RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 HDGFL3Q9Y3E1 203 aa3.13□□□□□ -1.91
TRAV39-201ENST00000390466 PRKAB1Q9Y478 270 aa3.13□□□□□ -1.91
TRAV39-201ENST00000390466 PCDHGA1Q9Y5H4 931 aa3.13□□□□□ -1.91
TRAV39-201ENST00000390466 ENTPD2Q9Y5L3 495 aa3.13□□□□□ -1.91
TRAV39-201ENST00000390466 DMRT1Q9Y5R6 373 aa3.13□□□□□ -1.91
TRAV39-201ENST00000390466 TDRD6O60522 2096 aaKnown RBP3.13□□□□□ -1.91
TRAV39-201ENST00000390466 ADAMTS20P59510 1910 aa3.13□□□□□ -1.91
TRAV39-201ENST00000390466 EML6Q6ZMW3 1958 aa3.12□□□□□ -1.91
TRAV39-201ENST00000390466 MYO9BQ13459 2157 aa3.12□□□□□ -1.91
TRAV39-201ENST00000390466 IGKV1D-42A0A075B6H8 117 aa3.12□□□□□ -1.91
TRAV39-201ENST00000390466 TBC1D3DA0A087WVF3 549 aa3.12□□□□□ -1.91
TRAV39-201ENST00000390466 TBC1D3IA0A087WXS9 549 aa3.12□□□□□ -1.91
TRAV39-201ENST00000390466 A0A0A6YYC8 382 aaPredicted RBP3.12□□□□□ -1.91
TRAV39-201ENST00000390466 NPIPA5A0A0B4J1W7 369 aa3.12□□□□□ -1.91
TRAV39-201ENST00000390466 TRBV2A0A0J9YWF9 115 aa3.12□□□□□ -1.91
TRAV39-201ENST00000390466 A0A1B0GTH9 108 aa3.12□□□□□ -1.91
TRAV39-201ENST00000390466 A0A1B0GWA3 101 aa3.12□□□□□ -1.91
TRAV39-201ENST00000390466 A0A1W2PPC1 479 aa3.12□□□□□ -1.91
TRAV39-201ENST00000390466 LOC390937A0A1W2PQ73 354 aa3.12□□□□□ -1.91
TRAV39-201ENST00000390466 KANTRA0A1W2PQU2 76 aa3.12□□□□□ -1.91
TRAV39-201ENST00000390466 FAM86C2PA6NEL3 165 aa3.12□□□□□ -1.91
TRAV39-201ENST00000390466 TBC1D3FA6NER0 549 aaPredicted RBP3.12□□□□□ -1.91
TRAV39-201ENST00000390466 GLOD5A6NK44 160 aa3.12□□□□□ -1.91
TRAV39-201ENST00000390466 C4orf47A7E2U8 309 aa3.12□□□□□ -1.91
TRAV39-201ENST00000390466 TBC1D3LB9A6J9 549 aa3.12□□□□□ -1.91
TRAV39-201ENST00000390466 MCIDASD6RGH6 385 aa3.12□□□□□ -1.91
TRAV39-201ENST00000390466 NPIPA7E9PJI5 369 aa3.12□□□□□ -1.91
TRAV39-201ENST00000390466 I3L1I5 382 aaPredicted RBP3.12□□□□□ -1.91
TRAV39-201ENST00000390466 K7EQS6 105 aa3.12□□□□□ -1.91
TRAV39-201ENST00000390466 MFNGO00587 321 aa3.12□□□□□ -1.91
TRAV39-201ENST00000390466 SLC17A2O00624 439 aa3.12□□□□□ -1.91
TRAV39-201ENST00000390466 CCSO14618 274 aa3.12□□□□□ -1.91
TRAV39-201ENST00000390466 SSX5O60225 188 aa3.12□□□□□ -1.91
TRAV39-201ENST00000390466 ZNF217O75362 1048 aa3.12□□□□□ -1.91
TRAV39-201ENST00000390466 SRSF10O75494 262 aaKnown RBP3.12□□□□□ -1.91
TRAV39-201ENST00000390466 KAT7O95251 611 aa3.12□□□□□ -1.91
TRAV39-201ENST00000390466 FGF19O95750 216 aa3.12□□□□□ -1.91
TRAV39-201ENST00000390466 PAK4O96013 591 aaPredicted RBP3.12□□□□□ -1.91
TRAV39-201ENST00000390466 CD3DP04234 171 aa3.12□□□□□ -1.91
TRAV39-201ENST00000390466 RPN2P04844 631 aa3.12□□□□□ -1.91
TRAV39-201ENST00000390466 ANXA2P07355 339 aaKnown RBP3.12□□□□□ -1.91
TRAV39-201ENST00000390466 GUSBP08236 651 aa3.12□□□□□ -1.91
TRAV39-201ENST00000390466 ITGA5P08648 1049 aa3.12□□□□□ -1.91
TRAV39-201ENST00000390466 CSF1P09603 554 aa3.12□□□□□ -1.91
TRAV39-201ENST00000390466 GKN3PP0CG01 181 aa3.12□□□□□ -1.91
TRAV39-201ENST00000390466 NPIPA8P0DM63 369 aa3.12□□□□□ -1.91
TRAV39-201ENST00000390466 SMIM10L1P0DMW3 83 aa3.12□□□□□ -1.91
TRAV39-201ENST00000390466 CKBP12277 381 aa3.12□□□□□ -1.91
TRAV39-201ENST00000390466 APEHP13798 732 aaKnown RBP3.12□□□□□ -1.91
TRAV39-201ENST00000390466 NID1P14543 1247 aa3.12□□□□□ -1.91
TRAV39-201ENST00000390466 RPS2P15880 293 aaKnown RBP3.12□□□□□ -1.91
TRAV39-201ENST00000390466 ST6GAL1P15907 406 aa3.12□□□□□ -1.91
TRAV39-201ENST00000390466 EPCAMP16422 314 aa3.12□□□□□ -1.91
TRAV39-201ENST00000390466 ZNF3P17036 446 aa3.12□□□□□ -1.91
TRAV39-201ENST00000390466 IGFBP3P17936 291 aaPredicted RBP3.12□□□□□ -1.91
TRAV39-201ENST00000390466 CSNK2A2P19784 350 aaPredicted RBP3.12□□□□□ -1.91
TRAV39-201ENST00000390466 FSTP19883 344 aa3.12□□□□□ -1.91
TRAV39-201ENST00000390466 HIST1H1TP22492 207 aaPredicted RBP3.12□□□□□ -1.91
TRAV39-201ENST00000390466 EDNRAP25101 427 aa3.12□□□□□ -1.91
TRAV39-201ENST00000390466 CERS1P27544 350 aa3.12□□□□□ -1.91
TRAV39-201ENST00000390466 CD1CP29017 333 aa3.12□□□□□ -1.91
TRAV39-201ENST00000390466 NTSP30990 170 aa3.12□□□□□ -1.91
TRAV39-201ENST00000390466 SLC6A6P31641 620 aa3.12□□□□□ -1.91
TRAV39-201ENST00000390466 OR1D2P34982 312 aa3.12□□□□□ -1.91
TRAV39-201ENST00000390466 THBS4P35443 961 aa3.12□□□□□ -1.91
TRAV39-201ENST00000390466 FAUP35544 74 aaKnown RBP3.12□□□□□ -1.91
TRAV39-201ENST00000390466 DLSTP36957 453 aa3.12□□□□□ -1.91
TRAV39-201ENST00000390466 ACAA2P42765 397 aaKnown RBP3.12□□□□□ -1.91
TRAV39-201ENST00000390466 LPAR6P43657 344 aa3.12□□□□□ -1.91
TRAV39-201ENST00000390466 POU3F4P49335 361 aa3.12□□□□□ -1.91
TRAV39-201ENST00000390466 ANXA11P50995 505 aaKnown RBP3.12□□□□□ -1.91
TRAV39-201ENST00000390466 P2RY4P51582 365 aa3.12□□□□□ -1.91
TRAV39-201ENST00000390466 CAV2P51636 162 aa3.12□□□□□ -1.91
TRAV39-201ENST00000390466 CAPZA1P52907 286 aa3.12□□□□□ -1.91
TRAV39-201ENST00000390466 SLC25A1P53007 311 aa3.12□□□□□ -1.91
TRAV39-201ENST00000390466 EPHB3P54753 998 aa3.12□□□□□ -1.91
TRAV39-201ENST00000390466 PSMD4P55036 377 aaKnown RBP3.12□□□□□ -1.91
TRAV39-201ENST00000390466 F2RL1P55085 397 aa3.12□□□□□ -1.91
TRAV39-201ENST00000390466 GMFBP60983 142 aa3.12□□□□□ -1.91
TRAV39-201ENST00000390466 RAB5BP61020 215 aa3.12□□□□□ -1.91
TRAV39-201ENST00000390466 FOXK1P85037 733 aa3.12□□□□□ -1.91
TRAV39-201ENST00000390466 CAP1Q01518 475 aa3.12□□□□□ -1.91
TRAV39-201ENST00000390466 DPTQ07507 201 aa3.12□□□□□ -1.91
TRAV39-201ENST00000390466 LGALS3BPQ08380 585 aa3.12□□□□□ -1.91
TRAV39-201ENST00000390466 SPEM2Q0P670 501 aa3.12□□□□□ -1.91
TRAV39-201ENST00000390466 MGAT2Q10469 447 aa3.12□□□□□ -1.91
TRAV39-201ENST00000390466 STX4Q12846 297 aa3.12□□□□□ -1.91
TRAV39-201ENST00000390466 PDZK1IP1Q13113 114 aa3.12□□□□□ -1.91
TRAV39-201ENST00000390466 PPP1R1AQ13522 171 aa3.12□□□□□ -1.91
TRAV39-201ENST00000390466 ALKBH1Q13686 389 aaKnown RBP3.12□□□□□ -1.91
TRAV39-201ENST00000390466 IRF4Q15306 451 aa3.12□□□□□ -1.91
TRAV39-201ENST00000390466 ELAVL1Q15717 326 aaKnown RBP3.12□□□□□ -1.91
TRAV39-201ENST00000390466 MLF2Q15773 248 aaPredicted RBP3.12□□□□□ -1.91
TRAV39-201ENST00000390466 SGCAQ16586 387 aa3.12□□□□□ -1.91
TRAV39-201ENST00000390466 PCGF3Q3KNV8 242 aa3.12□□□□□ -1.91
TRAV39-201ENST00000390466 Q3ZCU0 254 aa3.12□□□□□ -1.91
TRAV39-201ENST00000390466 Q499Y3 187 aa3.12□□□□□ -1.91
TRAV39-201ENST00000390466 TMEM35AQ53FP2 167 aa3.12□□□□□ -1.91
TRAV39-201ENST00000390466 PYY3Q5JQD4 70 aa3.12□□□□□ -1.91
TRAV39-201ENST00000390466 SLC35D3Q5M8T2 416 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms