RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 ACOT11Q8WXI4 607 aaPredicted RBP5.6□□□□□ -1.51
TRAPPC13-202ENST00000399438 TMEM45BQ96B21 275 aa5.6□□□□□ -1.51
TRAPPC13-202ENST00000399438 EXOSC8Q96B26 276 aaKnown RBP5.6□□□□□ -1.51
TRAPPC13-202ENST00000399438 MTERF3Q96E29 417 aa5.6□□□□□ -1.51
TRAPPC13-202ENST00000399438 OMA1Q96E52 524 aa5.6□□□□□ -1.51
TRAPPC13-202ENST00000399438 PYURFQ96I23 114 aa5.6□□□□□ -1.51
TRAPPC13-202ENST00000399438 F2RL3Q96RI0 385 aa5.6□□□□□ -1.51
TRAPPC13-202ENST00000399438 IL4I1Q96RQ9 567 aa5.6□□□□□ -1.51
TRAPPC13-202ENST00000399438 PRSS16Q9NQE7 514 aa5.6□□□□□ -1.51
TRAPPC13-202ENST00000399438 THUMPD1Q9NXG2 353 aaKnown RBP5.6□□□□□ -1.51
TRAPPC13-202ENST00000399438 MMACHCQ9Y4U1 282 aa5.6□□□□□ -1.51
TRAPPC13-202ENST00000399438 COL4A4P53420 1690 aaPredicted RBP5.6□□□□□ -1.51
TRAPPC13-202ENST00000399438 TRPM6Q9BX84 2022 aa5.6□□□□□ -1.51
TRAPPC13-202ENST00000399438 PPIAL4EA0A075B759 164 aa5.6□□□□□ -1.51
TRAPPC13-202ENST00000399438 ZNF729A6NN14 1252 aaPredicted RBP5.6□□□□□ -1.51
TRAPPC13-202ENST00000399438 C5orf67F2Z3F1 127 aa5.6□□□□□ -1.51
TRAPPC13-202ENST00000399438 CSN3P07498 182 aa5.6□□□□□ -1.51
TRAPPC13-202ENST00000399438 PPIAL4FP0DN26 164 aa5.6□□□□□ -1.51
TRAPPC13-202ENST00000399438 NR2C1P13056 603 aa5.6□□□□□ -1.51
TRAPPC13-202ENST00000399438 RPS3P23396 243 aaKnown RBP eCLIP5.6□□□□□ -1.51
TRAPPC13-202ENST00000399438 STOMP27105 288 aa5.6□□□□□ -1.51
TRAPPC13-202ENST00000399438 NDUFS1P28331 727 aa5.6□□□□□ -1.51
TRAPPC13-202ENST00000399438 NPBWR2P48146 333 aa5.6□□□□□ -1.51
TRAPPC13-202ENST00000399438 GP2P55259 537 aaKnown RBP5.6□□□□□ -1.51
TRAPPC13-202ENST00000399438 RAE1P78406 368 aaKnown RBP5.6□□□□□ -1.51
TRAPPC13-202ENST00000399438 IL13RA1P78552 427 aa5.6□□□□□ -1.51
TRAPPC13-202ENST00000399438 MRPS34P82930 218 aaKnown RBP5.6□□□□□ -1.51
TRAPPC13-202ENST00000399438 C2orf80Q0P641 193 aa5.6□□□□□ -1.51
TRAPPC13-202ENST00000399438 RTP5Q14D33 572 aa5.6□□□□□ -1.51
TRAPPC13-202ENST00000399438 NPTX1Q15818 432 aa5.6□□□□□ -1.51
TRAPPC13-202ENST00000399438 ZNF773Q6PK81 442 aa5.6□□□□□ -1.51
TRAPPC13-202ENST00000399438 SLCO6A1Q86UG4 719 aa5.6□□□□□ -1.51
TRAPPC13-202ENST00000399438 ERI1Q8IV48 349 aaKnown RBP5.6□□□□□ -1.51
TRAPPC13-202ENST00000399438 OR8J3Q8NGG0 315 aa5.6□□□□□ -1.51
TRAPPC13-202ENST00000399438 HGDQ93099 445 aa5.6□□□□□ -1.51
TRAPPC13-202ENST00000399438 CCDC120Q96HB5 630 aa5.6□□□□□ -1.51
TRAPPC13-202ENST00000399438 PRAP1Q96NZ9 151 aa5.6□□□□□ -1.51
TRAPPC13-202ENST00000399438 C17orf62Q9BQA9 187 aa5.6□□□□□ -1.51
TRAPPC13-202ENST00000399438 SLC28A3Q9HAS3 691 aa5.6□□□□□ -1.51
TRAPPC13-202ENST00000399438 TRIM36Q9NQ86 728 aa5.6□□□□□ -1.51
TRAPPC13-202ENST00000399438 TAC3Q9UHF0 121 aa5.6□□□□□ -1.51
TRAPPC13-202ENST00000399438 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.6□□□□□ -1.51
TRAPPC13-202ENST00000399438 PPIAL4AQ9Y536 164 aa5.6□□□□□ -1.51
TRAPPC13-202ENST00000399438 AUP1Q9Y679 476 aa5.6□□□□□ -1.51
TRAPPC13-202ENST00000399438 SH3PXD2BA1X283 911 aa5.59□□□□□ -1.51
TRAPPC13-202ENST00000399438 POP7O75817 140 aaKnown RBP5.59□□□□□ -1.51
TRAPPC13-202ENST00000399438 RGS9O75916 674 aaPredicted RBP5.59□□□□□ -1.51
TRAPPC13-202ENST00000399438 IL3P08700 152 aa5.59□□□□□ -1.51
TRAPPC13-202ENST00000399438 RNH1P13489 461 aaKnown RBP5.59□□□□□ -1.51
TRAPPC13-202ENST00000399438 ST6GAL1P15907 406 aa5.59□□□□□ -1.51
TRAPPC13-202ENST00000399438 MMP11P24347 488 aa5.59□□□□□ -1.51
TRAPPC13-202ENST00000399438 KDELR2P33947 212 aa5.59□□□□□ -1.51
TRAPPC13-202ENST00000399438 HLCSP50747 726 aa5.59□□□□□ -1.51
TRAPPC13-202ENST00000399438 ERVK-25P63136 954 aa5.59□□□□□ -1.51
TRAPPC13-202ENST00000399438 SNRPNP63162 240 aaKnown RBP5.59□□□□□ -1.51
TRAPPC13-202ENST00000399438 HOXC5Q00444 222 aa5.59□□□□□ -1.51
TRAPPC13-202ENST00000399438 EMX1Q04741 257 aaPredicted RBP5.59□□□□□ -1.51
TRAPPC13-202ENST00000399438 DOC2BQ14184 412 aa5.59□□□□□ -1.51
TRAPPC13-202ENST00000399438 VMACQ2NL98 169 aa5.59□□□□□ -1.51
TRAPPC13-202ENST00000399438 GPR33Q49SQ1 333 aa5.59□□□□□ -1.51
TRAPPC13-202ENST00000399438 LINC01620Q4KN68 170 aa5.59□□□□□ -1.51
TRAPPC13-202ENST00000399438 OR2T5Q6IEZ7 315 aa5.59□□□□□ -1.51
TRAPPC13-202ENST00000399438 CAPN13Q6MZZ7 669 aaPredicted RBP5.59□□□□□ -1.51
TRAPPC13-202ENST00000399438 COMMD6Q7Z4G1 85 aa5.59□□□□□ -1.51
TRAPPC13-202ENST00000399438 HAPLN4Q86UW8 402 aa5.59□□□□□ -1.51
TRAPPC13-202ENST00000399438 APLFQ8IW19 511 aaPredicted RBP5.59□□□□□ -1.51
TRAPPC13-202ENST00000399438 CYP4Z2PQ8N1L4 340 aa5.59□□□□□ -1.51
TRAPPC13-202ENST00000399438 SLC5A8Q8N695 610 aa5.59□□□□□ -1.51
TRAPPC13-202ENST00000399438 SDR9C7Q8NEX9 313 aa5.59□□□□□ -1.51
TRAPPC13-202ENST00000399438 OR2T29Q8NH02 315 aa5.59□□□□□ -1.51
TRAPPC13-202ENST00000399438 OR2V1Q8NHB1 315 aa5.59□□□□□ -1.51
TRAPPC13-202ENST00000399438 ZFP90Q8TF47 636 aa5.59□□□□□ -1.51
TRAPPC13-202ENST00000399438 CPNE4Q96A23 557 aaPredicted RBP5.59□□□□□ -1.51
TRAPPC13-202ENST00000399438 WDR92Q96MX6 357 aa5.59□□□□□ -1.51
TRAPPC13-202ENST00000399438 GPR137Q96N19 417 aa5.59□□□□□ -1.51
TRAPPC13-202ENST00000399438 TNFRSF13CQ96RJ3 184 aa5.59□□□□□ -1.51
TRAPPC13-202ENST00000399438 NODALQ96S42 347 aa5.59□□□□□ -1.51
TRAPPC13-202ENST00000399438 NIPSNAP1Q9BPW8 284 aa5.59□□□□□ -1.51
TRAPPC13-202ENST00000399438 MRI1Q9BV20 369 aa5.59□□□□□ -1.51
TRAPPC13-202ENST00000399438 ELOVL1Q9BW60 279 aa5.59□□□□□ -1.51
TRAPPC13-202ENST00000399438 MAP1LC3CQ9BXW4 147 aa5.59□□□□□ -1.51
TRAPPC13-202ENST00000399438 PIGMQ9H3S5 423 aa5.59□□□□□ -1.51
TRAPPC13-202ENST00000399438 GPR83Q9NYM4 423 aa5.59□□□□□ -1.51
TRAPPC13-202ENST00000399438 IL36AQ9UHA7 158 aa5.59□□□□□ -1.51
TRAPPC13-202ENST00000399438 STOML2Q9UJZ1 356 aa5.59□□□□□ -1.51
TRAPPC13-202ENST00000399438 HS3ST2Q9Y278 367 aa5.59□□□□□ -1.51
TRAPPC13-202ENST00000399438 ZNF175Q9Y473 711 aa5.59□□□□□ -1.51
TRAPPC13-202ENST00000399438 CABIN1Q9Y6J0 2220 aa5.59□□□□□ -1.51
TRAPPC13-202ENST00000399438 TCF20Q9UGU0 1960 aaKnown RBP5.59□□□□□ -1.51
TRAPPC13-202ENST00000399438 FREM2Q5SZK8 3169 aa5.59□□□□□ -1.51
TRAPPC13-202ENST00000399438 TRBV5-3A0A0A0MS03 114 aa5.59□□□□□ -1.51
TRAPPC13-202ENST00000399438 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.59□□□□□ -1.51
TRAPPC13-202ENST00000399438 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.59□□□□□ -1.51
TRAPPC13-202ENST00000399438 A0A1W2PPK0 400 aa5.59□□□□□ -1.51
TRAPPC13-202ENST00000399438 NPIPA7E9PJI5 369 aa5.59□□□□□ -1.51
TRAPPC13-202ENST00000399438 AQP9O43315 295 aa5.59□□□□□ -1.51
TRAPPC13-202ENST00000399438 OR10H2O60403 315 aa5.59□□□□□ -1.51
TRAPPC13-202ENST00000399438 OXSR1O95747 527 aaPredicted RBP5.59□□□□□ -1.51
TRAPPC13-202ENST00000399438 NPIPA8P0DM63 369 aa5.59□□□□□ -1.51
TRAPPC13-202ENST00000399438 EIF2S3P41091 472 aaKnown RBP5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms