RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 IMPDH2P12268 514 aa13.44□□□□□ -0.26
CBX3-202ENST00000396386 ATF1P18846 271 aa13.44□□□□□ -0.26
CBX3-202ENST00000396386 MAPK3P27361 379 aaPredicted RBP13.44□□□□□ -0.26
CBX3-202ENST00000396386 RPS27P42677 84 aaKnown RBP13.44□□□□□ -0.26
CBX3-202ENST00000396386 CD300CQ08708 224 aa13.44□□□□□ -0.26
CBX3-202ENST00000396386 MS4A18Q3C1V0 323 aa13.44□□□□□ -0.26
CBX3-202ENST00000396386 C3orf33Q6P1S2 294 aa13.44□□□□□ -0.26
CBX3-202ENST00000396386 AKAP14Q86UN6 197 aa13.44□□□□□ -0.26
CBX3-202ENST00000396386 IL17RDQ8NFM7 739 aa13.44□□□□□ -0.26
CBX3-202ENST00000396386 OR4K17Q8NGC6 315 aa13.44□□□□□ -0.26
CBX3-202ENST00000396386 POC1BQ8TC44 478 aa13.44□□□□□ -0.26
CBX3-202ENST00000396386 M1APQ8TC57 530 aa13.44□□□□□ -0.26
CBX3-202ENST00000396386 CHAC2Q8WUX2 184 aa13.44□□□□□ -0.26
CBX3-202ENST00000396386 NSMAFQ92636 917 aa13.44□□□□□ -0.26
CBX3-202ENST00000396386 MAP6Q96JE9 813 aa13.44□□□□□ -0.26
CBX3-202ENST00000396386 NEDD4LQ96PU5 975 aa13.44□□□□□ -0.26
CBX3-202ENST00000396386 CMKLR1Q99788 373 aa13.44□□□□□ -0.26
CBX3-202ENST00000396386 COMMD4Q9H0A8 199 aa13.44□□□□□ -0.26
CBX3-202ENST00000396386 TSPAN10Q9H1Z9 355 aaPredicted RBP13.44□□□□□ -0.26
CBX3-202ENST00000396386 ARRDC1-AS1Q9H2J1 176 aa13.44□□□□□ -0.26
CBX3-202ENST00000396386 ZCCHC4Q9H5U6 513 aa13.44□□□□□ -0.26
CBX3-202ENST00000396386 MUC6Q6W4X9 2439 aa13.44□□□□□ -0.26
CBX3-202ENST00000396386 A0A0G2JMP0 313 aa13.44□□□□□ -0.26
CBX3-202ENST00000396386 A0A0X1KG70 313 aa13.44□□□□□ -0.26
CBX3-202ENST00000396386 ZNF432O94892 652 aa13.44□□□□□ -0.26
CBX3-202ENST00000396386 PAHP00439 452 aa13.44□□□□□ -0.26
CBX3-202ENST00000396386 CELA2AP08217 269 aa13.44□□□□□ -0.26
CBX3-202ENST00000396386 SPARCP09486 303 aa13.44□□□□□ -0.26
CBX3-202ENST00000396386 HLA-DOBP13765 273 aa13.44□□□□□ -0.26
CBX3-202ENST00000396386 PLA2G5P39877 138 aa13.44□□□□□ -0.26
CBX3-202ENST00000396386 INPP1P49441 399 aa13.44□□□□□ -0.26
CBX3-202ENST00000396386 Q499Y3 187 aa13.44□□□□□ -0.26
CBX3-202ENST00000396386 CEP78Q5JTW2 689 aa13.44□□□□□ -0.26
CBX3-202ENST00000396386 SLC18B1Q6NT16 456 aa13.44□□□□□ -0.26
CBX3-202ENST00000396386 OPN5Q6U736 354 aa13.44□□□□□ -0.26
CBX3-202ENST00000396386 LRRC69Q6ZNQ3 347 aa13.44□□□□□ -0.26
CBX3-202ENST00000396386 RAB43Q86YS6 212 aa13.44□□□□□ -0.26
CBX3-202ENST00000396386 OR4M2Q8NGB6 313 aa13.44□□□□□ -0.26
CBX3-202ENST00000396386 RHBDD1Q8TEB9 315 aa13.44□□□□□ -0.26
CBX3-202ENST00000396386 FOXN4Q96NZ1 517 aa13.44□□□□□ -0.26
CBX3-202ENST00000396386 OR8B4Q96RC9 309 aa13.44□□□□□ -0.26
CBX3-202ENST00000396386 SLC25A18Q9H1K4 315 aa13.44□□□□□ -0.26
CBX3-202ENST00000396386 MRPL22Q9NWU5 206 aaKnown RBP13.44□□□□□ -0.26
CBX3-202ENST00000396386 FRRS1LQ9P0K9 344 aa13.44□□□□□ -0.26
CBX3-202ENST00000396386 CHCHD2Q9Y6H1 151 aaPredicted RBP13.44□□□□□ -0.26
CBX3-202ENST00000396386 RALGAPA1Q6GYQ0 2036 aa13.44□□□□□ -0.26
CBX3-202ENST00000396386 A0A1W2PNV4 684 aa13.43□□□□□ -0.26
CBX3-202ENST00000396386 TMEM212A6NML5 194 aa13.43□□□□□ -0.26
CBX3-202ENST00000396386 ZNF593O00488 134 aaPredicted RBP13.43□□□□□ -0.26
CBX3-202ENST00000396386 PIN1P1O15428 100 aa13.43□□□□□ -0.26
CBX3-202ENST00000396386 PLA2G10O15496 165 aa13.43□□□□□ -0.26
CBX3-202ENST00000396386 FZD7O75084 574 aa13.43□□□□□ -0.26
CBX3-202ENST00000396386 IFNGR1P15260 489 aa13.43□□□□□ -0.26
CBX3-202ENST00000396386 SRMP19623 302 aa13.43□□□□□ -0.26
CBX3-202ENST00000396386 MAP2K3P46734 347 aa13.43□□□□□ -0.26
CBX3-202ENST00000396386 OR2B6P58173 313 aa13.43□□□□□ -0.26
CBX3-202ENST00000396386 ADAM8P78325 824 aa13.43□□□□□ -0.26
CBX3-202ENST00000396386 HSF1Q00613 529 aa13.43□□□□□ -0.26
CBX3-202ENST00000396386 POU3F1Q03052 451 aaPredicted RBP13.43□□□□□ -0.26
CBX3-202ENST00000396386 GLO1Q04760 184 aa13.43□□□□□ -0.26
CBX3-202ENST00000396386 RASGEF1BQ0VAM2 473 aa13.43□□□□□ -0.26
CBX3-202ENST00000396386 SNTA1Q13424 505 aa13.43□□□□□ -0.26
CBX3-202ENST00000396386 MZT2BQ6NZ67 158 aa13.43□□□□□ -0.26
CBX3-202ENST00000396386 SLC35D2Q76EJ3 337 aa13.43□□□□□ -0.26
CBX3-202ENST00000396386 SYT9Q86SS6 491 aa13.43□□□□□ -0.26
CBX3-202ENST00000396386 KDM8Q8N371 416 aa13.43□□□□□ -0.26
CBX3-202ENST00000396386 FADS6Q8N9I5 356 aa13.43□□□□□ -0.26
CBX3-202ENST00000396386 OR2G2Q8NGZ5 317 aa13.43□□□□□ -0.26
CBX3-202ENST00000396386 ENKURQ8TC29 256 aa13.43□□□□□ -0.26
CBX3-202ENST00000396386 AMELYQ99218 206 aa13.43□□□□□ -0.26
CBX3-202ENST00000396386 SLITRK2Q9H156 845 aa13.43□□□□□ -0.26
CBX3-202ENST00000396386 SLCO1C1Q9NYB5 712 aa13.43□□□□□ -0.26
CBX3-202ENST00000396386 ING1Q9UK53 422 aaPredicted RBP13.43□□□□□ -0.26
CBX3-202ENST00000396386 FBXL2Q9UKC9 423 aa13.43□□□□□ -0.26
CBX3-202ENST00000396386 B3GALT5Q9Y2C3 310 aa13.43□□□□□ -0.26
CBX3-202ENST00000396386 AK6Q9Y3D8 172 aaKnown RBP13.43□□□□□ -0.26
CBX3-202ENST00000396386 TRBV5-5A0A0J9YX44 114 aa13.42□□□□□ -0.26
CBX3-202ENST00000396386 OR4C45A6NMZ5 311 aa13.42□□□□□ -0.26
CBX3-202ENST00000396386 CENPBD1B2RD01 187 aa13.42□□□□□ -0.26
CBX3-202ENST00000396386 ZNF254O75437 659 aa13.42□□□□□ -0.26
CBX3-202ENST00000396386 IGHEP01854 428 aa13.42□□□□□ -0.26
CBX3-202ENST00000396386 PRKAR1AP10644 381 aa13.42□□□□□ -0.26
CBX3-202ENST00000396386 SNRPBP14678 240 aaKnown RBP13.42□□□□□ -0.26
CBX3-202ENST00000396386 PITPNBP48739 271 aa13.42□□□□□ -0.26
CBX3-202ENST00000396386 EIF2B2P49770 351 aaKnown RBP13.42□□□□□ -0.26
CBX3-202ENST00000396386 MYBPHQ13203 477 aa13.42□□□□□ -0.26
CBX3-202ENST00000396386 DCAF12Q5T6F0 453 aa13.42□□□□□ -0.26
CBX3-202ENST00000396386 PRAMEF20Q5VT98 475 aa13.42□□□□□ -0.26
CBX3-202ENST00000396386 AGAP6Q5VW22 663 aa13.42□□□□□ -0.26
CBX3-202ENST00000396386 TMEM81Q6P7N7 255 aa13.42□□□□□ -0.26
CBX3-202ENST00000396386 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.42□□□□□ -0.26
CBX3-202ENST00000396386 ZNF676Q8N7Q3 588 aa13.42□□□□□ -0.26
CBX3-202ENST00000396386 ADPRHL1Q8NDY3 354 aa13.42□□□□□ -0.26
CBX3-202ENST00000396386 C4orf45Q96LM5 186 aa13.42□□□□□ -0.26
CBX3-202ENST00000396386 AGAP4Q96P64 663 aa13.42□□□□□ -0.26
CBX3-202ENST00000396386 KCNJ15Q99712 375 aa13.42□□□□□ -0.26
CBX3-202ENST00000396386 PTGES2Q9H7Z7 377 aa13.42□□□□□ -0.26
CBX3-202ENST00000396386 BRD7Q9NPI1 651 aa13.42□□□□□ -0.26
CBX3-202ENST00000396386 FANCFQ9NPI8 374 aa13.42□□□□□ -0.26
CBX3-202ENST00000396386 NPAP1Q9NZP6 1156 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms