RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 ACVR1BP36896 505 aa22.34■■□□□ 1.17
U2AF1-203ENST00000398137 CSNK1A1P48729 337 aa22.34■■□□□ 1.17
U2AF1-203ENST00000398137 CLEC12AQ5QGZ9 265 aa22.34■■□□□ 1.17
U2AF1-203ENST00000398137 PHYHD1Q5SRE7 291 aa22.34■■□□□ 1.17
U2AF1-203ENST00000398137 FAHD1Q6P587 224 aa22.34■■□□□ 1.17
U2AF1-203ENST00000398137 CD300LDQ6UXZ3 194 aa22.34■■□□□ 1.17
U2AF1-203ENST00000398137 DPY19L2P2Q6ZN68 376 aa22.34■■□□□ 1.17
U2AF1-203ENST00000398137 FAM122BQ7Z309 247 aa22.34■■□□□ 1.17
U2AF1-203ENST00000398137 PQLC1Q8N2U9 271 aa22.34■■□□□ 1.17
U2AF1-203ENST00000398137 OR52L1Q8NGH7 329 aa22.34■■□□□ 1.17
U2AF1-203ENST00000398137 OR8D4Q8NGM9 314 aa22.34■■□□□ 1.17
U2AF1-203ENST00000398137 ZNF519Q8TB69 540 aa22.34■■□□□ 1.17
U2AF1-203ENST00000398137 RASD2Q96D21 266 aa22.34■■□□□ 1.17
U2AF1-203ENST00000398137 Q96M85 177 aa22.34■■□□□ 1.17
U2AF1-203ENST00000398137 ZNF570Q96NI8 536 aa22.34■■□□□ 1.17
U2AF1-203ENST00000398137 IFT27Q9BW83 186 aa22.34■■□□□ 1.17
U2AF1-203ENST00000398137 GABARAPL1Q9H0R8 117 aa22.34■■□□□ 1.17
U2AF1-203ENST00000398137 NRIP3Q9NQ35 241 aa22.34■■□□□ 1.17
U2AF1-203ENST00000398137 TBC1D23Q9NUY8 699 aa22.34■■□□□ 1.17
U2AF1-203ENST00000398137 IER3IP1Q9Y5U9 82 aa22.34■■□□□ 1.17
U2AF1-203ENST00000398137 RAI1Q7Z5J4 1906 aaPredicted RBP22.33■■□□□ 1.17
U2AF1-203ENST00000398137 TEX13CA0A0J9YWL9 993 aa22.33■■□□□ 1.17
U2AF1-203ENST00000398137 BAG2O95816 211 aa22.33■■□□□ 1.17
U2AF1-203ENST00000398137 ITGA5P08648 1049 aa22.33■■□□□ 1.17
U2AF1-203ENST00000398137 ACADSP16219 412 aa22.33■■□□□ 1.17
U2AF1-203ENST00000398137 CRYGSP22914 178 aa22.33■■□□□ 1.17
U2AF1-203ENST00000398137 RIPPLY3P57055 190 aa22.33■■□□□ 1.17
U2AF1-203ENST00000398137 CLRN1P58418 232 aa22.33■■□□□ 1.17
U2AF1-203ENST00000398137 ROR2Q01974 943 aaKnown RBP22.33■■□□□ 1.17
U2AF1-203ENST00000398137 P2RY6Q15077 328 aa22.33■■□□□ 1.17
U2AF1-203ENST00000398137 DEFB113Q30KQ7 82 aa22.33■■□□□ 1.17
U2AF1-203ENST00000398137 FAM205BPQ63HN1 556 aa22.33■■□□□ 1.17
U2AF1-203ENST00000398137 RPL13AP3Q6NVV1 102 aa22.33■■□□□ 1.17
U2AF1-203ENST00000398137 KRTAP1-3Q8IUG1 177 aa22.33■■□□□ 1.17
U2AF1-203ENST00000398137 CLDN22Q8N7P3 220 aa22.33■■□□□ 1.17
U2AF1-203ENST00000398137 HDAC2Q92769 488 aaKnown RBP22.33■■□□□ 1.17
U2AF1-203ENST00000398137 KISS1RQ969F8 398 aaPredicted RBP22.33■■□□□ 1.17
U2AF1-203ENST00000398137 STX18Q9P2W9 335 aaKnown RBP22.33■■□□□ 1.17
U2AF1-203ENST00000398137 GRHPRQ9UBQ7 328 aa22.33■■□□□ 1.17
U2AF1-203ENST00000398137 PRR14LQ5THK1 2151 aa22.32■■□□□ 1.16
U2AF1-203ENST00000398137 C16orf97H3BN30 126 aa22.32■■□□□ 1.16
U2AF1-203ENST00000398137 PDLIM1O00151 329 aa22.32■■□□□ 1.16
U2AF1-203ENST00000398137 TRMUO75648 421 aaKnown RBP22.32■■□□□ 1.16
U2AF1-203ENST00000398137 TP53P04637 393 aaPredicted RBP22.32■■□□□ 1.16
U2AF1-203ENST00000398137 PSMB1P20618 241 aaKnown RBP22.32■■□□□ 1.16
U2AF1-203ENST00000398137 IL32P24001 234 aa22.32■■□□□ 1.16
U2AF1-203ENST00000398137 ADAM8P78325 824 aa22.32■■□□□ 1.16
U2AF1-203ENST00000398137 ELF3P78545 371 aaPredicted RBP22.32■■□□□ 1.16
U2AF1-203ENST00000398137 COX10Q12887 443 aa22.32■■□□□ 1.16
U2AF1-203ENST00000398137 ITGADQ13349 1161 aa22.32■■□□□ 1.16
U2AF1-203ENST00000398137 KRR1Q13601 381 aaKnown RBP22.32■■□□□ 1.16
U2AF1-203ENST00000398137 RCN1Q15293 331 aa22.32■■□□□ 1.16
U2AF1-203ENST00000398137 SLC36A3Q495N2 470 aa22.32■■□□□ 1.16
U2AF1-203ENST00000398137 SFRP5Q5T4F7 317 aa22.32■■□□□ 1.16
U2AF1-203ENST00000398137 ABHD12BQ7Z5M8 362 aaPredicted RBP22.32■■□□□ 1.16
U2AF1-203ENST00000398137 ZNF433Q8N7K0 673 aaPredicted RBP22.32■■□□□ 1.16
U2AF1-203ENST00000398137 ARIH2OSQ8N7S6 290 aa22.32■■□□□ 1.16
U2AF1-203ENST00000398137 SYT14Q8NB59 555 aa22.32■■□□□ 1.16
U2AF1-203ENST00000398137 MAGEE2Q8TD90 523 aaPredicted RBP22.32■■□□□ 1.16
U2AF1-203ENST00000398137 TMEM54Q969K7 222 aa22.32■■□□□ 1.16
U2AF1-203ENST00000398137 LRR1Q96L50 414 aa22.32■■□□□ 1.16
U2AF1-203ENST00000398137 ERMAPQ96PL5 475 aaPredicted RBP22.32■■□□□ 1.16
U2AF1-203ENST00000398137 ULBP2Q9BZM5 246 aa22.32■■□□□ 1.16
U2AF1-203ENST00000398137 SMURF2Q9HAU4 748 aa22.32■■□□□ 1.16
U2AF1-203ENST00000398137 GPR35Q9HC97 309 aa22.32■■□□□ 1.16
U2AF1-203ENST00000398137 B3GAT2Q9NPZ5 323 aa22.32■■□□□ 1.16
U2AF1-203ENST00000398137 TAS2R16Q9NYV7 291 aa22.32■■□□□ 1.16
U2AF1-203ENST00000398137 IL20Q9NYY1 176 aa22.32■■□□□ 1.16
U2AF1-203ENST00000398137 REV1Q9UBZ9 1251 aa22.32■■□□□ 1.16
U2AF1-203ENST00000398137 ACANP16112 2415 aa22.32■■□□□ 1.16
U2AF1-203ENST00000398137 A6NIZ1 184 aa22.31■■□□□ 1.16
U2AF1-203ENST00000398137 H7C1C5 153 aa22.31■■□□□ 1.16
U2AF1-203ENST00000398137 SOCS2O14508 198 aa22.31■■□□□ 1.16
U2AF1-203ENST00000398137 CASKO14936 926 aa22.31■■□□□ 1.16
U2AF1-203ENST00000398137 THBDP07204 575 aa22.31■■□□□ 1.16
U2AF1-203ENST00000398137 CD99P14209 185 aa22.31■■□□□ 1.16
U2AF1-203ENST00000398137 CDH2P19022 906 aaPredicted RBP22.31■■□□□ 1.16
U2AF1-203ENST00000398137 SDHAP31040 664 aa22.31■■□□□ 1.16
U2AF1-203ENST00000398137 DAPP51397 102 aa22.31■■□□□ 1.16
U2AF1-203ENST00000398137 RPS6KA3P51812 740 aa22.31■■□□□ 1.16
U2AF1-203ENST00000398137 RAP1BP61224 184 aa22.31■■□□□ 1.16
U2AF1-203ENST00000398137 LCN6P62502 163 aa22.31■■□□□ 1.16
U2AF1-203ENST00000398137 RAP1AP62834 184 aa22.31■■□□□ 1.16
U2AF1-203ENST00000398137 MYBPC1Q00872 1141 aa22.31■■□□□ 1.16
U2AF1-203ENST00000398137 KEAP1Q14145 624 aa22.31■■□□□ 1.16
U2AF1-203ENST00000398137 MESTQ5EB52 335 aa22.31■■□□□ 1.16
U2AF1-203ENST00000398137 GPR139Q6DWJ6 353 aa22.31■■□□□ 1.16
U2AF1-203ENST00000398137 BHLHA15Q7RTS1 189 aaPredicted RBP22.31■■□□□ 1.16
U2AF1-203ENST00000398137 HS3ST6Q96QI5 342 aa22.31■■□□□ 1.16
U2AF1-203ENST00000398137 TSSK6Q9BXA6 273 aa22.31■■□□□ 1.16
U2AF1-203ENST00000398137 MRPL13Q9BYD1 178 aaKnown RBP22.31■■□□□ 1.16
U2AF1-203ENST00000398137 CRLF2Q9HC73 371 aa22.31■■□□□ 1.16
U2AF1-203ENST00000398137 DLL4Q9NR61 685 aa22.31■■□□□ 1.16
U2AF1-203ENST00000398137 PAPOLBQ9NRJ5 636 aaKnown RBP22.31■■□□□ 1.16
U2AF1-203ENST00000398137 GLTPQ9NZD2 209 aa22.31■■□□□ 1.16
U2AF1-203ENST00000398137 RAD51DO75771 328 aa22.3■■□□□ 1.16
U2AF1-203ENST00000398137 MPGP29372 298 aa22.3■■□□□ 1.16
U2AF1-203ENST00000398137 CD47Q08722 323 aa22.3■■□□□ 1.16
U2AF1-203ENST00000398137 CEACAM16Q2WEN9 425 aa22.3■■□□□ 1.16
U2AF1-203ENST00000398137 TEX47Q8TBZ9 253 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms