RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 NANPQ8TBE9 248 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 FGF14Q92915 247 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 MYLPFQ96A32 169 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 PINX1Q96BK5 328 aaKnown RBP-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 MED8Q96G25 268 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 ZBED3Q96IU2 234 aaPredicted RBP-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 IGF2BP2-AS1Q96M15 143 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 C12orf66Q96MD2 445 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 TGM7Q96PF1 710 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 EDEM2Q9BV94 578 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 OSBPL10Q9BXB5 764 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 TMEM59Q9BXS4 323 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 GSDMCQ9BYG8 508 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 GCOM2Q9BZD3 368 aaPredicted RBP-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 FGF23Q9GZV9 251 aaPredicted RBP-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 OR52D1Q9H346 318 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 C1orf198Q9H425 327 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 REEP4Q9H6H4 257 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 TMEM231Q9H6L2 316 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 ACTR8Q9H981 624 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 SLC38A10Q9HBR0 1119 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 POPDC2Q9HBU9 364 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 MYOZ1Q9NP98 299 aaPredicted RBP-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 EXOSC4Q9NPD3 245 aaKnown RBP-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 YAE1D1Q9NRH1 226 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 FAM49BQ9NUQ9 324 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 COMMD8Q9NX08 183 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 GIN1Q9NXP7 522 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 C21orf62Q9NYP8 219 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 ZNF492Q9P255 531 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 CGNQ9P2M7 1197 aaKnown RBP-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 NUDCQ9Y266 331 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 TDRKHQ9Y2W6 561 aaKnown RBP-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 YARS2Q9Y2Z4 477 aaKnown RBP-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 HYOU1Q9Y4L1 999 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 MRPS18BQ9Y676 258 aaKnown RBP-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 GBF1Q92538 1859 aa-0.02□□□□□ -2.41
SNORD28-201ENST00000384706 ZNF469Q96JG9 3925 aaPredicted RBP-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 CARMIL1Q5VZK9 1371 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 TRAV6A0A075B6T7 132 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 IGHV1OR15-9A0A0B4J2B8 117 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 TRBV2A0A0J9YWF9 115 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 CCDC182A6NF36 153 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 HIDE1A8MVS5 230 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 ZSCAN12O43309 604 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 CHST10O43529 356 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 RAB3DO95716 219 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 OXSR1O95747 527 aaPredicted RBP-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 LHBP01229 141 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 IGLV3-25P01717 112 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 CXCL10P02778 98 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 ABHD2P08910 425 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 H2BFMP0C1H6 154 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 CT62P0C5K7 136 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 RRASP10301 218 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 CCDC130P13994 396 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 PGCP20142 388 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 GCAP28676 217 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 SSTR5P35346 364 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 HPCAL1P37235 193 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 MPV17P39210 176 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 AQP2P41181 271 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 GPR6P46095 362 aaPredicted RBP-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 TDO2P48775 406 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 ARFIP1P53367 373 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 AP3M2P53677 418 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 SUB1P53999 127 aaKnown RBP eCLIP-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 NAPAP54920 295 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 SLC26A5P58743 744 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 PPP1CBP62140 327 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 ERVK-25P63136 954 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 C2orf54Q08AI8 447 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 SCRN3Q0VDG4 424 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 PRDX4Q13162 271 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 VGLL4Q14135 290 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 MAD2L1BPQ15013 274 aaPredicted RBP-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 PON2Q15165 354 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 SLC9A3R2Q15599 337 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 TRIP10Q15642 601 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 ZNF141Q15928 474 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 PGGHGQ32M88 737 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 SLC25A52Q3SY17 297 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 LINC01620Q4KN68 170 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 ORMDL2Q53FV1 153 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 MPV17L2Q567V2 206 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 LDLRAP1Q5SW96 308 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 TMEM69Q5SWH9 247 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 METTL21CQ5VZV1 264 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 TPGS2Q68CL5 300 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 AMMECR1LQ6DCA0 310 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 OR6B2Q6IFH4 312 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 MED27Q6P2C8 311 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 C11orf88Q6PI97 169 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 TBPL2Q6SJ96 375 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 TMEM179Q6ZVK1 233 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 CENPUQ71F23 418 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 DPY19L4Q7Z388 723 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 HDDC2Q7Z4H3 204 aa-0.03□□□□□ -2.41
SNORD28-201ENST00000384706 SNX20Q7Z614 316 aa-0.03□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms