RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 M0R036 132 aa15.14■□□□□ 0.01
SCN3B-202ENST00000392770 PRKACBP22694 351 aa15.14■□□□□ 0.01
SCN3B-202ENST00000392770 NXPH1P58417 271 aa15.14■□□□□ 0.01
SCN3B-202ENST00000392770 MZT1Q08AG7 82 aa15.14■□□□□ 0.01
SCN3B-202ENST00000392770 MPEG1Q2M385 716 aa15.14■□□□□ 0.01
SCN3B-202ENST00000392770 STEAP3Q658P3 488 aa15.14■□□□□ 0.01
SCN3B-202ENST00000392770 MKXQ8IYA7 352 aa15.14■□□□□ 0.01
SCN3B-202ENST00000392770 OR9K2Q8NGE7 335 aa15.14■□□□□ 0.01
SCN3B-202ENST00000392770 OR2T35Q8NGX2 323 aa15.14■□□□□ 0.01
SCN3B-202ENST00000392770 MIB2Q96AX9 1013 aa15.14■□□□□ 0.01
SCN3B-202ENST00000392770 SGCZQ96LD1 299 aa15.14■□□□□ 0.01
SCN3B-202ENST00000392770 FOLR1P15328 257 aa15.14■□□□□ 0.01
SCN3B-202ENST00000392770 EPHA2P29317 976 aa15.14■□□□□ 0.01
SCN3B-202ENST00000392770 GRB2P62993 217 aaKnown RBP15.14■□□□□ 0.01
SCN3B-202ENST00000392770 NCCRP1Q6ZVX7 275 aaPredicted RBP15.14■□□□□ 0.01
SCN3B-202ENST00000392770 ZNF695Q8IW36 515 aa15.14■□□□□ 0.01
SCN3B-202ENST00000392770 ST8SIA1Q92185 356 aa15.14■□□□□ 0.01
SCN3B-202ENST00000392770 EDEM2Q9BV94 578 aa15.14■□□□□ 0.01
SCN3B-202ENST00000392770 GALNT9Q9HCQ5 603 aa15.14■□□□□ 0.01
SCN3B-202ENST00000392770 TMEM9BQ9NQ34 198 aa15.14■□□□□ 0.01
SCN3B-202ENST00000392770 KIAA0100Q14667 2235 aaKnown RBP15.14■□□□□ 0.01
SCN3B-202ENST00000392770 IFNA5P01569 189 aa15.14■□□□□ 0.01
SCN3B-202ENST00000392770 CXADRP78310 365 aa15.14■□□□□ 0.01
SCN3B-202ENST00000392770 ZIC1Q15915 447 aa15.14■□□□□ 0.01
SCN3B-202ENST00000392770 EXOSC6Q5RKV6 272 aaKnown RBP15.14■□□□□ 0.01
SCN3B-202ENST00000392770 GPATCH2Q9NW75 528 aa15.14■□□□□ 0.01
SCN3B-202ENST00000392770 ZNF223Q9UK11 482 aaPredicted RBP15.14■□□□□ 0.01
SCN3B-202ENST00000392770 YARS2Q9Y2Z4 477 aaKnown RBP15.14■□□□□ 0.01
SCN3B-202ENST00000392770 TNFSF15O95150 251 aa15.14■□□□□ 0.01
SCN3B-202ENST00000392770 RELAQ04206 551 aa15.14■□□□□ 0.01
SCN3B-202ENST00000392770 KIRREL2Q6UWL6 708 aa15.14■□□□□ 0.01
SCN3B-202ENST00000392770 DNAAF1Q8NEP3 725 aa15.14■□□□□ 0.01
SCN3B-202ENST00000392770 TNFRSF10AO00220 468 aa15.13■□□□□ 0.01
SCN3B-202ENST00000392770 CX3CR1P49238 355 aa15.13■□□□□ 0.01
SCN3B-202ENST00000392770 DRAXINQ8NBI3 349 aaPredicted RBP15.13■□□□□ 0.01
SCN3B-202ENST00000392770 OR4M1Q8NGD0 313 aa15.13■□□□□ 0.01
SCN3B-202ENST00000392770 SLC19A3Q9BZV2 496 aa15.13■□□□□ 0.01
SCN3B-202ENST00000392770 NIPAL2Q9H841 368 aa15.13■□□□□ 0.01
SCN3B-202ENST00000392770 EMC7Q9NPA0 242 aa15.13■□□□□ 0.01
SCN3B-202ENST00000392770 LSM5Q9Y4Y9 91 aaKnown RBP15.13■□□□□ 0.01
SCN3B-202ENST00000392770 EPHA1P21709 976 aa15.13■□□□□ 0.01
SCN3B-202ENST00000392770 CMTM1Q8IZ96 169 aa15.13■□□□□ 0.01
SCN3B-202ENST00000392770 SPAG16Q8N0X2 631 aa15.13■□□□□ 0.01
SCN3B-202ENST00000392770 ZADH2Q8N4Q0 377 aa15.13■□□□□ 0.01
SCN3B-202ENST00000392770 OR5D18Q8NGL1 313 aa15.13■□□□□ 0.01
SCN3B-202ENST00000392770 SMCO3A2RU48 225 aa15.13■□□□□ 0.01
SCN3B-202ENST00000392770 PAHP00439 452 aa15.13■□□□□ 0.01
SCN3B-202ENST00000392770 ITGB2P05107 769 aa15.13■□□□□ 0.01
SCN3B-202ENST00000392770 PRICKLE4Q2TBC4 344 aa15.13■□□□□ 0.01
SCN3B-202ENST00000392770 SOWAHCQ53LP3 525 aaPredicted RBP15.13■□□□□ 0.01
SCN3B-202ENST00000392770 PGAP1Q75T13 922 aa15.13■□□□□ 0.01
SCN3B-202ENST00000392770 PHC2Q8IXK0 858 aa15.13■□□□□ 0.01
SCN3B-202ENST00000392770 PLPP7Q8NBV4 271 aa15.13■□□□□ 0.01
SCN3B-202ENST00000392770 SLC25A46Q96AG3 418 aa15.13■□□□□ 0.01
SCN3B-202ENST00000392770 PLSCR5A0PG75 271 aa15.13■□□□□ 0.01
SCN3B-202ENST00000392770 GDNFP39905 211 aa15.13■□□□□ 0.01
SCN3B-202ENST00000392770 GPR176Q14439 515 aa15.13■□□□□ 0.01
SCN3B-202ENST00000392770 MAML2Q8IZL2 1156 aaPredicted RBP15.13■□□□□ 0.01
SCN3B-202ENST00000392770 OR1N1Q8NGS0 311 aa15.13■□□□□ 0.01
SCN3B-202ENST00000392770 SMAP2Q8WU79 429 aaPredicted RBP15.13■□□□□ 0.01
SCN3B-202ENST00000392770 GIMAP1Q8WWP7 306 aa15.13■□□□□ 0.01
SCN3B-202ENST00000392770 MICU1Q9BPX6 476 aa15.13■□□□□ 0.01
SCN3B-202ENST00000392770 IGHV1OR21-1A0A087WYE8 117 aa15.13■□□□□ 0.01
SCN3B-202ENST00000392770 ZNF44P15621 663 aa15.13■□□□□ 0.01
SCN3B-202ENST00000392770 TNFSF4P23510 183 aa15.13■□□□□ 0.01
SCN3B-202ENST00000392770 RBPJQ06330 500 aa15.13■□□□□ 0.01
SCN3B-202ENST00000392770 SELENBP1Q13228 472 aa15.13■□□□□ 0.01
SCN3B-202ENST00000392770 FAM198BQ6UWH4 519 aa15.13■□□□□ 0.01
SCN3B-202ENST00000392770 NRARPQ7Z6K4 114 aa15.13■□□□□ 0.01
SCN3B-202ENST00000392770 NOXA1Q86UR1 476 aa15.13■□□□□ 0.01
SCN3B-202ENST00000392770 DCUN1D4Q92564 292 aa15.13■□□□□ 0.01
SCN3B-202ENST00000392770 ARL5BQ96KC2 179 aa15.13■□□□□ 0.01
SCN3B-202ENST00000392770 TMEM59Q9BXS4 323 aa15.13■□□□□ 0.01
SCN3B-202ENST00000392770 TAS2R3Q9NYW6 316 aa15.13■□□□□ 0.01
SCN3B-202ENST00000392770 ETV7Q9Y603 341 aa15.13■□□□□ 0.01
SCN3B-202ENST00000392770 APEX1P27695 318 aaKnown RBP15.12■□□□□ 0.01
SCN3B-202ENST00000392770 TATDN3Q17R31 274 aa15.12■□□□□ 0.01
SCN3B-202ENST00000392770 VN1R4Q7Z5H5 301 aa15.12■□□□□ 0.01
SCN3B-202ENST00000392770 SLC22A24Q8N4F4 322 aa15.12■□□□□ 0.01
SCN3B-202ENST00000392770 GJC3Q8NFK1 279 aa15.12■□□□□ 0.01
SCN3B-202ENST00000392770 OR56B1Q8NGI3 324 aa15.12■□□□□ 0.01
SCN3B-202ENST00000392770 PIGBOS1A0A0B4J2F0 54 aa15.12■□□□□ 0.01
SCN3B-202ENST00000392770 SOD1P00441 154 aa15.12■□□□□ 0.01
SCN3B-202ENST00000392770 SEC61A1P61619 476 aaKnown RBP15.12■□□□□ 0.01
SCN3B-202ENST00000392770 Q7L0L9 218 aa15.12■□□□□ 0.01
SCN3B-202ENST00000392770 BPIFB2Q8N4F0 458 aa15.12■□□□□ 0.01
SCN3B-202ENST00000392770 SNIP1Q8TAD8 396 aaKnown RBP15.12■□□□□ 0.01
SCN3B-202ENST00000392770 RRNAD1Q96FB5 475 aaKnown RBP15.12■□□□□ 0.01
SCN3B-202ENST00000392770 DUSP21Q9H596 190 aa15.12■□□□□ 0.01
SCN3B-202ENST00000392770 SLAMF7Q9NQ25 335 aa15.12■□□□□ 0.01
SCN3B-202ENST00000392770 EHFQ9NZC4 300 aa15.12■□□□□ 0.01
SCN3B-202ENST00000392770 GPX5O75715 221 aa15.12■□□□□ 0.01
SCN3B-202ENST00000392770 IGHV3-9P01782 118 aa15.12■□□□□ 0.01
SCN3B-202ENST00000392770 WDR88Q6ZMY6 472 aa15.12■□□□□ 0.01
SCN3B-202ENST00000392770 ARPC5O15511 151 aa15.12■□□□□ 0.01
SCN3B-202ENST00000392770 ATG12O94817 140 aa15.12■□□□□ 0.01
SCN3B-202ENST00000392770 BPNT1O95861 308 aa15.12■□□□□ 0.01
SCN3B-202ENST00000392770 ALDOBP05062 364 aa15.12■□□□□ 0.01
SCN3B-202ENST00000392770 HTR2BP41595 481 aa15.12■□□□□ 0.01
SCN3B-202ENST00000392770 DIO1P49895 249 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms