RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 CTRB1P17538 263 aa17.98■□□□□ 0.47
CCDC47-202ENST00000403162 CFPP27918 469 aa17.98■□□□□ 0.47
CCDC47-202ENST00000403162 GRK6P43250 576 aa17.98■□□□□ 0.47
CCDC47-202ENST00000403162 CTRB2Q6GPI1 263 aa17.98■□□□□ 0.47
CCDC47-202ENST00000403162 ZNF440Q8IYI8 595 aa17.98■□□□□ 0.47
CCDC47-202ENST00000403162 SLC22A18ASQ8N1D0 253 aa17.98■□□□□ 0.47
CCDC47-202ENST00000403162 LRRC75AQ8NAA5 344 aa17.98■□□□□ 0.47
CCDC47-202ENST00000403162 OR5M1Q8NGP8 315 aa17.98■□□□□ 0.47
CCDC47-202ENST00000403162 KLHDC7BQ96G42 594 aa17.98■□□□□ 0.47
CCDC47-202ENST00000403162 DPYSL5Q9BPU6 564 aa17.98■□□□□ 0.47
CCDC47-202ENST00000403162 GINS4Q9BRT9 223 aa17.98■□□□□ 0.47
CCDC47-202ENST00000403162 SHARPINQ9H0F6 387 aa17.98■□□□□ 0.47
CCDC47-202ENST00000403162 ABCA7Q8IZY2 2146 aa17.98■□□□□ 0.47
CCDC47-202ENST00000403162 FAM221BA6H8Z2 402 aa17.98■□□□□ 0.47
CCDC47-202ENST00000403162 C4orf47A7E2U8 309 aa17.98■□□□□ 0.47
CCDC47-202ENST00000403162 HRKO00198 91 aa17.98■□□□□ 0.47
CCDC47-202ENST00000403162 SDHAP31040 664 aa17.98■□□□□ 0.47
CCDC47-202ENST00000403162 AQP2P41181 271 aa17.98■□□□□ 0.47
CCDC47-202ENST00000403162 H2BFSP57053 126 aa17.98■□□□□ 0.47
CCDC47-202ENST00000403162 SRSF5Q13243 272 aaKnown RBP17.98■□□□□ 0.47
CCDC47-202ENST00000403162 OR6N1Q8NGY5 312 aa17.98■□□□□ 0.47
CCDC47-202ENST00000403162 TSSK2Q96PF2 358 aa17.98■□□□□ 0.47
CCDC47-202ENST00000403162 STARD5Q9NSY2 213 aa17.98■□□□□ 0.47
CCDC47-202ENST00000403162 LRIT1Q9P2V4 623 aa17.98■□□□□ 0.47
CCDC47-202ENST00000403162 PFDN2Q9UHV9 154 aa17.98■□□□□ 0.47
CCDC47-202ENST00000403162 ZNF346Q9UL40 294 aaKnown RBP17.98■□□□□ 0.47
CCDC47-202ENST00000403162 ARHGEF17Q96PE2 2063 aaPredicted RBP17.98■□□□□ 0.47
CCDC47-202ENST00000403162 TRAV8-7A0A075B6U6 113 aa17.97■□□□□ 0.47
CCDC47-202ENST00000403162 OR4C45A6NMZ5 311 aa17.97■□□□□ 0.47
CCDC47-202ENST00000403162 BLOC1S5-TXNDC5H3BN57 136 aa17.97■□□□□ 0.47
CCDC47-202ENST00000403162 TNFRSF10CO14798 259 aa17.97■□□□□ 0.47
CCDC47-202ENST00000403162 ARPC5O15511 151 aa17.97■□□□□ 0.47
CCDC47-202ENST00000403162 PLA2G7Q13093 441 aa17.97■□□□□ 0.47
CCDC47-202ENST00000403162 MPPED2Q15777 294 aa17.97■□□□□ 0.47
CCDC47-202ENST00000403162 ALG11Q2TAA5 492 aa17.97■□□□□ 0.47
CCDC47-202ENST00000403162 TUSC1Q2TAM9 212 aa17.97■□□□□ 0.47
CCDC47-202ENST00000403162 ANKRD16Q6P6B7 361 aa17.97■□□□□ 0.47
CCDC47-202ENST00000403162 SDR16C5Q8N3Y7 309 aa17.97■□□□□ 0.47
CCDC47-202ENST00000403162 LSM14AQ8ND56 463 aaKnown RBP17.97■□□□□ 0.47
CCDC47-202ENST00000403162 OR2AK2Q8NG84 335 aa17.97■□□□□ 0.47
CCDC47-202ENST00000403162 OR9A4Q8NGU2 314 aa17.97■□□□□ 0.47
CCDC47-202ENST00000403162 OR4C3Q8NH37 302 aa17.97■□□□□ 0.47
CCDC47-202ENST00000403162 ZDHHC1Q8WTX9 485 aa17.97■□□□□ 0.47
CCDC47-202ENST00000403162 CCDC3Q9BQI4 270 aa17.97■□□□□ 0.47
CCDC47-202ENST00000403162 DUSP15Q9H1R2 295 aaPredicted RBP17.97■□□□□ 0.47
CCDC47-202ENST00000403162 MED11Q9P086 117 aa17.97■□□□□ 0.47
CCDC47-202ENST00000403162 GGT3PA6NGU5 568 aa17.97■□□□□ 0.47
CCDC47-202ENST00000403162 F5H5P2 479 aa17.97■□□□□ 0.47
CCDC47-202ENST00000403162 TGFBR3LH3BV60 316 aa17.97■□□□□ 0.47
CCDC47-202ENST00000403162 PRAMEF2O60811 474 aa17.97■□□□□ 0.47
CCDC47-202ENST00000403162 TXNDC12O95881 172 aa17.97■□□□□ 0.47
CCDC47-202ENST00000403162 CT45A8P0DMV1 189 aa17.97■□□□□ 0.47
CCDC47-202ENST00000403162 CT45A9P0DMV2 189 aa17.97■□□□□ 0.47
CCDC47-202ENST00000403162 NAGAP17050 411 aa17.97■□□□□ 0.47
CCDC47-202ENST00000403162 ZNF74Q16587 644 aa17.97■□□□□ 0.47
CCDC47-202ENST00000403162 CT45A2Q5DJT8 189 aa17.97■□□□□ 0.47
CCDC47-202ENST00000403162 ALKAL2Q6UX46 152 aa17.97■□□□□ 0.47
CCDC47-202ENST00000403162 OR6M1Q8NGM8 313 aa17.97■□□□□ 0.47
CCDC47-202ENST00000403162 OR2G2Q8NGZ5 317 aa17.97■□□□□ 0.47
CCDC47-202ENST00000403162 FAM174AQ8TBP5 190 aa17.97■□□□□ 0.47
CCDC47-202ENST00000403162 MNTQ99583 582 aa17.97■□□□□ 0.47
CCDC47-202ENST00000403162 SEMA4CQ9C0C4 833 aa17.97■□□□□ 0.47
CCDC47-202ENST00000403162 COMMD4Q9H0A8 199 aa17.97■□□□□ 0.47
CCDC47-202ENST00000403162 ZDBF2Q9HCK1 2354 aa17.97■□□□□ 0.47
CCDC47-202ENST00000403162 ELOA3DA6NLF2 546 aaPredicted RBP17.96■□□□□ 0.47
CCDC47-202ENST00000403162 TMEM212A6NML5 194 aa17.96■□□□□ 0.47
CCDC47-202ENST00000403162 MAS1P04201 325 aa17.96■□□□□ 0.47
CCDC47-202ENST00000403162 PNMTP11086 282 aa17.96■□□□□ 0.47
CCDC47-202ENST00000403162 ATF4P18848 351 aaPredicted RBP17.96■□□□□ 0.47
CCDC47-202ENST00000403162 CD38P28907 300 aa17.96■□□□□ 0.47
CCDC47-202ENST00000403162 MAT1AQ00266 395 aaKnown RBP17.96■□□□□ 0.47
CCDC47-202ENST00000403162 GK2Q14410 553 aaPredicted RBP17.96■□□□□ 0.47
CCDC47-202ENST00000403162 C2orf68Q2NKX9 166 aa17.96■□□□□ 0.47
CCDC47-202ENST00000403162 ELOA3BQ3SY89 546 aa17.96■□□□□ 0.47
CCDC47-202ENST00000403162 ARHGEF39Q8N4T4 335 aa17.96■□□□□ 0.47
CCDC47-202ENST00000403162 BCORP1Q8N888 145 aa17.96■□□□□ 0.47
CCDC47-202ENST00000403162 ELOA3Q8NG57 546 aa17.96■□□□□ 0.47
CCDC47-202ENST00000403162 COQ8AQ8NI60 647 aa17.96■□□□□ 0.47
CCDC47-202ENST00000403162 ASB13Q8WXK3 278 aa17.96■□□□□ 0.47
CCDC47-202ENST00000403162 ARL6Q9H0F7 186 aa17.96■□□□□ 0.47
CCDC47-202ENST00000403162 SPTY2D1-AS1A0A0U1RR47 76 aa17.96■□□□□ 0.46
CCDC47-202ENST00000403162 LPLP06858 475 aa17.96■□□□□ 0.46
CCDC47-202ENST00000403162 FGF2P09038 288 aa17.96■□□□□ 0.46
CCDC47-202ENST00000403162 ZNF35P13682 527 aa17.96■□□□□ 0.46
CCDC47-202ENST00000403162 CSF2RBP32927 897 aa17.96■□□□□ 0.46
CCDC47-202ENST00000403162 CTXN1P60606 82 aa17.96■□□□□ 0.46
CCDC47-202ENST00000403162 ALG10Q5BKT4 473 aa17.96■□□□□ 0.46
CCDC47-202ENST00000403162 ATG4DQ86TL0 474 aaPredicted RBP17.96■□□□□ 0.46
CCDC47-202ENST00000403162 GPR148Q8TDV2 347 aa17.96■□□□□ 0.46
CCDC47-202ENST00000403162 HRASLS2Q9NWW9 162 aa17.96■□□□□ 0.46
CCDC47-202ENST00000403162 GLS2Q9UI32 602 aa17.96■□□□□ 0.46
CCDC47-202ENST00000403162 LAMP5Q9UJQ1 280 aa17.96■□□□□ 0.46
CCDC47-202ENST00000403162 GON4LQ3T8J9 2241 aa17.95■□□□□ 0.46
CCDC47-202ENST00000403162 HSPB2A8KAH6 182 aa17.95■□□□□ 0.46
CCDC47-202ENST00000403162 TSPAN4O14817 238 aa17.95■□□□□ 0.46
CCDC47-202ENST00000403162 CTAG2O75638 210 aa17.95■□□□□ 0.46
CCDC47-202ENST00000403162 AQP8O94778 261 aa17.95■□□□□ 0.46
CCDC47-202ENST00000403162 SIX6O95475 246 aa17.95■□□□□ 0.46
CCDC47-202ENST00000403162 IGLV3-21P80748 117 aaPredicted RBP17.95■□□□□ 0.46
CCDC47-202ENST00000403162 EGR3Q06889 387 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms