RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 F13BP05160 661 aa11.59□□□□□ -0.55
VCX3A-202ENST00000398729 ERCC1P07992 297 aaPredicted RBP11.59□□□□□ -0.55
VCX3A-202ENST00000398729 QDPRP09417 244 aa11.59□□□□□ -0.55
VCX3A-202ENST00000398729 NR4A1P22736 598 aa11.59□□□□□ -0.55
VCX3A-202ENST00000398729 GIPRP48546 466 aa11.59□□□□□ -0.55
VCX3A-202ENST00000398729 DAP3P51398 398 aaKnown RBP11.59□□□□□ -0.55
VCX3A-202ENST00000398729 TMEM249Q2WGJ8 235 aa11.59□□□□□ -0.55
VCX3A-202ENST00000398729 LRFN4Q6PJG9 635 aa11.59□□□□□ -0.55
VCX3A-202ENST00000398729 SKA3Q8IX90 412 aa11.59□□□□□ -0.55
VCX3A-202ENST00000398729 SLC15A3Q8IY34 581 aa11.59□□□□□ -0.55
VCX3A-202ENST00000398729 SVOPLQ8N434 492 aa11.59□□□□□ -0.55
VCX3A-202ENST00000398729 SLC22A24Q8N4F4 322 aa11.59□□□□□ -0.55
VCX3A-202ENST00000398729 ANKS4BQ8N8V4 417 aa11.59□□□□□ -0.55
VCX3A-202ENST00000398729 LIPHQ8WWY8 451 aa11.59□□□□□ -0.55
VCX3A-202ENST00000398729 PRRC1Q96M27 445 aa11.59□□□□□ -0.55
VCX3A-202ENST00000398729 ZNF75AQ96N20 296 aa11.59□□□□□ -0.55
VCX3A-202ENST00000398729 HOPXQ9BPY8 73 aaPredicted RBP11.59□□□□□ -0.55
VCX3A-202ENST00000398729 EFCAB1Q9HAE3 211 aa11.59□□□□□ -0.55
VCX3A-202ENST00000398729 INIPQ9NRY2 104 aa11.59□□□□□ -0.55
VCX3A-202ENST00000398729 STX18Q9P2W9 335 aaKnown RBP11.59□□□□□ -0.55
VCX3A-202ENST00000398729 CMAHPQ9Y471 501 aa11.59□□□□□ -0.55
VCX3A-202ENST00000398729 LOC390937A0A1W2PQ73 354 aa11.58□□□□□ -0.56
VCX3A-202ENST00000398729 HTR3EA5X5Y0 456 aa11.58□□□□□ -0.56
VCX3A-202ENST00000398729 A8MV72 311 aaPredicted RBP11.58□□□□□ -0.56
VCX3A-202ENST00000398729 CENPBD1B2RD01 187 aa11.58□□□□□ -0.56
VCX3A-202ENST00000398729 NDUFAB1O14561 156 aa11.58□□□□□ -0.56
VCX3A-202ENST00000398729 PHF1O43189 567 aaPredicted RBP11.58□□□□□ -0.56
VCX3A-202ENST00000398729 SERPINA5P05154 406 aa11.58□□□□□ -0.56
VCX3A-202ENST00000398729 ZNF35P13682 527 aa11.58□□□□□ -0.56
VCX3A-202ENST00000398729 USF1P22415 310 aaPredicted RBP11.58□□□□□ -0.56
VCX3A-202ENST00000398729 LSP1P33241 339 aa11.58□□□□□ -0.56
VCX3A-202ENST00000398729 AQP2P41181 271 aa11.58□□□□□ -0.56
VCX3A-202ENST00000398729 ZNF84P51523 738 aa11.58□□□□□ -0.56
VCX3A-202ENST00000398729 VLDLRP98155 873 aa11.58□□□□□ -0.56
VCX3A-202ENST00000398729 GALK2Q01415 458 aa11.58□□□□□ -0.56
VCX3A-202ENST00000398729 LIPEQ05469 1076 aa11.58□□□□□ -0.56
VCX3A-202ENST00000398729 GKAP1Q5VSY0 366 aaPredicted RBP11.58□□□□□ -0.56
VCX3A-202ENST00000398729 DPPA2Q7Z7J5 298 aa11.58□□□□□ -0.56
VCX3A-202ENST00000398729 ASB10Q8WXI3 467 aa11.58□□□□□ -0.56
VCX3A-202ENST00000398729 MCHR2Q969V1 340 aa11.58□□□□□ -0.56
VCX3A-202ENST00000398729 DOK1Q99704 481 aa11.58□□□□□ -0.56
VCX3A-202ENST00000398729 PIMREGQ9BSJ6 248 aa11.58□□□□□ -0.56
VCX3A-202ENST00000398729 DYNLRB1Q9NP97 96 aa11.58□□□□□ -0.56
VCX3A-202ENST00000398729 A4GNTQ9UNA3 340 aa11.58□□□□□ -0.56
VCX3A-202ENST00000398729 TMEM129A0AVI4 362 aa11.57□□□□□ -0.56
VCX3A-202ENST00000398729 SH3PXD2BA1X283 911 aa11.57□□□□□ -0.56
VCX3A-202ENST00000398729 VWC2LB2RUY7 222 aa11.57□□□□□ -0.56
VCX3A-202ENST00000398729 CXCR6O00574 342 aa11.57□□□□□ -0.56
VCX3A-202ENST00000398729 GSTA4O15217 222 aa11.57□□□□□ -0.56
VCX3A-202ENST00000398729 ATP8B1O43520 1251 aa11.57□□□□□ -0.56
VCX3A-202ENST00000398729 PIP5K1CO60331 668 aa11.57□□□□□ -0.56
VCX3A-202ENST00000398729 TRMUO75648 421 aaKnown RBP11.57□□□□□ -0.56
VCX3A-202ENST00000398729 IFNW1P05000 195 aa11.57□□□□□ -0.56
VCX3A-202ENST00000398729 TSPAN19P0C672 248 aa11.57□□□□□ -0.56
VCX3A-202ENST00000398729 PATE4P0C8F1 98 aa11.57□□□□□ -0.56
VCX3A-202ENST00000398729 ACADSP16219 412 aa11.57□□□□□ -0.56
VCX3A-202ENST00000398729 GLRXP35754 106 aa11.57□□□□□ -0.56
VCX3A-202ENST00000398729 NUDT2P50583 147 aa11.57□□□□□ -0.56
VCX3A-202ENST00000398729 SLC7A2P52569 658 aa11.57□□□□□ -0.56
VCX3A-202ENST00000398729 RPS23P62266 143 aaKnown RBP11.57□□□□□ -0.56
VCX3A-202ENST00000398729 LSM11P83369 360 aaKnown RBP eCLIP11.57□□□□□ -0.56
VCX3A-202ENST00000398729 RUNX1T1Q06455 604 aa11.57□□□□□ -0.56
VCX3A-202ENST00000398729 RAB39AQ14964 217 aa11.57□□□□□ -0.56
VCX3A-202ENST00000398729 CARTPTQ16568 116 aa11.57□□□□□ -0.56
VCX3A-202ENST00000398729 HIST3H3Q16695 136 aa11.57□□□□□ -0.56
VCX3A-202ENST00000398729 SLC36A2Q495M3 483 aa11.57□□□□□ -0.56
VCX3A-202ENST00000398729 NRN1LQ496H8 165 aa11.57□□□□□ -0.56
VCX3A-202ENST00000398729 SYT14Q8NB59 555 aa11.57□□□□□ -0.56
VCX3A-202ENST00000398729 NOXO1Q8NFA2 376 aa11.57□□□□□ -0.56
VCX3A-202ENST00000398729 MOSPD2Q8NHP6 518 aa11.57□□□□□ -0.56
VCX3A-202ENST00000398729 NEU4Q8WWR8 484 aaPredicted RBP11.57□□□□□ -0.56
VCX3A-202ENST00000398729 GEMIN6Q8WXD5 167 aaKnown RBP11.57□□□□□ -0.56
VCX3A-202ENST00000398729 MRPL24Q96A35 216 aaKnown RBP11.57□□□□□ -0.56
VCX3A-202ENST00000398729 BPIFA2Q96DR5 249 aa11.57□□□□□ -0.56
VCX3A-202ENST00000398729 ZNF347Q96SE7 839 aa11.57□□□□□ -0.56
VCX3A-202ENST00000398729 SEPHS2Q99611 448 aa11.57□□□□□ -0.56
VCX3A-202ENST00000398729 SH3GL3Q99963 347 aa11.57□□□□□ -0.56
VCX3A-202ENST00000398729 FNDC11Q9BVV2 318 aa11.57□□□□□ -0.56
VCX3A-202ENST00000398729 MRPL13Q9BYD1 178 aaKnown RBP11.57□□□□□ -0.56
VCX3A-202ENST00000398729 RNF121Q9H920 327 aa11.57□□□□□ -0.56
VCX3A-202ENST00000398729 YLPM1P49750 1951 aaKnown RBP11.56□□□□□ -0.56
VCX3A-202ENST00000398729 NPIPB13A6NJU9 1138 aa11.56□□□□□ -0.56
VCX3A-202ENST00000398729 NPIPB4C9JG80 1138 aa11.56□□□□□ -0.56
VCX3A-202ENST00000398729 NME4O00746 187 aa11.56□□□□□ -0.56
VCX3A-202ENST00000398729 MGRN1O60291 552 aa11.56□□□□□ -0.56
VCX3A-202ENST00000398729 ZNF682O95780 498 aa11.56□□□□□ -0.56
VCX3A-202ENST00000398729 NR2C1P13056 603 aa11.56□□□□□ -0.56
VCX3A-202ENST00000398729 IFI30P13284 250 aa11.56□□□□□ -0.56
VCX3A-202ENST00000398729 NR4A2P43354 598 aa11.56□□□□□ -0.56
VCX3A-202ENST00000398729 YAP1P46937 504 aaKnown RBP11.56□□□□□ -0.56
VCX3A-202ENST00000398729 EVX1P49640 407 aa11.56□□□□□ -0.56
VCX3A-202ENST00000398729 MYBPC1Q00872 1141 aa11.56□□□□□ -0.56
VCX3A-202ENST00000398729 GGTLC2Q14390 218 aa11.56□□□□□ -0.56
VCX3A-202ENST00000398729 LAPTM4AQ15012 233 aa11.56□□□□□ -0.56
VCX3A-202ENST00000398729 TRAM2Q15035 370 aa11.56□□□□□ -0.56
VCX3A-202ENST00000398729 IFI44LQ53G44 452 aa11.56□□□□□ -0.56
VCX3A-202ENST00000398729 ALG10Q5BKT4 473 aa11.56□□□□□ -0.56
VCX3A-202ENST00000398729 C6orf52Q5T4I8 152 aa11.56□□□□□ -0.56
VCX3A-202ENST00000398729 CYB5R2Q6BCY4 276 aa11.56□□□□□ -0.56
VCX3A-202ENST00000398729 C8orf82Q6P1X6 216 aaPredicted RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms