RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 TSPAN10Q9H1Z9 355 aaPredicted RBP12.73□□□□□ -0.37
SCAF4-202ENST00000399804 MCTS1Q9ULC4 181 aaKnown RBP12.73□□□□□ -0.37
SCAF4-202ENST00000399804 SRMP19623 302 aa12.73□□□□□ -0.37
SCAF4-202ENST00000399804 VAMP1P23763 118 aa12.73□□□□□ -0.37
SCAF4-202ENST00000399804 AAED1Q7RTV5 226 aa12.73□□□□□ -0.37
SCAF4-202ENST00000399804 SYS1Q8N2H4 156 aa12.73□□□□□ -0.37
SCAF4-202ENST00000399804 SPTSSAQ969W0 71 aa12.73□□□□□ -0.37
SCAF4-202ENST00000399804 FAM46BQ96A09 425 aa12.73□□□□□ -0.37
SCAF4-202ENST00000399804 KCNE5Q9UJ90 142 aa12.73□□□□□ -0.37
SCAF4-202ENST00000399804 MTCL1Q9Y4B5 1905 aaKnown RBP12.73□□□□□ -0.37
SCAF4-202ENST00000399804 SMAD9O15198 467 aaKnown RBP12.73□□□□□ -0.37
SCAF4-202ENST00000399804 YES1P07947 543 aa12.73□□□□□ -0.37
SCAF4-202ENST00000399804 INHBBP09529 407 aa12.73□□□□□ -0.37
SCAF4-202ENST00000399804 PRSS3P35030 304 aa12.73□□□□□ -0.37
SCAF4-202ENST00000399804 ACAA2P42765 397 aaKnown RBP12.73□□□□□ -0.37
SCAF4-202ENST00000399804 LIMS1P48059 325 aa12.73□□□□□ -0.37
SCAF4-202ENST00000399804 YIF1BQ5BJH7 314 aa12.73□□□□□ -0.37
SCAF4-202ENST00000399804 AWAT2Q6E213 333 aa12.73□□□□□ -0.37
SCAF4-202ENST00000399804 BTN2A1Q7KYR7 527 aa12.73□□□□□ -0.37
SCAF4-202ENST00000399804 ZNF584Q8IVC4 421 aa12.73□□□□□ -0.37
SCAF4-202ENST00000399804 SLC35B4Q969S0 331 aa12.73□□□□□ -0.37
SCAF4-202ENST00000399804 MRGPRX4Q96LA9 322 aa12.73□□□□□ -0.37
SCAF4-202ENST00000399804 PSD2Q9BQI7 771 aa12.73□□□□□ -0.37
SCAF4-202ENST00000399804 URM1Q9BTM9 101 aaKnown RBP12.73□□□□□ -0.37
SCAF4-202ENST00000399804 HCAR1Q9BXC0 346 aa12.73□□□□□ -0.37
SCAF4-202ENST00000399804 NUDT15Q9NV35 164 aa12.73□□□□□ -0.37
SCAF4-202ENST00000399804 SCP2D1Q9UJQ7 156 aa12.73□□□□□ -0.37
SCAF4-202ENST00000399804 ITGB1BP2Q9UKP3 347 aa12.73□□□□□ -0.37
SCAF4-202ENST00000399804 PLEKHA6Q9Y2H5 1048 aa12.73□□□□□ -0.37
SCAF4-202ENST00000399804 ARID1AO14497 2285 aa12.73□□□□□ -0.37
SCAF4-202ENST00000399804 CCDC163A0A0D9SF12 145 aa12.72□□□□□ -0.37
SCAF4-202ENST00000399804 TEX51A0A1B0GUA7 166 aa12.72□□□□□ -0.37
SCAF4-202ENST00000399804 H2AFB2P0C5Z0 115 aa12.72□□□□□ -0.37
SCAF4-202ENST00000399804 NKAPLQ5M9Q1 402 aa12.72□□□□□ -0.37
SCAF4-202ENST00000399804 C1QTNF12Q5T7M4 302 aa12.72□□□□□ -0.37
SCAF4-202ENST00000399804 LRRC69Q6ZNQ3 347 aa12.72□□□□□ -0.37
SCAF4-202ENST00000399804 DHRS1Q96LJ7 313 aa12.72□□□□□ -0.37
SCAF4-202ENST00000399804 KCNG2Q9UJ96 466 aa12.72□□□□□ -0.37
SCAF4-202ENST00000399804 B3GALT5Q9Y2C3 310 aa12.72□□□□□ -0.37
SCAF4-202ENST00000399804 PI4KAP42356 2102 aa12.72□□□□□ -0.37
SCAF4-202ENST00000399804 PGAM2P15259 253 aa12.72□□□□□ -0.37
SCAF4-202ENST00000399804 ARSBP15848 533 aa12.72□□□□□ -0.37
SCAF4-202ENST00000399804 CDK5R1Q15078 307 aa12.72□□□□□ -0.37
SCAF4-202ENST00000399804 SF3A2Q15428 464 aaKnown RBP12.72□□□□□ -0.37
SCAF4-202ENST00000399804 WDR88Q6ZMY6 472 aa12.72□□□□□ -0.37
SCAF4-202ENST00000399804 ESPNLQ6ZVH7 1005 aa12.72□□□□□ -0.37
SCAF4-202ENST00000399804 OR8H1Q8NGG4 311 aa12.72□□□□□ -0.37
SCAF4-202ENST00000399804 OR5D14Q8NGL3 314 aa12.72□□□□□ -0.37
SCAF4-202ENST00000399804 STK35Q8TDR2 534 aa12.72□□□□□ -0.37
SCAF4-202ENST00000399804 CCDC107Q8WV48 283 aa12.72□□□□□ -0.37
SCAF4-202ENST00000399804 CTHRC1Q96CG8 243 aa12.72□□□□□ -0.37
SCAF4-202ENST00000399804 FER1L6-AS2Q96M78 137 aa12.72□□□□□ -0.37
SCAF4-202ENST00000399804 RAB33BQ9H082 229 aa12.72□□□□□ -0.37
SCAF4-202ENST00000399804 EIF3KQ9UBQ5 218 aaKnown RBP12.72□□□□□ -0.37
SCAF4-202ENST00000399804 OIP5O43482 229 aa12.72□□□□□ -0.37
SCAF4-202ENST00000399804 TNFSF15O95150 251 aa12.72□□□□□ -0.37
SCAF4-202ENST00000399804 SLC2A1P11166 492 aa12.72□□□□□ -0.37
SCAF4-202ENST00000399804 GALNSP34059 522 aa12.72□□□□□ -0.37
SCAF4-202ENST00000399804 IFITM3Q01628 133 aa12.72□□□□□ -0.37
SCAF4-202ENST00000399804 INSL4Q14641 139 aa12.72□□□□□ -0.37
SCAF4-202ENST00000399804 CEBPEQ15744 281 aa12.72□□□□□ -0.37
SCAF4-202ENST00000399804 LAIR2Q6ISS4 152 aa12.72□□□□□ -0.37
SCAF4-202ENST00000399804 FAM57BQ71RH2 274 aa12.72□□□□□ -0.37
SCAF4-202ENST00000399804 C9orf40Q8IXQ3 194 aa12.72□□□□□ -0.37
SCAF4-202ENST00000399804 ZNF615Q8N8J6 731 aa12.72□□□□□ -0.37
SCAF4-202ENST00000399804 ELP5Q8TE02 316 aa12.72□□□□□ -0.37
SCAF4-202ENST00000399804 PTP4A1Q93096 173 aa12.72□□□□□ -0.37
SCAF4-202ENST00000399804 ORAI1Q96D31 301 aa12.72□□□□□ -0.37
SCAF4-202ENST00000399804 GNRHR2Q96P88 292 aa12.72□□□□□ -0.37
SCAF4-202ENST00000399804 MRI1Q9BV20 369 aa12.72□□□□□ -0.37
SCAF4-202ENST00000399804 TWSG1Q9GZX9 223 aa12.72□□□□□ -0.37
SCAF4-202ENST00000399804 ENKD1Q9H0I2 346 aa12.72□□□□□ -0.37
SCAF4-202ENST00000399804 NUFIP1Q9UHK0 495 aaKnown RBP12.72□□□□□ -0.37
SCAF4-202ENST00000399804 ANKUB1A6NFN9 424 aa12.71□□□□□ -0.37
SCAF4-202ENST00000399804 MTRF1O75570 445 aaKnown RBP12.71□□□□□ -0.37
SCAF4-202ENST00000399804 MPIG6BO95866 241 aa12.71□□□□□ -0.37
SCAF4-202ENST00000399804 CD46P15529 392 aa12.71□□□□□ -0.37
SCAF4-202ENST00000399804 SELENBP1Q13228 472 aa12.71□□□□□ -0.37
SCAF4-202ENST00000399804 METAP1DQ6UB28 335 aaPredicted RBP12.71□□□□□ -0.37
SCAF4-202ENST00000399804 SMIM19Q96E16 107 aa12.71□□□□□ -0.37
SCAF4-202ENST00000399804 SGCZQ96LD1 299 aa12.71□□□□□ -0.37
SCAF4-202ENST00000399804 PRSS27Q9BQR3 290 aa12.71□□□□□ -0.37
SCAF4-202ENST00000399804 OR10A4Q9H209 315 aa12.71□□□□□ -0.37
SCAF4-202ENST00000399804 MEIS3P1A6NDR6 274 aa12.71□□□□□ -0.37
SCAF4-202ENST00000399804 BHLHE40O14503 412 aa12.71□□□□□ -0.37
SCAF4-202ENST00000399804 TMEM225BP0DP42 221 aa12.71□□□□□ -0.37
SCAF4-202ENST00000399804 CDKN2AP42771 156 aaKnown RBP12.71□□□□□ -0.37
SCAF4-202ENST00000399804 CRYBB2P43320 205 aa12.71□□□□□ -0.37
SCAF4-202ENST00000399804 BDH1Q02338 343 aa12.71□□□□□ -0.37
SCAF4-202ENST00000399804 LTBQ06643 244 aa12.71□□□□□ -0.37
SCAF4-202ENST00000399804 OR13C9Q8NGT0 318 aa12.71□□□□□ -0.37
SCAF4-202ENST00000399804 CPNE2Q96FN4 548 aaPredicted RBP12.71□□□□□ -0.37
SCAF4-202ENST00000399804 SLC22A11Q9NSA0 550 aa12.71□□□□□ -0.37
SCAF4-202ENST00000399804 LRFN1Q9P244 771 aa12.71□□□□□ -0.37
SCAF4-202ENST00000399804 B9D1Q9UPM9 204 aa12.71□□□□□ -0.37
SCAF4-202ENST00000399804 SLC7A11Q9UPY5 501 aa12.71□□□□□ -0.37
SCAF4-202ENST00000399804 TMEM184BQ9Y519 407 aaPredicted RBP12.71□□□□□ -0.37
SCAF4-202ENST00000399804 WIF1Q9Y5W5 379 aa12.71□□□□□ -0.37
SCAF4-202ENST00000399804 P2RY10O00398 339 aa12.71□□□□□ -0.38
SCAF4-202ENST00000399804 MRPL33O75394 65 aaKnown RBP12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms