RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 CSMD2Q7Z408 3487 aa19.54■□□□□ 0.72
PTCD3-203ENST00000409783 IGKV1D-43A0A0B4J1Z2 117 aa19.54■□□□□ 0.72
PTCD3-203ENST00000409783 ZNF503-AS2A6NEH8 195 aa19.54■□□□□ 0.72
PTCD3-203ENST00000409783 PLAUP00749 431 aa19.54■□□□□ 0.72
PTCD3-203ENST00000409783 NR1H2P55055 460 aa19.54■□□□□ 0.72
PTCD3-203ENST00000409783 MYBPC1Q00872 1141 aa19.54■□□□□ 0.72
PTCD3-203ENST00000409783 BSPH1Q075Z2 132 aa19.54■□□□□ 0.72
PTCD3-203ENST00000409783 RFX4Q33E94 735 aa19.54■□□□□ 0.72
PTCD3-203ENST00000409783 MESTQ5EB52 335 aa19.54■□□□□ 0.72
PTCD3-203ENST00000409783 C10orf128Q5T292 105 aa19.54■□□□□ 0.72
PTCD3-203ENST00000409783 FBXW10Q5XX13 1052 aa19.54■□□□□ 0.72
PTCD3-203ENST00000409783 ZNF620Q6ZNG0 422 aa19.54■□□□□ 0.72
PTCD3-203ENST00000409783 CLDN22Q8N7P3 220 aa19.54■□□□□ 0.72
PTCD3-203ENST00000409783 FANK1Q8TC84 345 aa19.54■□□□□ 0.72
PTCD3-203ENST00000409783 FOXB1Q99853 325 aa19.54■□□□□ 0.72
PTCD3-203ENST00000409783 ALG12Q9BV10 488 aa19.54■□□□□ 0.72
PTCD3-203ENST00000409783 LIME1Q9H400 295 aa19.54■□□□□ 0.72
PTCD3-203ENST00000409783 YY1AP1Q9H869 796 aa19.54■□□□□ 0.72
PTCD3-203ENST00000409783 NTN4Q9HB63 628 aa19.54■□□□□ 0.72
PTCD3-203ENST00000409783 POFUT2Q9Y2G5 429 aa19.54■□□□□ 0.72
PTCD3-203ENST00000409783 A6NIZ1 184 aa19.53■□□□□ 0.72
PTCD3-203ENST00000409783 HOXC12P31275 282 aa19.53■□□□□ 0.72
PTCD3-203ENST00000409783 ZNF83P51522 516 aa19.53■□□□□ 0.72
PTCD3-203ENST00000409783 RAP1BP61224 184 aa19.53■□□□□ 0.72
PTCD3-203ENST00000409783 RAP1AP62834 184 aa19.53■□□□□ 0.72
PTCD3-203ENST00000409783 TUBA1BP68363 451 aa19.53■□□□□ 0.72
PTCD3-203ENST00000409783 TUBA4AP68366 448 aa19.53■□□□□ 0.72
PTCD3-203ENST00000409783 FMODQ06828 376 aa19.53■□□□□ 0.72
PTCD3-203ENST00000409783 SLC25A47Q6Q0C1 308 aa19.53■□□□□ 0.72
PTCD3-203ENST00000409783 DPY19L2P2Q6ZN68 376 aa19.53■□□□□ 0.72
PTCD3-203ENST00000409783 TUBA1AQ71U36 451 aa19.53■□□□□ 0.72
PTCD3-203ENST00000409783 AQP11Q8NBQ7 271 aa19.53■□□□□ 0.72
PTCD3-203ENST00000409783 C1QTNF6Q9BXI9 259 aa19.53■□□□□ 0.72
PTCD3-203ENST00000409783 DGCR6LQ9BY27 220 aa19.53■□□□□ 0.72
PTCD3-203ENST00000409783 ESRP2Q9H6T0 727 aaKnown RBP19.53■□□□□ 0.72
PTCD3-203ENST00000409783 ZNF224Q9NZL3 707 aa19.53■□□□□ 0.72
PTCD3-203ENST00000409783 DNAJB9Q9UBS3 223 aa19.53■□□□□ 0.72
PTCD3-203ENST00000409783 HEATR1Q9H583 2144 aaKnown RBP19.52■□□□□ 0.72
PTCD3-203ENST00000409783 TIPRLO75663 272 aa19.52■□□□□ 0.72
PTCD3-203ENST00000409783 CIB2O75838 187 aa19.52■□□□□ 0.72
PTCD3-203ENST00000409783 SLC2A10O95528 541 aa19.52■□□□□ 0.72
PTCD3-203ENST00000409783 TXNDC12O95881 172 aa19.52■□□□□ 0.72
PTCD3-203ENST00000409783 WNT11O96014 354 aa19.52■□□□□ 0.72
PTCD3-203ENST00000409783 APEHP13798 732 aaKnown RBP19.52■□□□□ 0.72
PTCD3-203ENST00000409783 B4GALT1P15291 398 aa19.52■□□□□ 0.72
PTCD3-203ENST00000409783 SDHAP31040 664 aa19.52■□□□□ 0.72
PTCD3-203ENST00000409783 GPR139Q6DWJ6 353 aa19.52■□□□□ 0.72
PTCD3-203ENST00000409783 KLHL24Q6TFL4 600 aa19.52■□□□□ 0.72
PTCD3-203ENST00000409783 ZNF813Q6ZN06 617 aa19.52■□□□□ 0.72
PTCD3-203ENST00000409783 OR10G2Q8NGC3 310 aa19.52■□□□□ 0.72
PTCD3-203ENST00000409783 LILRB1Q8NHL6 650 aaPredicted RBP19.52■□□□□ 0.72
PTCD3-203ENST00000409783 SAMD8Q96LT4 415 aa19.52■□□□□ 0.72
PTCD3-203ENST00000409783 ZNF570Q96NI8 536 aa19.52■□□□□ 0.72
PTCD3-203ENST00000409783 NDEL1Q9GZM8 345 aa19.52■□□□□ 0.72
PTCD3-203ENST00000409783 SMURF2Q9HAU4 748 aa19.52■□□□□ 0.72
PTCD3-203ENST00000409783 ARMC1Q9NVT9 282 aa19.52■□□□□ 0.72
PTCD3-203ENST00000409783 TMEM38BQ9NVV0 291 aa19.52■□□□□ 0.72
PTCD3-203ENST00000409783 B3GNT2Q9NY97 397 aa19.52■□□□□ 0.72
PTCD3-203ENST00000409783 CRNNQ9UBG3 495 aaPredicted RBP19.52■□□□□ 0.72
PTCD3-203ENST00000409783 GRHPRQ9UBQ7 328 aa19.52■□□□□ 0.72
PTCD3-203ENST00000409783 UGT2A1Q9Y4X1 527 aa19.52■□□□□ 0.72
PTCD3-203ENST00000409783 IER3IP1Q9Y5U9 82 aa19.52■□□□□ 0.72
PTCD3-203ENST00000409783 MAGED1Q9Y5V3 778 aaPredicted RBP19.52■□□□□ 0.72
PTCD3-203ENST00000409783 CSMD1Q96PZ7 3565 aa19.52■□□□□ 0.71
PTCD3-203ENST00000409783 MAST4O15021 2626 aa19.51■□□□□ 0.71
PTCD3-203ENST00000409783 ANKRD17O75179 2603 aaKnown RBP19.51■□□□□ 0.71
PTCD3-203ENST00000409783 TEX13CA0A0J9YWL9 993 aa19.51■□□□□ 0.71
PTCD3-203ENST00000409783 ARRDC5A6NEK1 342 aa19.51■□□□□ 0.71
PTCD3-203ENST00000409783 TP53P04637 393 aaPredicted RBP19.51■□□□□ 0.71
PTCD3-203ENST00000409783 UBE2NP61088 152 aaKnown RBP19.51■□□□□ 0.71
PTCD3-203ENST00000409783 CD47Q08722 323 aa19.51■□□□□ 0.71
PTCD3-203ENST00000409783 ZNF704Q6ZNC4 412 aaPredicted RBP19.51■□□□□ 0.71
PTCD3-203ENST00000409783 RASSF6Q6ZTQ3 369 aa19.51■□□□□ 0.71
PTCD3-203ENST00000409783 GIPC3Q8TF64 312 aa19.51■□□□□ 0.71
PTCD3-203ENST00000409783 RASD2Q96D21 266 aa19.51■□□□□ 0.71
PTCD3-203ENST00000409783 EGLN3Q9H6Z9 239 aa19.51■□□□□ 0.71
PTCD3-203ENST00000409783 IL20Q9NYY1 176 aa19.51■□□□□ 0.71
PTCD3-203ENST00000409783 MGAT4BQ9UQ53 548 aa19.51■□□□□ 0.71
PTCD3-203ENST00000409783 CDH10Q9Y6N8 788 aa19.51■□□□□ 0.71
PTCD3-203ENST00000409783 TEX15Q9BXT5 2789 aa19.51■□□□□ 0.71
PTCD3-203ENST00000409783 H7C1C5 153 aa19.5■□□□□ 0.71
PTCD3-203ENST00000409783 GNGT2O14610 69 aa19.5■□□□□ 0.71
PTCD3-203ENST00000409783 ARPC3O15145 178 aa19.5■□□□□ 0.71
PTCD3-203ENST00000409783 ARHGEF9O43307 516 aa19.5■□□□□ 0.71
PTCD3-203ENST00000409783 PPP1R3DO95685 299 aa19.5■□□□□ 0.71
PTCD3-203ENST00000409783 CD40P25942 277 aa19.5■□□□□ 0.71
PTCD3-203ENST00000409783 SLC6A6P31641 620 aa19.5■□□□□ 0.71
PTCD3-203ENST00000409783 LCN6P62502 163 aa19.5■□□□□ 0.71
PTCD3-203ENST00000409783 KRR1Q13601 381 aaKnown RBP19.5■□□□□ 0.71
PTCD3-203ENST00000409783 THEM4Q5T1C6 240 aa19.5■□□□□ 0.71
PTCD3-203ENST00000409783 CD300LDQ6UXZ3 194 aa19.5■□□□□ 0.71
PTCD3-203ENST00000409783 PTCHD4Q6ZW05 846 aa19.5■□□□□ 0.71
PTCD3-203ENST00000409783 YTHDF3Q7Z739 585 aaKnown RBP19.5■□□□□ 0.71
PTCD3-203ENST00000409783 CCDC36Q8IYA8 594 aa19.5■□□□□ 0.71
PTCD3-203ENST00000409783 HS3ST5Q8IZT8 346 aa19.5■□□□□ 0.71
PTCD3-203ENST00000409783 FAM169BQ8N8A8 192 aa19.5■□□□□ 0.71
PTCD3-203ENST00000409783 OR8D4Q8NGM9 314 aa19.5■□□□□ 0.71
PTCD3-203ENST00000409783 HTRA1Q92743 480 aa19.5■□□□□ 0.71
PTCD3-203ENST00000409783 GTPBP3Q969Y2 492 aaKnown RBP19.5■□□□□ 0.71
PTCD3-203ENST00000409783 FEVQ99581 238 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms