RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 TGFBR2P37173 567 aa11.1□□□□□ -0.63
CHMP3-204ENST00000409727 RGS6P49758 472 aa11.1□□□□□ -0.63
CHMP3-204ENST00000409727 AGFG1P52594 562 aaKnown RBP11.1□□□□□ -0.63
CHMP3-204ENST00000409727 ZNF85Q03923 595 aa11.1□□□□□ -0.63
CHMP3-204ENST00000409727 MEP1BQ16820 701 aa11.1□□□□□ -0.63
CHMP3-204ENST00000409727 NHLRC1Q6VVB1 395 aa11.1□□□□□ -0.63
CHMP3-204ENST00000409727 P2RY8Q86VZ1 359 aa11.1□□□□□ -0.63
CHMP3-204ENST00000409727 OR9K2Q8NGE7 335 aa11.1□□□□□ -0.63
CHMP3-204ENST00000409727 ZNF385AQ96PM9 386 aaKnown RBP11.1□□□□□ -0.63
CHMP3-204ENST00000409727 YIPF3Q9GZM5 350 aa11.1□□□□□ -0.63
CHMP3-204ENST00000409727 SPTBN4Q9H254 2564 aa11.1□□□□□ -0.63
CHMP3-204ENST00000409727 LUZP4Q9P127 313 aa11.1□□□□□ -0.63
CHMP3-204ENST00000409727 COPS3Q9UNS2 423 aa11.1□□□□□ -0.63
CHMP3-204ENST00000409727 COA3Q9Y2R0 106 aaPredicted RBP11.1□□□□□ -0.63
CHMP3-204ENST00000409727 NPIPB13A6NJU9 1138 aa11.09□□□□□ -0.63
CHMP3-204ENST00000409727 NPIPB4C9JG80 1138 aa11.09□□□□□ -0.63
CHMP3-204ENST00000409727 J3QLW9 94 aa11.09□□□□□ -0.63
CHMP3-204ENST00000409727 PSMD9O00233 223 aa11.09□□□□□ -0.63
CHMP3-204ENST00000409727 ZNHIT1O43257 154 aa11.09□□□□□ -0.63
CHMP3-204ENST00000409727 MPZL1O95297 269 aa11.09□□□□□ -0.63
CHMP3-204ENST00000409727 IGHG1P01857 330 aa11.09□□□□□ -0.63
CHMP3-204ENST00000409727 ZNF708P17019 499 aa11.09□□□□□ -0.63
CHMP3-204ENST00000409727 ZNF19P17023 458 aa11.09□□□□□ -0.63
CHMP3-204ENST00000409727 ACTC1P68032 377 aa11.09□□□□□ -0.63
CHMP3-204ENST00000409727 ACTA1P68133 377 aa11.09□□□□□ -0.63
CHMP3-204ENST00000409727 GALEQ14376 348 aa11.09□□□□□ -0.63
CHMP3-204ENST00000409727 SLC17A1Q14916 467 aa11.09□□□□□ -0.63
CHMP3-204ENST00000409727 ZNF169Q14929 603 aaPredicted RBP11.09□□□□□ -0.63
CHMP3-204ENST00000409727 ZNF239Q16600 458 aaKnown RBP11.09□□□□□ -0.63
CHMP3-204ENST00000409727 PDSS1Q5T2R2 415 aa11.09□□□□□ -0.63
CHMP3-204ENST00000409727 LIPKQ5VXJ0 399 aa11.09□□□□□ -0.63
CHMP3-204ENST00000409727 FAM205BPQ63HN1 556 aa11.09□□□□□ -0.63
CHMP3-204ENST00000409727 ZNF322Q6U7Q0 402 aaPredicted RBP11.09□□□□□ -0.63
CHMP3-204ENST00000409727 TMPRSS11AQ6ZMR5 421 aa11.09□□□□□ -0.63
CHMP3-204ENST00000409727 SLC16A12Q6ZSM3 486 aa11.09□□□□□ -0.63
CHMP3-204ENST00000409727 CREB3L2Q70SY1 520 aa11.09□□□□□ -0.63
CHMP3-204ENST00000409727 ZBTB46Q86UZ6 589 aa11.09□□□□□ -0.63
CHMP3-204ENST00000409727 KLBQ86Z14 1044 aa11.09□□□□□ -0.63
CHMP3-204ENST00000409727 MEIOBQ8N635 442 aa11.09□□□□□ -0.63
CHMP3-204ENST00000409727 OR6N2Q8NGY6 317 aa11.09□□□□□ -0.63
CHMP3-204ENST00000409727 NEIL3Q8TAT5 605 aa11.09□□□□□ -0.63
CHMP3-204ENST00000409727 RPL3LQ92901 407 aaKnown RBP11.09□□□□□ -0.63
CHMP3-204ENST00000409727 EXTL1Q92935 676 aa11.09□□□□□ -0.63
CHMP3-204ENST00000409727 SLC25A44Q96H78 314 aaPredicted RBP11.09□□□□□ -0.63
CHMP3-204ENST00000409727 RACGAP1Q9H0H5 632 aa11.09□□□□□ -0.63
CHMP3-204ENST00000409727 ACKR4Q9NPB9 350 aa11.09□□□□□ -0.63
CHMP3-204ENST00000409727 TIGARQ9NQ88 270 aa11.09□□□□□ -0.63
CHMP3-204ENST00000409727 QPCTLQ9NXS2 382 aa11.09□□□□□ -0.63
CHMP3-204ENST00000409727 ENPP5Q9UJA9 477 aa11.09□□□□□ -0.63
CHMP3-204ENST00000409727 ING1Q9UK53 422 aaPredicted RBP11.09□□□□□ -0.63
CHMP3-204ENST00000409727 FKBP7Q9Y680 259 aa11.09□□□□□ -0.63
CHMP3-204ENST00000409727 CEP295Q9C0D2 2601 aa11.09□□□□□ -0.63
CHMP3-204ENST00000409727 IGLV1-36A0A0B4J1U3 117 aa11.08□□□□□ -0.64
CHMP3-204ENST00000409727 LOC100506127A0A0U1RQW1 187 aa11.08□□□□□ -0.64
CHMP3-204ENST00000409727 LRRTM2O43300 516 aa11.08□□□□□ -0.64
CHMP3-204ENST00000409727 WISP2O76076 250 aa11.08□□□□□ -0.64
CHMP3-204ENST00000409727 VAMP5O95183 116 aa11.08□□□□□ -0.64
CHMP3-204ENST00000409727 ATE1O95260 518 aa11.08□□□□□ -0.64
CHMP3-204ENST00000409727 LALBAP00709 142 aa11.08□□□□□ -0.64
CHMP3-204ENST00000409727 SCG5P05408 212 aa11.08□□□□□ -0.64
CHMP3-204ENST00000409727 OR2T7P0C7T2 308 aa11.08□□□□□ -0.64
CHMP3-204ENST00000409727 PGA4P0DJD7 388 aa11.08□□□□□ -0.64
CHMP3-204ENST00000409727 PGA3P0DJD8 388 aa11.08□□□□□ -0.64
CHMP3-204ENST00000409727 GADD45AP24522 165 aa11.08□□□□□ -0.64
CHMP3-204ENST00000409727 CRABP1P29762 137 aa11.08□□□□□ -0.64
CHMP3-204ENST00000409727 TMBIM6P55061 237 aa11.08□□□□□ -0.64
CHMP3-204ENST00000409727 OR12D2P58182 307 aa11.08□□□□□ -0.64
CHMP3-204ENST00000409727 RPS3AP61247 264 aaKnown RBP11.08□□□□□ -0.64
CHMP3-204ENST00000409727 SSX1Q16384 188 aa11.08□□□□□ -0.64
CHMP3-204ENST00000409727 TP53I3Q53FA7 332 aa11.08□□□□□ -0.64
CHMP3-204ENST00000409727 LRRC69Q6ZNQ3 347 aa11.08□□□□□ -0.64
CHMP3-204ENST00000409727 ANKRD13BQ86YJ7 626 aa11.08□□□□□ -0.64
CHMP3-204ENST00000409727 TIGD4Q8IY51 512 aa11.08□□□□□ -0.64
CHMP3-204ENST00000409727 NOXO1Q8NFA2 376 aa11.08□□□□□ -0.64
CHMP3-204ENST00000409727 OR2T27Q8NH04 317 aa11.08□□□□□ -0.64
CHMP3-204ENST00000409727 OR6X1Q8NH79 312 aa11.08□□□□□ -0.64
CHMP3-204ENST00000409727 ZNF420Q8TAQ5 688 aaPredicted RBP11.08□□□□□ -0.64
CHMP3-204ENST00000409727 ABHD3Q8WU67 409 aa11.08□□□□□ -0.64
CHMP3-204ENST00000409727 CPNE4Q96A23 557 aaPredicted RBP11.08□□□□□ -0.64
CHMP3-204ENST00000409727 C4orf36Q96KX1 117 aa11.08□□□□□ -0.64
CHMP3-204ENST00000409727 SNX18Q96RF0 628 aa11.08□□□□□ -0.64
CHMP3-204ENST00000409727 INTS14Q96SY0 518 aa11.08□□□□□ -0.64
CHMP3-204ENST00000409727 TIMP4Q99727 224 aa11.08□□□□□ -0.64
CHMP3-204ENST00000409727 JAM3Q9BX67 310 aa11.08□□□□□ -0.64
CHMP3-204ENST00000409727 ZDHHC11Q9H8X9 412 aa11.08□□□□□ -0.64
CHMP3-204ENST00000409727 SPRR3Q9UBC9 169 aa11.08□□□□□ -0.64
CHMP3-204ENST00000409727 PCDHGB7Q9Y5F8 929 aa11.08□□□□□ -0.64
CHMP3-204ENST00000409727 PCDHGA9Q9Y5G4 932 aaKnown RBP11.08□□□□□ -0.64
CHMP3-204ENST00000409727 ACACAQ13085 2346 aa11.08□□□□□ -0.64
CHMP3-204ENST00000409727 URB1O60287 2271 aaKnown RBP11.08□□□□□ -0.64
CHMP3-204ENST00000409727 LOC102725191A0A1B0GVB3 256 aa11.08□□□□□ -0.64
CHMP3-204ENST00000409727 MKRN2OSH3BPM6 223 aa11.08□□□□□ -0.64
CHMP3-204ENST00000409727 K7ENP7 123 aa11.08□□□□□ -0.64
CHMP3-204ENST00000409727 CCRL2O00421 344 aa11.08□□□□□ -0.64
CHMP3-204ENST00000409727 DNPH1O43598 174 aa11.08□□□□□ -0.64
CHMP3-204ENST00000409727 ADRB1P08588 477 aa11.08□□□□□ -0.64
CHMP3-204ENST00000409727 PSKH1P11801 424 aa11.08□□□□□ -0.64
CHMP3-204ENST00000409727 TGFBR1P36897 503 aa11.08□□□□□ -0.64
CHMP3-204ENST00000409727 VBP1P61758 197 aa11.08□□□□□ -0.64
CHMP3-204ENST00000409727 ADAM8P78325 824 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms