RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 S100A11P31949 105 aa4.87□□□□□ -1.63
VPS41-203ENST00000395969 CCR6P51684 374 aa4.87□□□□□ -1.63
VPS41-203ENST00000395969 ZNF155Q12901 538 aaPredicted RBP4.87□□□□□ -1.63
VPS41-203ENST00000395969 DYRK1AQ13627 763 aa4.87□□□□□ -1.63
VPS41-203ENST00000395969 KLF9Q13886 244 aaPredicted RBP4.87□□□□□ -1.63
VPS41-203ENST00000395969 ULK3Q6PHR2 472 aa4.87□□□□□ -1.63
VPS41-203ENST00000395969 ZC3H14Q6PJT7 736 aaKnown RBP4.87□□□□□ -1.63
VPS41-203ENST00000395969 ALKAL2Q6UX46 152 aa4.87□□□□□ -1.63
VPS41-203ENST00000395969 Q6ZTK2 550 aa4.87□□□□□ -1.63
VPS41-203ENST00000395969 ATG4DQ86TL0 474 aaPredicted RBP4.87□□□□□ -1.63
VPS41-203ENST00000395969 TOMM5Q8N4H5 51 aa4.87□□□□□ -1.63
VPS41-203ENST00000395969 FAM98AQ8NCA5 519 aaKnown RBP4.87□□□□□ -1.63
VPS41-203ENST00000395969 SLC16A11Q8NCK7 471 aa4.87□□□□□ -1.63
VPS41-203ENST00000395969 OR1M1Q8NGA1 313 aa4.87□□□□□ -1.63
VPS41-203ENST00000395969 OR4K5Q8NGD3 323 aa4.87□□□□□ -1.63
VPS41-203ENST00000395969 PIGXQ8TBF5 258 aa4.87□□□□□ -1.63
VPS41-203ENST00000395969 STK35Q8TDR2 534 aa4.87□□□□□ -1.63
VPS41-203ENST00000395969 ADAMTS15Q8TE58 950 aa4.87□□□□□ -1.63
VPS41-203ENST00000395969 CDS1Q92903 461 aa4.87□□□□□ -1.63
VPS41-203ENST00000395969 ORAI1Q96D31 301 aa4.87□□□□□ -1.63
VPS41-203ENST00000395969 SLC41A3Q96GZ6 507 aa4.87□□□□□ -1.63
VPS41-203ENST00000395969 HS3ST6Q96QI5 342 aa4.87□□□□□ -1.63
VPS41-203ENST00000395969 C20orf85Q9H1P6 137 aa4.87□□□□□ -1.63
VPS41-203ENST00000395969 BARX1Q9HBU1 254 aaPredicted RBP4.87□□□□□ -1.63
VPS41-203ENST00000395969 PRTFDC1Q9NRG1 225 aa4.87□□□□□ -1.63
VPS41-203ENST00000395969 GSN-AS1Q9NRJ2 163 aa4.87□□□□□ -1.63
VPS41-203ENST00000395969 CMC2Q9NRP2 79 aa4.87□□□□□ -1.63
VPS41-203ENST00000395969 SEMA4GQ9NTN9 838 aa4.87□□□□□ -1.63
VPS41-203ENST00000395969 RHCGQ9UBD6 479 aa4.87□□□□□ -1.63
VPS41-203ENST00000395969 WDR45Q9Y484 360 aa4.87□□□□□ -1.63
VPS41-203ENST00000395969 NUMA1Q14980 2115 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 A0A1B0GUH1 482 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 TMEM82A0PJX8 343 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 METTL21EPA6NDL7 271 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 TRABD2BA6NFA1 517 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 A6NLC8 198 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 ZNF208O43345 1280 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 HCRTR1O43613 425 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 GSTZ1O43708 216 aaPredicted RBP4.86□□□□□ -1.63
VPS41-203ENST00000395969 EIF1BO60739 113 aaKnown RBP4.86□□□□□ -1.63
VPS41-203ENST00000395969 RP2O75695 350 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 AQP8O94778 261 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 MT-ATP6P00846 226 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 IGKV1D-16P01601 117 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 TFP02787 698 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 PPP3CBP16298 524 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 MSX1P28360 303 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 RFC3P40938 356 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 EIF1P41567 113 aaKnown RBP4.86□□□□□ -1.63
VPS41-203ENST00000395969 KCNJ3P48549 501 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 ARRB1P49407 418 aaPredicted RBP4.86□□□□□ -1.63
VPS41-203ENST00000395969 CSNK1EP49674 416 aaKnown RBP4.86□□□□□ -1.63
VPS41-203ENST00000395969 AKR1C2P52895 323 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 CASP6P55212 293 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 MAZP56270 477 aaKnown RBP4.86□□□□□ -1.63
VPS41-203ENST00000395969 DCDP81605 110 aaKnown RBP4.86□□□□□ -1.63
VPS41-203ENST00000395969 E2F1Q01094 437 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 AKR1C1Q04828 323 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 INSL4Q14641 139 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 RPS26P11Q5JNZ5 115 aaPredicted RBP4.86□□□□□ -1.63
VPS41-203ENST00000395969 ZNF684Q5T5D7 378 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 SLC22A10Q63ZE4 541 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 RBMS3Q6XE24 437 aaKnown RBP4.86□□□□□ -1.63
VPS41-203ENST00000395969 Q6ZSR3 168 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 OR11G2Q8NGC1 345 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 OR51Q1Q8NH59 317 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 TEX47Q8TBZ9 253 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 PIGKQ92643 395 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 KISS1RQ969F8 398 aaPredicted RBP4.86□□□□□ -1.63
VPS41-203ENST00000395969 RFKQ969G6 155 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 C16orf58Q96GQ5 468 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 LRR1Q96L50 414 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 MAP3K3Q99759 626 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 CMSS1Q9BQ75 279 aaKnown RBP4.86□□□□□ -1.63
VPS41-203ENST00000395969 WFDC6Q9BQY6 131 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 ADAT1Q9BUB4 502 aaKnown RBP4.86□□□□□ -1.63
VPS41-203ENST00000395969 RSRP1Q9BUV0 290 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 FNDC11Q9BVV2 318 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 CHRNA9Q9UGM1 479 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 GPN3Q9UHW5 284 aaPredicted RBP4.86□□□□□ -1.63
VPS41-203ENST00000395969 CLEC4AQ9UMR7 237 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 SIGLEC7Q9Y286 467 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 HIF3AQ9Y2N7 669 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 PCDHGA1Q9Y5H4 931 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 REV3LO60673 3130 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 SERINC4A6NH21 518 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 TXNL1O43396 289 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 DNAJB6O75190 326 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 ECDO95905 644 aaPredicted RBP4.86□□□□□ -1.63
VPS41-203ENST00000395969 ACAA1P09110 424 aaPredicted RBP4.86□□□□□ -1.63
VPS41-203ENST00000395969 ASAH2BP0C7U1 165 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 SMIM6P0DI80 62 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 TNFSF4P23510 183 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 SLC1A3P43003 542 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 SCAND1P57086 179 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 RAP2BP61225 183 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 GK2Q14410 553 aaPredicted RBP4.86□□□□□ -1.63
VPS41-203ENST00000395969 LASP1Q14847 261 aaKnown RBP4.86□□□□□ -1.63
VPS41-203ENST00000395969 ZNF124Q15973 351 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 PCK2Q16822 640 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms