENST00000412507 PODNL1Q6PEZ8 512 aa16.36■□□□□ 0.21
TRIM56-202ENST00000412507 PIWIL3Q7Z3Z3 882 aaKnown RBP16.36■□□□□ 0.21
TRIM56-202ENST00000412507 HDDC2Q7Z4H3 204 aa16.36■□□□□ 0.21
TRIM56-202ENST00000412507 OAFQ86UD1 273 aa16.36■□□□□ 0.21
TRIM56-202ENST00000412507 SKA3Q8IX90 412 aa16.36■□□□□ 0.21
TRIM56-202ENST00000412507 LRRC75AQ8NAA5 344 aa16.36■□□□□ 0.21
TRIM56-202ENST00000412507 OR13C2Q8NGS9 318 aa16.36■□□□□ 0.21
TRIM56-202ENST00000412507 HTRA1Q92743 480 aa16.36■□□□□ 0.21
TRIM56-202ENST00000412507 HDAC2Q92769 488 aaKnown RBP16.36■□□□□ 0.21
TRIM56-202ENST00000412507 C18orf12Q96KH6 178 aa16.36■□□□□ 0.21
TRIM56-202ENST00000412507 CACNG6Q9BXT2 260 aa16.36■□□□□ 0.21
TRIM56-202ENST00000412507 TMEM38BQ9NVV0 291 aa16.36■□□□□ 0.21
TRIM56-202ENST00000412507 YLPM1P49750 1951 aaKnown RBP16.36■□□□□ 0.21
TRIM56-202ENST00000412507 C2CD3Q4AC94 2353 aa16.35■□□□□ 0.21
TRIM56-202ENST00000412507 TRBV4-1A0A0J9YWV2 114 aa16.35■□□□□ 0.21
TRIM56-202ENST00000412507 A0A1W2PRQ8 180 aa16.35■□□□□ 0.21
TRIM56-202ENST00000412507 NPIPB13A6NJU9 1138 aa16.35■□□□□ 0.21
TRIM56-202ENST00000412507 CENPBD1B2RD01 187 aa16.35■□□□□ 0.21
TRIM56-202ENST00000412507 NPIPB4C9JG80 1138 aa16.35■□□□□ 0.21
TRIM56-202ENST00000412507 CDC42EP2O14613 210 aa16.35■□□□□ 0.21
TRIM56-202ENST00000412507 IGHV4-39P01824 125 aa16.35■□□□□ 0.21
TRIM56-202ENST00000412507 SEMG1P04279 462 aa16.35■□□□□ 0.21
TRIM56-202ENST00000412507 PATE4P0C8F1 98 aa16.35■□□□□ 0.21
TRIM56-202ENST00000412507 PTDSS1P48651 473 aaKnown RBP16.35■□□□□ 0.21
TRIM56-202ENST00000412507 DGCR6Q14129 220 aa16.35■□□□□ 0.21
TRIM56-202ENST00000412507 SPATS1Q496A3 300 aa16.35■□□□□ 0.21
TRIM56-202ENST00000412507 IQCCQ4KMZ1 466 aa16.35■□□□□ 0.21
TRIM56-202ENST00000412507 RINLQ6ZS11 566 aa16.35■□□□□ 0.21
TRIM56-202ENST00000412507 TMPRSS11FQ6ZWK6 438 aa16.35■□□□□ 0.21
TRIM56-202ENST00000412507 CIARTQ8N365 385 aaPredicted RBP16.35■□□□□ 0.21
TRIM56-202ENST00000412507 SLC22A24Q8N4F4 322 aa16.35■□□□□ 0.21
TRIM56-202ENST00000412507 OR52J3Q8NH60 311 aa16.35■□□□□ 0.21
TRIM56-202ENST00000412507 FGFBP3Q8TAT2 258 aa16.35■□□□□ 0.21
TRIM56-202ENST00000412507 NANOS1Q8WY41 292 aaKnown RBP16.35■□□□□ 0.21
TRIM56-202ENST00000412507 MS4A3Q96HJ5 214 aa16.35■□□□□ 0.21
TRIM56-202ENST00000412507 FAM46AQ96IP4 442 aaKnown RBP16.35■□□□□ 0.21
TRIM56-202ENST00000412507 ZNF75AQ96N20 296 aa16.35■□□□□ 0.21
TRIM56-202ENST00000412507 SEPHS2Q99611 448 aa16.35■□□□□ 0.21
TRIM56-202ENST00000412507 GSX1Q9H4S2 264 aaPredicted RBP16.35■□□□□ 0.21
TRIM56-202ENST00000412507 STX18Q9P2W9 335 aaKnown RBP16.35■□□□□ 0.21
TRIM56-202ENST00000412507 ZNF346Q9UL40 294 aaKnown RBP16.35■□□□□ 0.21
TRIM56-202ENST00000412507 TLN2Q9Y4G6 2542 aa16.35■□□□□ 0.21
TRIM56-202ENST00000412507 IGHV2OR16-5A0A0B4J2B6 119 aa16.34■□□□□ 0.21
TRIM56-202ENST00000412507 H7C1Q1 480 aa16.34■□□□□ 0.21
TRIM56-202ENST00000412507 SLC2A10O95528 541 aa16.34■□□□□ 0.21
TRIM56-202ENST00000412507 OR8G3PP0DMU2 310 aa16.34■□□□□ 0.21
TRIM56-202ENST00000412507 T-ENOLP0DO92 83 aa16.34■□□□□ 0.21
TRIM56-202ENST00000412507 ITGA2P17301 1181 aa16.34■□□□□ 0.21
TRIM56-202ENST00000412507 CALB2P22676 271 aa16.34■□□□□ 0.21
TRIM56-202ENST00000412507 ACVR1BP36896 505 aa16.34■□□□□ 0.21
TRIM56-202ENST00000412507 GIPRP48546 466 aa16.34■□□□□ 0.21
TRIM56-202ENST00000412507 ZNF84P51523 738 aa16.34■□□□□ 0.21
TRIM56-202ENST00000412507 RPL27P61353 136 aaKnown RBP16.34■□□□□ 0.21
TRIM56-202ENST00000412507 RAB1AP62820 205 aa16.34■□□□□ 0.21
TRIM56-202ENST00000412507 HGFACQ04756 655 aa16.34■□□□□ 0.21
TRIM56-202ENST00000412507 TAF11Q15544 211 aa16.34■□□□□ 0.21
TRIM56-202ENST00000412507 ANKDD1AQ495B1 522 aa16.34■□□□□ 0.21
TRIM56-202ENST00000412507 VHLLQ6RSH7 139 aa16.34■□□□□ 0.21
TRIM56-202ENST00000412507 CYP2R1Q6VVX0 501 aa16.34■□□□□ 0.21
TRIM56-202ENST00000412507 FBXO17Q96EF6 278 aa16.34■□□□□ 0.21
TRIM56-202ENST00000412507 TSPAN32Q96QS1 320 aa16.34■□□□□ 0.21
TRIM56-202ENST00000412507 SMR3AQ99954 134 aa16.34■□□□□ 0.21
TRIM56-202ENST00000412507 SH3GL3Q99963 347 aa16.34■□□□□ 0.21
TRIM56-202ENST00000412507 BDH2Q9BUT1 245 aa16.34■□□□□ 0.21
TRIM56-202ENST00000412507 CA10Q9NS85 328 aa16.34■□□□□ 0.21
TRIM56-202ENST00000412507 TMEM5Q9Y2B1 443 aa16.34■□□□□ 0.21
TRIM56-202ENST00000412507 UBL3O95164 117 aa16.33■□□□□ 0.2
TRIM56-202ENST00000412507 RAB36O95755 333 aa16.33■□□□□ 0.2
TRIM56-202ENST00000412507 IGHMP01871 453 aa16.33■□□□□ 0.2
TRIM56-202ENST00000412507 INHBBP09529 407 aa16.33■□□□□ 0.2
TRIM56-202ENST00000412507 ZNF14P17017 642 aaPredicted RBP16.33■□□□□ 0.2
TRIM56-202ENST00000412507 ZNF133P52736 654 aaPredicted RBP16.33■□□□□ 0.2
TRIM56-202ENST00000412507 FMODQ06828 376 aa16.33■□□□□ 0.2
TRIM56-202ENST00000412507 CD47Q08722 323 aa16.33■□□□□ 0.2
TRIM56-202ENST00000412507 SEC23BQ15437 767 aa16.33■□□□□ 0.2
TRIM56-202ENST00000412507 CLEC12BQ2HXU8 276 aa16.33■□□□□ 0.2
TRIM56-202ENST00000412507 ZBED5Q49AG3 693 aa16.33■□□□□ 0.2
TRIM56-202ENST00000412507 C10orf128Q5T292 105 aa16.33■□□□□ 0.2
TRIM56-202ENST00000412507 OR4F15Q8NGB8 312 aa16.33■□□□□ 0.2
TRIM56-202ENST00000412507 OR4K5Q8NGD3 323 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms