RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 OR1Q1Q15612 314 aa13.07□□□□□ -0.32
CHMP3-202ENST00000393773 SWT1Q5T5J6 900 aaKnown RBP13.07□□□□□ -0.32
CHMP3-202ENST00000393773 NXNQ6DKJ4 435 aa13.07□□□□□ -0.32
CHMP3-202ENST00000393773 USP51Q70EK9 711 aa13.07□□□□□ -0.32
CHMP3-202ENST00000393773 MIER2Q8N344 545 aa13.07□□□□□ -0.32
CHMP3-202ENST00000393773 MREGQ8N565 214 aa13.07□□□□□ -0.32
CHMP3-202ENST00000393773 OR5J2Q8NH18 312 aa13.07□□□□□ -0.32
CHMP3-202ENST00000393773 OR6X1Q8NH79 312 aa13.07□□□□□ -0.32
CHMP3-202ENST00000393773 NANPQ8TBE9 248 aa13.07□□□□□ -0.32
CHMP3-202ENST00000393773 SYNPRQ8TBG9 265 aa13.07□□□□□ -0.32
CHMP3-202ENST00000393773 DVL3Q92997 716 aaPredicted RBP13.07□□□□□ -0.32
CHMP3-202ENST00000393773 SH3GL3Q99963 347 aa13.07□□□□□ -0.32
CHMP3-202ENST00000393773 GPR160Q9UJ42 338 aa13.07□□□□□ -0.32
CHMP3-202ENST00000393773 SLC22A23A1A5C7 686 aa13.06□□□□□ -0.32
CHMP3-202ENST00000393773 MFN2O95140 757 aa13.06□□□□□ -0.32
CHMP3-202ENST00000393773 BCL10O95999 233 aa13.06□□□□□ -0.32
CHMP3-202ENST00000393773 MT-ATP6P00846 226 aa13.06□□□□□ -0.32
CHMP3-202ENST00000393773 OR8G3PP0DMU2 310 aa13.06□□□□□ -0.32
CHMP3-202ENST00000393773 HKR1P10072 659 aa13.06□□□□□ -0.32
CHMP3-202ENST00000393773 KITP10721 976 aa13.06□□□□□ -0.32
CHMP3-202ENST00000393773 AHCYP23526 432 aa13.06□□□□□ -0.32
CHMP3-202ENST00000393773 GATA3P23771 443 aa13.06□□□□□ -0.32
CHMP3-202ENST00000393773 CDH12P55289 794 aa13.06□□□□□ -0.32
CHMP3-202ENST00000393773 GLO1Q04760 184 aa13.06□□□□□ -0.32
CHMP3-202ENST00000393773 TMEM255AQ5JRV8 349 aa13.06□□□□□ -0.32
CHMP3-202ENST00000393773 GCNT6Q5T4J0 391 aa13.06□□□□□ -0.32
CHMP3-202ENST00000393773 REEP3Q6NUK4 255 aa13.06□□□□□ -0.32
CHMP3-202ENST00000393773 SHISA2Q6UWI4 295 aa13.06□□□□□ -0.32
CHMP3-202ENST00000393773 ZNF519Q8TB69 540 aa13.06□□□□□ -0.32
CHMP3-202ENST00000393773 C22orf15Q8WYQ4 148 aa13.06□□□□□ -0.32
CHMP3-202ENST00000393773 OR52B2Q96RD2 323 aa13.06□□□□□ -0.32
CHMP3-202ENST00000393773 C1orf198Q9H425 327 aa13.06□□□□□ -0.32
CHMP3-202ENST00000393773 SAP30LQ9HAJ7 183 aa13.06□□□□□ -0.32
CHMP3-202ENST00000393773 CDH20Q9HBT6 801 aa13.06□□□□□ -0.32
CHMP3-202ENST00000393773 THAP1Q9NVV9 213 aa13.06□□□□□ -0.32
CHMP3-202ENST00000393773 SLCO1C1Q9NYB5 712 aa13.06□□□□□ -0.32
CHMP3-202ENST00000393773 PPIAL4AQ9Y536 164 aa13.06□□□□□ -0.32
CHMP3-202ENST00000393773 NOTCH1P46531 2555 aa13.06□□□□□ -0.32
CHMP3-202ENST00000393773 C11orf98E9PRG8 122 aa13.05□□□□□ -0.32
CHMP3-202ENST00000393773 LCKP06239 509 aa13.05□□□□□ -0.32
CHMP3-202ENST00000393773 PGA4P0DJD7 388 aa13.05□□□□□ -0.32
CHMP3-202ENST00000393773 PGA3P0DJD8 388 aa13.05□□□□□ -0.32
CHMP3-202ENST00000393773 ADORA3P0DMS8 318 aa13.05□□□□□ -0.32
CHMP3-202ENST00000393773 WDR4P57081 412 aaKnown RBP13.05□□□□□ -0.32
CHMP3-202ENST00000393773 TEKQ02763 1124 aa13.05□□□□□ -0.32
CHMP3-202ENST00000393773 MELKQ14680 651 aa13.05□□□□□ -0.32
CHMP3-202ENST00000393773 PDLIM3Q53GG5 364 aaPredicted RBP13.05□□□□□ -0.32
CHMP3-202ENST00000393773 LRIF1Q5T3J3 769 aa13.05□□□□□ -0.32
CHMP3-202ENST00000393773 LRFN4Q6PJG9 635 aa13.05□□□□□ -0.32
CHMP3-202ENST00000393773 SLC35D2Q76EJ3 337 aa13.05□□□□□ -0.32
CHMP3-202ENST00000393773 C10orf53Q8N6V4 93 aa13.05□□□□□ -0.32
CHMP3-202ENST00000393773 GOLGA6L1Q8N7Z2 621 aa13.05□□□□□ -0.32
CHMP3-202ENST00000393773 OR4K5Q8NGD3 323 aa13.05□□□□□ -0.32
CHMP3-202ENST00000393773 PAIP2Q9BPZ3 127 aaKnown RBP13.05□□□□□ -0.32
CHMP3-202ENST00000393773 SPATA5L1Q9BVQ7 753 aa13.05□□□□□ -0.32
CHMP3-202ENST00000393773 TMEM27Q9HBJ8 222 aa13.05□□□□□ -0.32
CHMP3-202ENST00000393773 SELENONQ9NZV5 590 aa13.05□□□□□ -0.32
CHMP3-202ENST00000393773 DHHO43323 396 aa13.04□□□□□ -0.32
CHMP3-202ENST00000393773 ENTPD5O75356 428 aa13.04□□□□□ -0.32
CHMP3-202ENST00000393773 IGHV3-13P01766 116 aa13.04□□□□□ -0.32
CHMP3-202ENST00000393773 MAKP20794 623 aa13.04□□□□□ -0.32
CHMP3-202ENST00000393773 RAD52P43351 418 aa13.04□□□□□ -0.32
CHMP3-202ENST00000393773 SELENOVP59797 346 aa13.04□□□□□ -0.32
CHMP3-202ENST00000393773 CDK6Q00534 326 aa13.04□□□□□ -0.32
CHMP3-202ENST00000393773 FOXL1Q12952 345 aa13.04□□□□□ -0.32
CHMP3-202ENST00000393773 TBC1D28Q2M2D7 210 aa13.04□□□□□ -0.32
CHMP3-202ENST00000393773 TMEM53Q6P2H8 277 aa13.04□□□□□ -0.32
CHMP3-202ENST00000393773 LINC00114Q6XXX2 140 aa13.04□□□□□ -0.32
CHMP3-202ENST00000393773 RANBP3LQ86VV4 465 aaPredicted RBP13.04□□□□□ -0.32
CHMP3-202ENST00000393773 KRT73Q86Y46 540 aa13.04□□□□□ -0.32
CHMP3-202ENST00000393773 C11orf40Q8WZ69 217 aa13.04□□□□□ -0.32
CHMP3-202ENST00000393773 ZNF566Q969W8 418 aa13.04□□□□□ -0.32
CHMP3-202ENST00000393773 LRRC58Q96CX6 371 aa13.04□□□□□ -0.32
CHMP3-202ENST00000393773 SLC25A44Q96H78 314 aaPredicted RBP13.04□□□□□ -0.32
CHMP3-202ENST00000393773 C1orf147Q96MC9 270 aaPredicted RBP13.04□□□□□ -0.32
CHMP3-202ENST00000393773 GAL3ST1Q99999 423 aa13.04□□□□□ -0.32
CHMP3-202ENST00000393773 BCL2L14Q9BZR8 327 aa13.04□□□□□ -0.32
CHMP3-202ENST00000393773 IKZF5Q9H5V7 419 aa13.04□□□□□ -0.32
CHMP3-202ENST00000393773 C7orf69Q9H7B7 122 aa13.04□□□□□ -0.32
CHMP3-202ENST00000393773 NTN4Q9HB63 628 aa13.04□□□□□ -0.32
CHMP3-202ENST00000393773 KCNK9Q9NPC2 374 aa13.04□□□□□ -0.32
CHMP3-202ENST00000393773 TAS2R5Q9NYW4 299 aa13.04□□□□□ -0.32
CHMP3-202ENST00000393773 TRIM33Q9UPN9 1127 aa13.04□□□□□ -0.32
CHMP3-202ENST00000393773 GMEB1Q9Y692 573 aa13.04□□□□□ -0.32
CHMP3-202ENST00000393773 TRBV5-3A0A0A0MS03 114 aa13.03□□□□□ -0.32
CHMP3-202ENST00000393773 DNAJC9-AS1A6NH13 148 aa13.03□□□□□ -0.32
CHMP3-202ENST00000393773 UBDO15205 165 aa13.03□□□□□ -0.32
CHMP3-202ENST00000393773 CHP2O43745 196 aa13.03□□□□□ -0.32
CHMP3-202ENST00000393773 LYPD3O95274 346 aa13.03□□□□□ -0.32
CHMP3-202ENST00000393773 FARS2O95363 451 aaKnown RBP13.03□□□□□ -0.32
CHMP3-202ENST00000393773 IGHV1-46P01743 117 aa13.03□□□□□ -0.32
CHMP3-202ENST00000393773 MMP7P09237 267 aaPredicted RBP13.03□□□□□ -0.32
CHMP3-202ENST00000393773 MMP15P51511 669 aa13.03□□□□□ -0.32
CHMP3-202ENST00000393773 UCP2P55851 309 aa13.03□□□□□ -0.32
CHMP3-202ENST00000393773 LCN2P80188 198 aa13.03□□□□□ -0.32
CHMP3-202ENST00000393773 ZNF74Q16587 644 aa13.03□□□□□ -0.32
CHMP3-202ENST00000393773 HIST3H3Q16695 136 aa13.03□□□□□ -0.32
CHMP3-202ENST00000393773 TSTQ16762 297 aaKnown RBP13.03□□□□□ -0.32
CHMP3-202ENST00000393773 HFEQ30201 348 aa13.03□□□□□ -0.32
CHMP3-202ENST00000393773 SLC36A2Q495M3 483 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms