RNA–Protein interactions for RNA: ENST00000395066.7

CLK3-202, Transcript of CDC like kinase 3, humanhuman

TSL 1 (best) BASIC

Gene CLK3, Length 2,621 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-202ENST00000395066 HAVCR1Q96D42 359 aa18.71■□□□□ 0.59
CLK3-202ENST00000395066 MMP25Q9NPA2 562 aa18.71■□□□□ 0.59
CLK3-202ENST00000395066 SLC22A23A1A5C7 686 aa18.71■□□□□ 0.59
CLK3-202ENST00000395066 ACOT7O00154 380 aa18.71■□□□□ 0.59
CLK3-202ENST00000395066 SEMA4FO95754 770 aa18.71■□□□□ 0.59
CLK3-202ENST00000395066 ABHD16AO95870 558 aa18.71■□□□□ 0.59
CLK3-202ENST00000395066 CTSEP14091 401 aa18.71■□□□□ 0.59
CLK3-202ENST00000395066 GUCA2AQ02747 115 aa18.71■□□□□ 0.59
CLK3-202ENST00000395066 KLHL26Q53HC5 615 aa18.71■□□□□ 0.59
CLK3-202ENST00000395066 B3GNTL1Q67FW5 361 aaPredicted RBP18.71■□□□□ 0.59
CLK3-202ENST00000395066 TMUB2Q71RG4 321 aa18.71■□□□□ 0.59
CLK3-202ENST00000395066 ATG4DQ86TL0 474 aaPredicted RBP18.71■□□□□ 0.59
CLK3-202ENST00000395066 LRRTM1Q86UE6 522 aa18.71■□□□□ 0.59
CLK3-202ENST00000395066 ZNF615Q8N8J6 731 aa18.71■□□□□ 0.59
CLK3-202ENST00000395066 LRRC75AQ8NAA5 344 aa18.71■□□□□ 0.59
CLK3-202ENST00000395066 TSPAN32Q96QS1 320 aa18.71■□□□□ 0.59
CLK3-202ENST00000395066 OR1F2PQ96R84 312 aa18.71■□□□□ 0.59
CLK3-202ENST00000395066 SYT4Q9H2B2 425 aa18.71■□□□□ 0.59
CLK3-202ENST00000395066 PIAS3Q9Y6X2 628 aa18.71■□□□□ 0.59
CLK3-202ENST00000395066 CDC14CA4D256 554 aa18.7■□□□□ 0.58
CLK3-202ENST00000395066 TOR1AO14656 332 aa18.7■□□□□ 0.58
CLK3-202ENST00000395066 CLPSP04118 112 aa18.7■□□□□ 0.58
CLK3-202ENST00000395066 IGHV4-34P06331 123 aa18.7■□□□□ 0.58
CLK3-202ENST00000395066 PRTGQ2VWP7 1150 aa18.7■□□□□ 0.58
CLK3-202ENST00000395066 C1QL3Q5VWW1 255 aa18.7■□□□□ 0.58
CLK3-202ENST00000395066 PPP1R14AQ96A00 147 aa18.7■□□□□ 0.58
CLK3-202ENST00000395066 TMEM106AQ96A25 262 aa18.7■□□□□ 0.58
CLK3-202ENST00000395066 TTYH1Q9H313 450 aaPredicted RBP18.7■□□□□ 0.58
CLK3-202ENST00000395066 LAMP5Q9UJQ1 280 aa18.7■□□□□ 0.58
CLK3-202ENST00000395066 LGALS8O00214 317 aa18.7■□□□□ 0.58
CLK3-202ENST00000395066 YPEL5P62699 121 aa18.7■□□□□ 0.58
CLK3-202ENST00000395066 ZNF273Q14593 569 aa18.7■□□□□ 0.58
CLK3-202ENST00000395066 C2orf68Q2NKX9 166 aa18.7■□□□□ 0.58
CLK3-202ENST00000395066 TFAP2EQ6VUC0 442 aa18.7■□□□□ 0.58
CLK3-202ENST00000395066 ZNF676Q8N7Q3 588 aa18.7■□□□□ 0.58
CLK3-202ENST00000395066 ZDHHC1Q8WTX9 485 aa18.7■□□□□ 0.58
CLK3-202ENST00000395066 PMEPA1Q969W9 287 aa18.7■□□□□ 0.58
CLK3-202ENST00000395066 MRPL48Q96GC5 212 aaKnown RBP18.7■□□□□ 0.58
CLK3-202ENST00000395066 GAL3ST1Q99999 423 aa18.7■□□□□ 0.58
CLK3-202ENST00000395066 NRSN2Q9GZP1 204 aa18.7■□□□□ 0.58
CLK3-202ENST00000395066 NKX2-4Q9H2Z4 354 aa18.7■□□□□ 0.58
CLK3-202ENST00000395066 GRHPRQ9UBQ7 328 aa18.7■□□□□ 0.58
CLK3-202ENST00000395066 HIF3AQ9Y2N7 669 aa18.7■□□□□ 0.58
CLK3-202ENST00000395066 ANXA2P2A6NMY6 339 aa18.7■□□□□ 0.58
CLK3-202ENST00000395066 C11orf98E9PRG8 122 aa18.7■□□□□ 0.58
CLK3-202ENST00000395066 PYCARD-AS1I3L0S3 204 aa18.7■□□□□ 0.58
CLK3-202ENST00000395066 PLGP00747 810 aaPredicted RBP18.7■□□□□ 0.58
CLK3-202ENST00000395066 ANXA2P07355 339 aaKnown RBP18.7■□□□□ 0.58
CLK3-202ENST00000395066 IL32P24001 234 aa18.7■□□□□ 0.58
CLK3-202ENST00000395066 SDHAP31040 664 aa18.7■□□□□ 0.58
CLK3-202ENST00000395066 SLC35D2Q76EJ3 337 aa18.7■□□□□ 0.58
CLK3-202ENST00000395066 PNPLA2Q96AD5 504 aa18.7■□□□□ 0.58
CLK3-202ENST00000395066 MIB2Q96AX9 1013 aa18.7■□□□□ 0.58
CLK3-202ENST00000395066 GINS4Q9BRT9 223 aa18.7■□□□□ 0.58
CLK3-202ENST00000395066 ARL6Q9H0F7 186 aa18.7■□□□□ 0.58
CLK3-202ENST00000395066 PNO1Q9NRX1 252 aaKnown RBP18.7■□□□□ 0.58
CLK3-202ENST00000395066 GLS2Q9UI32 602 aa18.7■□□□□ 0.58
CLK3-202ENST00000395066 KIR2DS5A0A0G2JLQ3 304 aa18.69■□□□□ 0.58
CLK3-202ENST00000395066 A0A0G2JNG1 304 aa18.69■□□□□ 0.58
CLK3-202ENST00000395066 HMSDA8MTL9 139 aa18.69■□□□□ 0.58
CLK3-202ENST00000395066 KIR2DS3K7RE56 304 aa18.69■□□□□ 0.58
CLK3-202ENST00000395066 TMEM127O75204 238 aa18.69■□□□□ 0.58
CLK3-202ENST00000395066 CALCBP10092 127 aa18.69■□□□□ 0.58
CLK3-202ENST00000395066 PPP3CBP16298 524 aa18.69■□□□□ 0.58
CLK3-202ENST00000395066 CALCRP30988 508 aa18.69■□□□□ 0.58
CLK3-202ENST00000395066 DLX5P56178 289 aa18.69■□□□□ 0.58
CLK3-202ENST00000395066 SKP2Q13309 424 aa18.69■□□□□ 0.58
CLK3-202ENST00000395066 IL10RAQ13651 578 aa18.69■□□□□ 0.58
CLK3-202ENST00000395066 FZD2Q14332 565 aa18.69■□□□□ 0.58
CLK3-202ENST00000395066 KIR2DS5Q14953 304 aa18.69■□□□□ 0.58
CLK3-202ENST00000395066 CSRP2Q16527 193 aa18.69■□□□□ 0.58
CLK3-202ENST00000395066 WBP2NLQ6ICG8 309 aa18.69■□□□□ 0.58
CLK3-202ENST00000395066 CFAP77Q6ZQR2 320 aa18.69■□□□□ 0.58
CLK3-202ENST00000395066 BIVMQ86UB2 503 aa18.69■□□□□ 0.58
CLK3-202ENST00000395066 PRSS35Q8N3Z0 413 aa18.69■□□□□ 0.58
CLK3-202ENST00000395066 NSMAFQ92636 917 aa18.69■□□□□ 0.58
CLK3-202ENST00000395066 CCDC74AQ96AQ1 378 aa18.69■□□□□ 0.58
CLK3-202ENST00000395066 GPX7Q96SL4 187 aaPredicted RBP18.69■□□□□ 0.58
CLK3-202ENST00000395066 MRI1Q9BV20 369 aa18.69■□□□□ 0.58
CLK3-202ENST00000395066 NXF5Q9H1B4 397 aaKnown RBP18.69■□□□□ 0.58
CLK3-202ENST00000395066 FBRSQ9HAH7 460 aa18.69■□□□□ 0.58
CLK3-202ENST00000395066 OPN4Q9UHM6 478 aa18.69■□□□□ 0.58
CLK3-202ENST00000395066 MRPS33Q9Y291 106 aaKnown RBP18.69■□□□□ 0.58
CLK3-202ENST00000395066 C17orf105B2RV13 164 aa18.69■□□□□ 0.58
CLK3-202ENST00000395066 CLDN4O14493 209 aa18.69■□□□□ 0.58
CLK3-202ENST00000395066 KDM4BO94953 1096 aa18.69■□□□□ 0.58
CLK3-202ENST00000395066 FGF2P09038 288 aa18.69■□□□□ 0.58
CLK3-202ENST00000395066 THEGLP0DJG4 465 aa18.69■□□□□ 0.58
CLK3-202ENST00000395066 VSIG10L2P0DP72 767 aa18.69■□□□□ 0.58
CLK3-202ENST00000395066 GABRA1P14867 456 aa18.69■□□□□ 0.58
CLK3-202ENST00000395066 FUT7Q11130 342 aa18.69■□□□□ 0.58
CLK3-202ENST00000395066 SHHQ15465 462 aa18.69■□□□□ 0.58
CLK3-202ENST00000395066 TOMM34Q15785 309 aaPredicted RBP18.69■□□□□ 0.58
CLK3-202ENST00000395066 PCGF3Q3KNV8 242 aa18.69■□□□□ 0.58
CLK3-202ENST00000395066 CDC20BQ86Y33 519 aa18.69■□□□□ 0.58
CLK3-202ENST00000395066 NAXDQ8IW45 347 aa18.69■□□□□ 0.58
CLK3-202ENST00000395066 PM20D2Q8IYS1 436 aa18.69■□□□□ 0.58
CLK3-202ENST00000395066 OR51D1Q8NGF3 324 aa18.69■□□□□ 0.58
CLK3-202ENST00000395066 OR5M1Q8NGP8 315 aa18.69■□□□□ 0.58
CLK3-202ENST00000395066 TAAR8Q969N4 342 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms