RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 CYC1P08574 325 aa15.12■□□□□ 0.01
NUP50-202ENST00000396096 ADRA2CP18825 462 aa15.12■□□□□ 0.01
NUP50-202ENST00000396096 APOBEC1P41238 236 aaKnown RBP15.12■□□□□ 0.01
NUP50-202ENST00000396096 SRP9P49458 86 aaKnown RBP15.12■□□□□ 0.01
NUP50-202ENST00000396096 EMP2P54851 167 aa15.12■□□□□ 0.01
NUP50-202ENST00000396096 RAB25P57735 213 aa15.12■□□□□ 0.01
NUP50-202ENST00000396096 CD83Q01151 205 aa15.12■□□□□ 0.01
NUP50-202ENST00000396096 ROM1Q03395 351 aa15.12■□□□□ 0.01
NUP50-202ENST00000396096 KLF9Q13886 244 aaPredicted RBP15.12■□□□□ 0.01
NUP50-202ENST00000396096 SLC17A1Q14916 467 aa15.12■□□□□ 0.01
NUP50-202ENST00000396096 CDK10Q15131 360 aa15.12■□□□□ 0.01
NUP50-202ENST00000396096 PAPD4Q6PIY7 484 aaKnown RBP15.12■□□□□ 0.01
NUP50-202ENST00000396096 ESPNLQ6ZVH7 1005 aa15.12■□□□□ 0.01
NUP50-202ENST00000396096 KRT74Q7RTS7 529 aa15.12■□□□□ 0.01
NUP50-202ENST00000396096 ZNF433Q8N7K0 673 aaPredicted RBP15.12■□□□□ 0.01
NUP50-202ENST00000396096 OR5L2Q8NGL0 311 aa15.12■□□□□ 0.01
NUP50-202ENST00000396096 MFSD8Q8NHS3 518 aa15.12■□□□□ 0.01
NUP50-202ENST00000396096 GPR148Q8TDV2 347 aa15.12■□□□□ 0.01
NUP50-202ENST00000396096 DNAJA3Q96EY1 480 aa15.12■□□□□ 0.01
NUP50-202ENST00000396096 ZFP3Q96NJ6 502 aa15.12■□□□□ 0.01
NUP50-202ENST00000396096 MRPL22Q9NWU5 206 aaKnown RBP15.12■□□□□ 0.01
NUP50-202ENST00000396096 PILRBQ9UKJ0 227 aa15.12■□□□□ 0.01
NUP50-202ENST00000396096 ETV7Q9Y603 341 aa15.12■□□□□ 0.01
NUP50-202ENST00000396096 C7orf66A4D0T2 115 aa15.12■□□□□ 0.01
NUP50-202ENST00000396096 CENPBD1B2RD01 187 aa15.12■□□□□ 0.01
NUP50-202ENST00000396096 ZNF593O00488 134 aaPredicted RBP15.12■□□□□ 0.01
NUP50-202ENST00000396096 GPR171O14626 319 aa15.12■□□□□ 0.01
NUP50-202ENST00000396096 SULT1B1O43704 296 aa15.12■□□□□ 0.01
NUP50-202ENST00000396096 SLC16A7O60669 478 aa15.12■□□□□ 0.01
NUP50-202ENST00000396096 TPPPO94811 219 aa15.12■□□□□ 0.01
NUP50-202ENST00000396096 RAB40ALP0C0E4 278 aa15.12■□□□□ 0.01
NUP50-202ENST00000396096 GSTT2P0CG29 244 aa15.12■□□□□ 0.01
NUP50-202ENST00000396096 GSTT2BP0CG30 244 aa15.12■□□□□ 0.01
NUP50-202ENST00000396096 CFPP27918 469 aa15.12■□□□□ 0.01
NUP50-202ENST00000396096 MNDAP41218 407 aa15.12■□□□□ 0.01
NUP50-202ENST00000396096 KIR3DL2P43630 455 aa15.12■□□□□ 0.01
NUP50-202ENST00000396096 SCAND1P57086 179 aa15.12■□□□□ 0.01
NUP50-202ENST00000396096 MRPS15P82914 257 aaKnown RBP15.12■□□□□ 0.01
NUP50-202ENST00000396096 NDUFA5Q16718 116 aa15.12■□□□□ 0.01
NUP50-202ENST00000396096 SLC18B1Q6NT16 456 aa15.12■□□□□ 0.01
NUP50-202ENST00000396096 TSSK4Q6SA08 328 aa15.12■□□□□ 0.01
NUP50-202ENST00000396096 LRRN1Q6UXK5 716 aa15.12■□□□□ 0.01
NUP50-202ENST00000396096 EID2Q8N6I1 236 aa15.12■□□□□ 0.01
NUP50-202ENST00000396096 ZNF676Q8N7Q3 588 aa15.12■□□□□ 0.01
NUP50-202ENST00000396096 RAB40AQ8WXH6 277 aa15.12■□□□□ 0.01
NUP50-202ENST00000396096 AKAP1Q92667 903 aaKnown RBP eCLIP15.12■□□□□ 0.01
NUP50-202ENST00000396096 C8orf44Q96CB5 159 aa15.12■□□□□ 0.01
NUP50-202ENST00000396096 CCDC74BQ96LY2 380 aa15.12■□□□□ 0.01
NUP50-202ENST00000396096 MESP1Q9BRJ9 268 aa15.12■□□□□ 0.01
NUP50-202ENST00000396096 SLC26A1Q9H2B4 701 aa15.12■□□□□ 0.01
NUP50-202ENST00000396096 NIPAL2Q9H841 368 aa15.12■□□□□ 0.01
NUP50-202ENST00000396096 LIN7BQ9HAP6 207 aa15.12■□□□□ 0.01
NUP50-202ENST00000396096 OR5V1Q9UGF6 321 aa15.12■□□□□ 0.01
NUP50-202ENST00000396096 TRBV11-1A0A0K0K1C0 115 aa15.11■□□□□ 0.01
NUP50-202ENST00000396096 A0A1B0GTH9 108 aa15.11■□□□□ 0.01
NUP50-202ENST00000396096 A6NIZ1 184 aa15.11■□□□□ 0.01
NUP50-202ENST00000396096 AGRPO00253 132 aa15.11■□□□□ 0.01
NUP50-202ENST00000396096 ZNF208O43345 1280 aa15.11■□□□□ 0.01
NUP50-202ENST00000396096 DHFRP00374 187 aa15.11■□□□□ 0.01
NUP50-202ENST00000396096 ADRB1P08588 477 aa15.11■□□□□ 0.01
NUP50-202ENST00000396096 CTLA4P16410 223 aa15.11■□□□□ 0.01
NUP50-202ENST00000396096 CRABP1P29762 137 aa15.11■□□□□ 0.01
NUP50-202ENST00000396096 HOXD12P35452 270 aa15.11■□□□□ 0.01
NUP50-202ENST00000396096 RPS27P42677 84 aaKnown RBP15.11■□□□□ 0.01
NUP50-202ENST00000396096 RAG2P55895 527 aa15.11■□□□□ 0.01
NUP50-202ENST00000396096 RAP1BP61224 184 aa15.11■□□□□ 0.01
NUP50-202ENST00000396096 RAP1AP62834 184 aa15.11■□□□□ 0.01
NUP50-202ENST00000396096 TEX30Q5JUR7 227 aa15.11■□□□□ 0.01
NUP50-202ENST00000396096 SLC22A10Q63ZE4 541 aa15.11■□□□□ 0.01
NUP50-202ENST00000396096 TMEM205Q6UW68 189 aa15.11■□□□□ 0.01
NUP50-202ENST00000396096 FCRLAQ7L513 359 aa15.11■□□□□ 0.01
NUP50-202ENST00000396096 CPEB2Q7Z5Q1 589 aaKnown RBP15.11■□□□□ 0.01
NUP50-202ENST00000396096 WDR5BQ86VZ2 330 aa15.11■□□□□ 0.01
NUP50-202ENST00000396096 ZNF679Q8IYX0 411 aa15.11■□□□□ 0.01
NUP50-202ENST00000396096 RNF128Q8TEB7 428 aa15.11■□□□□ 0.01
NUP50-202ENST00000396096 NAT6Q93015 286 aa15.11■□□□□ 0.01
NUP50-202ENST00000396096 MCHR2Q969V1 340 aa15.11■□□□□ 0.01
NUP50-202ENST00000396096 SCMH1Q96GD3 660 aa15.11■□□□□ 0.01
NUP50-202ENST00000396096 CDX2Q99626 313 aaPredicted RBP15.11■□□□□ 0.01
NUP50-202ENST00000396096 ELOVL3Q9HB03 270 aa15.11■□□□□ 0.01
NUP50-202ENST00000396096 GALNT9Q9HCQ5 603 aa15.11■□□□□ 0.01
NUP50-202ENST00000396096 ING3Q9NXR8 418 aa15.11■□□□□ 0.01
NUP50-202ENST00000396096 MRPS7Q9Y2R9 242 aaKnown RBP15.11■□□□□ 0.01
NUP50-202ENST00000396096 PI4KAP42356 2102 aa15.11■□□□□ 0.01
NUP50-202ENST00000396096 IGLV3-32A0A0A0MS00 114 aa15.1■□□□□ 0.01
NUP50-202ENST00000396096 MS4A18H0YCH9 400 aa15.1■□□□□ 0.01
NUP50-202ENST00000396096 YKT6O15498 198 aa15.1■□□□□ 0.01
NUP50-202ENST00000396096 TCRBP04435 133 aa15.1■□□□□ 0.01
NUP50-202ENST00000396096 MSX1P28360 303 aa15.1■□□□□ 0.01
NUP50-202ENST00000396096 SOX2P48431 317 aa15.1■□□□□ 0.01
NUP50-202ENST00000396096 MAP2K6P52564 334 aa15.1■□□□□ 0.01
NUP50-202ENST00000396096 PUDPQ08623 228 aa15.1■□□□□ 0.01
NUP50-202ENST00000396096 MEP1BQ16820 701 aa15.1■□□□□ 0.01
NUP50-202ENST00000396096 HLA-BQ31612 363 aa15.1■□□□□ 0.01
NUP50-202ENST00000396096 MS4A18Q3C1V0 323 aa15.1■□□□□ 0.01
NUP50-202ENST00000396096 WDR38Q5JTN6 314 aa15.1■□□□□ 0.01
NUP50-202ENST00000396096 TMEM53Q6P2H8 277 aa15.1■□□□□ 0.01
NUP50-202ENST00000396096 LRRC69Q6ZNQ3 347 aa15.1■□□□□ 0.01
NUP50-202ENST00000396096 DND1Q8IYX4 353 aaKnown RBP15.1■□□□□ 0.01
NUP50-202ENST00000396096 ZNF454Q8N9F8 522 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms