RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 ANKRD10Q9NXR5 420 aa21.5■■□□□ 1.03
PABPN1-202ENST00000397276 SPATA2Q9UM82 520 aa21.5■■□□□ 1.03
PABPN1-202ENST00000397276 TP53BP1Q12888 1972 aaPredicted RBP21.5■■□□□ 1.03
PABPN1-202ENST00000397276 TSPAN2O60636 221 aa21.5■■□□□ 1.03
PABPN1-202ENST00000397276 GLB1P16278 677 aa21.5■■□□□ 1.03
PABPN1-202ENST00000397276 SLC25A1P53007 311 aa21.5■■□□□ 1.03
PABPN1-202ENST00000397276 HSF2Q03933 536 aa21.5■■□□□ 1.03
PABPN1-202ENST00000397276 UNQ9370/PRO34162Q6UXP9 181 aa21.5■■□□□ 1.03
PABPN1-202ENST00000397276 LRRC69Q6ZNQ3 347 aa21.5■■□□□ 1.03
PABPN1-202ENST00000397276 OR1N1Q8NGS0 311 aa21.5■■□□□ 1.03
PABPN1-202ENST00000397276 DUSP19Q8WTR2 217 aa21.5■■□□□ 1.03
PABPN1-202ENST00000397276 PIGKQ92643 395 aa21.5■■□□□ 1.03
PABPN1-202ENST00000397276 OR2M2Q96R28 347 aa21.5■■□□□ 1.03
PABPN1-202ENST00000397276 METTL17Q9H7H0 456 aaPredicted RBP21.5■■□□□ 1.03
PABPN1-202ENST00000397276 SYNDIG1Q9H7V2 258 aa21.5■■□□□ 1.03
PABPN1-202ENST00000397276 C12orf10Q9HB07 376 aa21.5■■□□□ 1.03
PABPN1-202ENST00000397276 TAS2R5Q9NYW4 299 aa21.5■■□□□ 1.03
PABPN1-202ENST00000397276 UBQLN2Q9UHD9 624 aa21.5■■□□□ 1.03
PABPN1-202ENST00000397276 FRYLO94915 3013 aa21.5■■□□□ 1.03
PABPN1-202ENST00000397276 PCNX3Q9H6A9 2034 aa21.49■■□□□ 1.03
PABPN1-202ENST00000397276 UBL3O95164 117 aa21.49■■□□□ 1.03
PABPN1-202ENST00000397276 NXPE2Q96DL1 559 aa21.49■■□□□ 1.03
PABPN1-202ENST00000397276 CHIAQ9BZP6 476 aa21.49■■□□□ 1.03
PABPN1-202ENST00000397276 A0A1B0GX78 115 aa21.49■■□□□ 1.03
PABPN1-202ENST00000397276 TNRC18O15417 2968 aaPredicted RBP21.49■■□□□ 1.03
PABPN1-202ENST00000397276 GPRIN2O60269 458 aa21.49■■□□□ 1.03
PABPN1-202ENST00000397276 UPK3AO75631 287 aa21.49■■□□□ 1.03
PABPN1-202ENST00000397276 AFF3P51826 1226 aaKnown RBP21.49■■□□□ 1.03
PABPN1-202ENST00000397276 DMWDQ09019 674 aa21.49■■□□□ 1.03
PABPN1-202ENST00000397276 CLLU1Q5K131 121 aa21.49■■□□□ 1.03
PABPN1-202ENST00000397276 STPG1Q5TH74 334 aa21.49■■□□□ 1.03
PABPN1-202ENST00000397276 FCRLAQ7L513 359 aa21.49■■□□□ 1.03
PABPN1-202ENST00000397276 DNAAF1Q8NEP3 725 aa21.49■■□□□ 1.03
PABPN1-202ENST00000397276 OR2T4Q8NH00 348 aa21.49■■□□□ 1.03
PABPN1-202ENST00000397276 OR8K3Q8NH51 312 aa21.49■■□□□ 1.03
PABPN1-202ENST00000397276 OR5AK2Q8NH90 309 aa21.49■■□□□ 1.03
PABPN1-202ENST00000397276 ULBP3Q9BZM4 244 aa21.49■■□□□ 1.03
PABPN1-202ENST00000397276 OR11A1Q9GZK7 315 aa21.49■■□□□ 1.03
PABPN1-202ENST00000397276 ZCCHC4Q9H5U6 513 aa21.49■■□□□ 1.03
PABPN1-202ENST00000397276 FKRPQ9H9S5 495 aa21.49■■□□□ 1.03
PABPN1-202ENST00000397276 MOKQ9UQ07 419 aa21.49■■□□□ 1.03
PABPN1-202ENST00000397276 SLC6A5Q9Y345 797 aa21.49■■□□□ 1.03
PABPN1-202ENST00000397276 ZNF593O00488 134 aaPredicted RBP21.48■■□□□ 1.03
PABPN1-202ENST00000397276 RENP00797 406 aa21.48■■□□□ 1.03
PABPN1-202ENST00000397276 TACSTD2P09758 323 aa21.48■■□□□ 1.03
PABPN1-202ENST00000397276 H2AFB2P0C5Z0 115 aa21.48■■□□□ 1.03
PABPN1-202ENST00000397276 APEHP13798 732 aaKnown RBP21.48■■□□□ 1.03
PABPN1-202ENST00000397276 SLC6A8P48029 635 aa21.48■■□□□ 1.03
PABPN1-202ENST00000397276 SMAD2Q15796 467 aaKnown RBP21.48■■□□□ 1.03
PABPN1-202ENST00000397276 SFRP4Q6FHJ7 346 aaPredicted RBP21.48■■□□□ 1.03
PABPN1-202ENST00000397276 B3GNT4Q9C0J1 378 aa21.48■■□□□ 1.03
PABPN1-202ENST00000397276 MEIKINA0A087WXM9 373 aa21.48■■□□□ 1.03
PABPN1-202ENST00000397276 IFNA7P01567 189 aa21.48■■□□□ 1.03
PABPN1-202ENST00000397276 DCNP07585 359 aaKnown RBP21.48■■□□□ 1.03
PABPN1-202ENST00000397276 SULT1A3P0DMM9 295 aa21.48■■□□□ 1.03
PABPN1-202ENST00000397276 SULT1A4P0DMN0 295 aa21.48■■□□□ 1.03
PABPN1-202ENST00000397276 RRASP10301 218 aa21.48■■□□□ 1.03
PABPN1-202ENST00000397276 GP1BBP13224 206 aa21.48■■□□□ 1.03
PABPN1-202ENST00000397276 KDM8Q8N371 416 aa21.48■■□□□ 1.03
PABPN1-202ENST00000397276 FTMTQ8N4E7 242 aa21.48■■□□□ 1.03
PABPN1-202ENST00000397276 ZNF501Q96CX3 271 aaPredicted RBP21.48■■□□□ 1.03
PABPN1-202ENST00000397276 AMELYQ99218 206 aa21.48■■□□□ 1.03
PABPN1-202ENST00000397276 LIN7BQ9HAP6 207 aa21.48■■□□□ 1.03
PABPN1-202ENST00000397276 IFITM5A6NNB3 132 aa21.48■■□□□ 1.03
PABPN1-202ENST00000397276 ALG1L2C9J202 215 aa21.48■■□□□ 1.03
PABPN1-202ENST00000397276 BGLAPP02818 100 aa21.48■■□□□ 1.03
PABPN1-202ENST00000397276 GIMD1P0DJR0 217 aa21.48■■□□□ 1.03
PABPN1-202ENST00000397276 MAP2K6P52564 334 aa21.48■■□□□ 1.03
PABPN1-202ENST00000397276 DCAF7P61962 342 aa21.48■■□□□ 1.03
PABPN1-202ENST00000397276 ALKBH1Q13686 389 aaKnown RBP21.48■■□□□ 1.03
PABPN1-202ENST00000397276 SLC35D2Q76EJ3 337 aa21.48■■□□□ 1.03
PABPN1-202ENST00000397276 LINGO2Q7L985 606 aa21.48■■□□□ 1.03
PABPN1-202ENST00000397276 TMPRSS9Q7Z410 1059 aa21.48■■□□□ 1.03
PABPN1-202ENST00000397276 CDC20BQ86Y33 519 aa21.48■■□□□ 1.03
PABPN1-202ENST00000397276 OR10AC1Q8NH08 325 aa21.48■■□□□ 1.03
PABPN1-202ENST00000397276 METTL21AQ8WXB1 218 aa21.48■■□□□ 1.03
PABPN1-202ENST00000397276 PMEPA1Q969W9 287 aa21.48■■□□□ 1.03
PABPN1-202ENST00000397276 RDH8Q9NYR8 311 aa21.48■■□□□ 1.03
PABPN1-202ENST00000397276 PGCP20142 388 aa21.47■■□□□ 1.03
PABPN1-202ENST00000397276 OR51A4Q8NGJ6 313 aa21.47■■□□□ 1.03
PABPN1-202ENST00000397276 WDR89Q96FK6 387 aaPredicted RBP21.47■■□□□ 1.03
PABPN1-202ENST00000397276 SLC41A2Q96JW4 573 aa21.47■■□□□ 1.03
PABPN1-202ENST00000397276 KCNG2Q9UJ96 466 aa21.47■■□□□ 1.03
PABPN1-202ENST00000397276 PCDHGA9Q9Y5G4 932 aaKnown RBP21.47■■□□□ 1.03
PABPN1-202ENST00000397276 TRIOBPQ9H2D6 2365 aa21.47■■□□□ 1.03
PABPN1-202ENST00000397276 XKRYO14609 159 aa21.47■■□□□ 1.03
PABPN1-202ENST00000397276 SUSD5O60279 629 aa21.47■■□□□ 1.03
PABPN1-202ENST00000397276 RGS11O94810 467 aa21.47■■□□□ 1.03
PABPN1-202ENST00000397276 IGF2P01344 180 aa21.47■■□□□ 1.03
PABPN1-202ENST00000397276 PTHLHP12272 177 aa21.47■■□□□ 1.03
PABPN1-202ENST00000397276 MMP15P51511 669 aa21.47■■□□□ 1.03
PABPN1-202ENST00000397276 Q6ZTK2 550 aa21.47■■□□□ 1.03
PABPN1-202ENST00000397276 NLRC3Q7RTR2 1065 aa21.47■■□□□ 1.03
PABPN1-202ENST00000397276 NSMAFQ92636 917 aa21.47■■□□□ 1.03
PABPN1-202ENST00000397276 HGDQ93099 445 aa21.47■■□□□ 1.03
PABPN1-202ENST00000397276 ARID1BQ8NFD5 2236 aaPredicted RBP21.46■■□□□ 1.03
PABPN1-202ENST00000397276 TRAV36DV7A0A075B6V5 113 aa21.46■■□□□ 1.03
PABPN1-202ENST00000397276 TEX46H3BTG2 121 aa21.46■■□□□ 1.03
PABPN1-202ENST00000397276 RAD1O60671 282 aa21.46■■□□□ 1.03
PABPN1-202ENST00000397276 TXNDC12O95881 172 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms