RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 MFSD13AQ14CX5 517 aa13.4□□□□□ -0.26
RPRD1A-202ENST00000399022 SHISA6Q6ZSJ9 500 aa13.4□□□□□ -0.26
RPRD1A-202ENST00000399022 GPR32P1Q8NGA4 272 aa13.4□□□□□ -0.26
RPRD1A-202ENST00000399022 FAM3CQ92520 227 aa13.4□□□□□ -0.26
RPRD1A-202ENST00000399022 PTP4A1Q93096 173 aa13.4□□□□□ -0.26
RPRD1A-202ENST00000399022 CNTNAP3Q9BZ76 1288 aa13.4□□□□□ -0.26
RPRD1A-202ENST00000399022 MYOFQ9NZM1 2061 aa13.4□□□□□ -0.26
RPRD1A-202ENST00000399022 TAS2R31P59538 309 aa13.4□□□□□ -0.26
RPRD1A-202ENST00000399022 BDH1Q02338 343 aa13.4□□□□□ -0.26
RPRD1A-202ENST00000399022 PLA1AQ53H76 456 aa13.4□□□□□ -0.26
RPRD1A-202ENST00000399022 FRMD1Q8N878 549 aa13.4□□□□□ -0.26
RPRD1A-202ENST00000399022 FAM71CQ8NEG0 241 aa13.4□□□□□ -0.26
RPRD1A-202ENST00000399022 GPATCH2Q9NW75 528 aa13.4□□□□□ -0.26
RPRD1A-202ENST00000399022 PARPBPQ9NWS1 579 aa13.4□□□□□ -0.26
RPRD1A-202ENST00000399022 A4GNTQ9UNA3 340 aa13.4□□□□□ -0.26
RPRD1A-202ENST00000399022 HIF3AQ9Y2N7 669 aa13.4□□□□□ -0.26
RPRD1A-202ENST00000399022 A0A0J9YY10 115 aa13.4□□□□□ -0.26
RPRD1A-202ENST00000399022 SUSD5O60279 629 aa13.4□□□□□ -0.26
RPRD1A-202ENST00000399022 GABRA1P14867 456 aa13.4□□□□□ -0.26
RPRD1A-202ENST00000399022 BSGP35613 385 aa13.4□□□□□ -0.26
RPRD1A-202ENST00000399022 GLP1RP43220 463 aa13.4□□□□□ -0.26
RPRD1A-202ENST00000399022 RABIFP47224 123 aa13.4□□□□□ -0.26
RPRD1A-202ENST00000399022 CSRP3P50461 194 aa13.4□□□□□ -0.26
RPRD1A-202ENST00000399022 NSDHLQ15738 373 aa13.4□□□□□ -0.26
RPRD1A-202ENST00000399022 GXYLT1Q4G148 440 aa13.4□□□□□ -0.26
RPRD1A-202ENST00000399022 ALG10Q5BKT4 473 aa13.4□□□□□ -0.26
RPRD1A-202ENST00000399022 SFTPA1Q8IWL2 248 aa13.4□□□□□ -0.26
RPRD1A-202ENST00000399022 OR13C9Q8NGT0 318 aa13.4□□□□□ -0.26
RPRD1A-202ENST00000399022 PFN4Q8NHR9 129 aa13.4□□□□□ -0.26
RPRD1A-202ENST00000399022 RNF170Q96K19 258 aa13.4□□□□□ -0.26
RPRD1A-202ENST00000399022 URM1Q9BTM9 101 aaKnown RBP13.4□□□□□ -0.26
RPRD1A-202ENST00000399022 CSNK2A1P68400 391 aaPredicted RBP13.4□□□□□ -0.27
RPRD1A-202ENST00000399022 PLCXD2Q0VAA5 305 aa13.4□□□□□ -0.27
RPRD1A-202ENST00000399022 P4HA3Q7Z4N8 544 aa13.4□□□□□ -0.27
RPRD1A-202ENST00000399022 MCATQ8IVS2 390 aaKnown RBP13.4□□□□□ -0.27
RPRD1A-202ENST00000399022 CSNK2A3Q8NEV1 391 aa13.4□□□□□ -0.27
RPRD1A-202ENST00000399022 MRGPRX3Q96LB0 322 aa13.4□□□□□ -0.27
RPRD1A-202ENST00000399022 HHIPQ96QV1 700 aa13.4□□□□□ -0.27
RPRD1A-202ENST00000399022 PPP4R1LQ9P1A2 415 aa13.4□□□□□ -0.27
RPRD1A-202ENST00000399022 NCDNQ9UBB6 729 aa13.4□□□□□ -0.27
RPRD1A-202ENST00000399022 PPIL1Q9Y3C6 166 aa13.4□□□□□ -0.27
RPRD1A-202ENST00000399022 SLC22A23A1A5C7 686 aa13.39□□□□□ -0.27
RPRD1A-202ENST00000399022 CDC14CA4D256 554 aa13.39□□□□□ -0.27
RPRD1A-202ENST00000399022 FITM1A5D6W6 292 aa13.39□□□□□ -0.27
RPRD1A-202ENST00000399022 CD3DP04234 171 aa13.39□□□□□ -0.27
RPRD1A-202ENST00000399022 NME1P15531 152 aaKnown RBP13.39□□□□□ -0.27
RPRD1A-202ENST00000399022 ITGB8P26012 769 aa13.39□□□□□ -0.27
RPRD1A-202ENST00000399022 EPHA4P54764 986 aa13.39□□□□□ -0.27
RPRD1A-202ENST00000399022 CLDN6P56747 220 aa13.39□□□□□ -0.27
RPRD1A-202ENST00000399022 ETFDHQ16134 617 aa13.39□□□□□ -0.27
RPRD1A-202ENST00000399022 TRMT12Q53H54 448 aaKnown RBP13.39□□□□□ -0.27
RPRD1A-202ENST00000399022 SLC18B1Q6NT16 456 aa13.39□□□□□ -0.27
RPRD1A-202ENST00000399022 NAXDQ8IW45 347 aa13.39□□□□□ -0.27
RPRD1A-202ENST00000399022 RNF113BQ8IZP6 322 aaKnown RBP13.39□□□□□ -0.27
RPRD1A-202ENST00000399022 OR4C16Q8NGL9 310 aa13.39□□□□□ -0.27
RPRD1A-202ENST00000399022 ALG12Q9BV10 488 aa13.39□□□□□ -0.27
RPRD1A-202ENST00000399022 ULBP3Q9BZM4 244 aa13.39□□□□□ -0.27
RPRD1A-202ENST00000399022 CHRDQ9H2X0 955 aa13.39□□□□□ -0.27
RPRD1A-202ENST00000399022 GPR160Q9UJ42 338 aa13.39□□□□□ -0.27
RPRD1A-202ENST00000399022 URGCP-MRPS24S4R325 110 aa13.39□□□□□ -0.27
RPRD1A-202ENST00000399022 TDRD15B5MCY1 1934 aaKnown RBP13.39□□□□□ -0.27
RPRD1A-202ENST00000399022 IMPA2O14732 288 aa13.39□□□□□ -0.27
RPRD1A-202ENST00000399022 SEC14L5O43304 696 aa13.39□□□□□ -0.27
RPRD1A-202ENST00000399022 CHRM4P08173 479 aa13.39□□□□□ -0.27
RPRD1A-202ENST00000399022 ARF1P84077 181 aaKnown RBP13.39□□□□□ -0.27
RPRD1A-202ENST00000399022 DEFB133Q30KQ1 61 aa13.39□□□□□ -0.27
RPRD1A-202ENST00000399022 PHF19Q5T6S3 580 aa13.39□□□□□ -0.27
RPRD1A-202ENST00000399022 AWAT2Q6E213 333 aa13.39□□□□□ -0.27
RPRD1A-202ENST00000399022 CORO6Q6QEF8 472 aa13.39□□□□□ -0.27
RPRD1A-202ENST00000399022 RAB3CQ96E17 227 aa13.39□□□□□ -0.27
RPRD1A-202ENST00000399022 GHITMQ9H3K2 345 aa13.39□□□□□ -0.27
RPRD1A-202ENST00000399022 ENTPD2Q9Y5L3 495 aa13.39□□□□□ -0.27
RPRD1A-202ENST00000399022 ETV7Q9Y603 341 aa13.39□□□□□ -0.27
RPRD1A-202ENST00000399022 PIKFYVEQ9Y2I7 2098 aa13.39□□□□□ -0.27
RPRD1A-202ENST00000399022 C7orf66A4D0T2 115 aa13.39□□□□□ -0.27
RPRD1A-202ENST00000399022 NPIPA5E9PKD4 350 aa13.39□□□□□ -0.27
RPRD1A-202ENST00000399022 PPP1R2P9O14990 202 aa13.39□□□□□ -0.27
RPRD1A-202ENST00000399022 SELENOFO60613 162 aa13.39□□□□□ -0.27
RPRD1A-202ENST00000399022 EIF2S3P41091 472 aaKnown RBP13.39□□□□□ -0.27
RPRD1A-202ENST00000399022 HOXA1P49639 335 aaPredicted RBP13.39□□□□□ -0.27
RPRD1A-202ENST00000399022 AFF3P51826 1226 aaKnown RBP13.39□□□□□ -0.27
RPRD1A-202ENST00000399022 SOHLH1Q5JUK2 328 aa13.39□□□□□ -0.27
RPRD1A-202ENST00000399022 COMTD1Q86VU5 262 aa13.39□□□□□ -0.27
RPRD1A-202ENST00000399022 PHYHIPQ92561 330 aa13.39□□□□□ -0.27
RPRD1A-202ENST00000399022 MARVELD3Q96A59 401 aa13.39□□□□□ -0.27
RPRD1A-202ENST00000399022 ZDHHC12Q96GR4 267 aa13.39□□□□□ -0.27
RPRD1A-202ENST00000399022 ST6GALNAC5Q9BVH7 336 aa13.39□□□□□ -0.27
RPRD1A-202ENST00000399022 PURGQ9UJV8 347 aaKnown RBP13.39□□□□□ -0.27
RPRD1A-202ENST00000399022 NPIPA1Q9UND3 350 aa13.39□□□□□ -0.27
RPRD1A-202ENST00000399022 CHATP28329 748 aa13.38□□□□□ -0.27
RPRD1A-202ENST00000399022 P2RX1P51575 399 aa13.38□□□□□ -0.27
RPRD1A-202ENST00000399022 CAV2P51636 162 aa13.38□□□□□ -0.27
RPRD1A-202ENST00000399022 CDK5Q00535 292 aa13.38□□□□□ -0.27
RPRD1A-202ENST00000399022 GPNMBQ14956 572 aa13.38□□□□□ -0.27
RPRD1A-202ENST00000399022 PPP1R1CQ8WVI7 109 aa13.38□□□□□ -0.27
RPRD1A-202ENST00000399022 FAM3DQ96BQ1 224 aa13.38□□□□□ -0.27
RPRD1A-202ENST00000399022 C19orf43Q9BQ61 176 aa13.38□□□□□ -0.27
RPRD1A-202ENST00000399022 LUZP4Q9P127 313 aa13.38□□□□□ -0.27
RPRD1A-202ENST00000399022 YKT6O15498 198 aa13.38□□□□□ -0.27
RPRD1A-202ENST00000399022 DNAJB6O75190 326 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms