RNA–Protein interactions for RNA: ENST00000380874.3

FOXC1-201, Transcript of forkhead box C1, humanhuman

APPRIS P1 BASIC

Gene FOXC1, Length 3,926 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC1-201ENST00000380874 EMC7Q9NPA0 242 aa17.71■□□□□ 0.43
FOXC1-201ENST00000380874 FGF21Q9NSA1 209 aa17.71■□□□□ 0.43
FOXC1-201ENST00000380874 FANCMQ8IYD8 2048 aa17.7■□□□□ 0.42
FOXC1-201ENST00000380874 SNTA1Q13424 505 aa17.7■□□□□ 0.42
FOXC1-201ENST00000380874 CCINQ13939 588 aa17.7■□□□□ 0.42
FOXC1-201ENST00000380874 LANCL3Q6ZV70 420 aa17.7■□□□□ 0.42
FOXC1-201ENST00000380874 ATG4DQ86TL0 474 aaPredicted RBP17.7■□□□□ 0.42
FOXC1-201ENST00000380874 PTPMT1Q8WUK0 201 aaPredicted RBP17.7■□□□□ 0.42
FOXC1-201ENST00000380874 GABARAPH6UMI1 98 aa17.7■□□□□ 0.42
FOXC1-201ENST00000380874 TMIGD3P0DMS9 266 aaPredicted RBP17.7■□□□□ 0.42
FOXC1-201ENST00000380874 LIPCP11150 499 aa17.7■□□□□ 0.42
FOXC1-201ENST00000380874 C14orf28Q4W4Y0 310 aa17.7■□□□□ 0.42
FOXC1-201ENST00000380874 ZNF615Q8N8J6 731 aa17.7■□□□□ 0.42
FOXC1-201ENST00000380874 LRRC20Q8TCA0 184 aa17.7■□□□□ 0.42
FOXC1-201ENST00000380874 FRRS1LQ9P0K9 344 aa17.7■□□□□ 0.42
FOXC1-201ENST00000380874 CGGBP1Q9UFW8 167 aaPredicted RBP17.7■□□□□ 0.42
FOXC1-201ENST00000380874 CACNA1EQ15878 2313 aa17.7■□□□□ 0.42
FOXC1-201ENST00000380874 IGKV1D-42A0A075B6H8 117 aa17.7■□□□□ 0.42
FOXC1-201ENST00000380874 TRAV36DV7A0A075B6V5 113 aa17.7■□□□□ 0.42
FOXC1-201ENST00000380874 A0A1B0GVI7 797 aa17.7■□□□□ 0.42
FOXC1-201ENST00000380874 BLACEA4D250 179 aa17.7■□□□□ 0.42
FOXC1-201ENST00000380874 SEC14L5O43304 696 aa17.7■□□□□ 0.42
FOXC1-201ENST00000380874 RAB40ALP0C0E4 278 aa17.7■□□□□ 0.42
FOXC1-201ENST00000380874 CBFBQ13951 182 aa17.7■□□□□ 0.42
FOXC1-201ENST00000380874 ETFDHQ16134 617 aa17.7■□□□□ 0.42
FOXC1-201ENST00000380874 CARD17Q5XLA6 110 aa17.7■□□□□ 0.42
FOXC1-201ENST00000380874 KLHL24Q6TFL4 600 aa17.7■□□□□ 0.42
FOXC1-201ENST00000380874 MAMSTRQ6ZN01 415 aa17.7■□□□□ 0.42
FOXC1-201ENST00000380874 RAB40AQ8WXH6 277 aa17.7■□□□□ 0.42
FOXC1-201ENST00000380874 ATOH1Q92858 354 aaPredicted RBP17.7■□□□□ 0.42
FOXC1-201ENST00000380874 ZNF587Q96SQ5 575 aaPredicted RBP17.7■□□□□ 0.42
FOXC1-201ENST00000380874 NUP210Q8TEM1 1887 aaPredicted RBP17.7■□□□□ 0.42
FOXC1-201ENST00000380874 HEXBP07686 556 aa17.69■□□□□ 0.42
FOXC1-201ENST00000380874 GIMD1P0DJR0 217 aa17.69■□□□□ 0.42
FOXC1-201ENST00000380874 OR3A3P47888 321 aa17.69■□□□□ 0.42
FOXC1-201ENST00000380874 POU3F4P49335 361 aa17.69■□□□□ 0.42
FOXC1-201ENST00000380874 MESTQ5EB52 335 aa17.69■□□□□ 0.42
FOXC1-201ENST00000380874 LRFN5Q96NI6 719 aa17.69■□□□□ 0.42
FOXC1-201ENST00000380874 HIF3AQ9Y2N7 669 aa17.69■□□□□ 0.42
FOXC1-201ENST00000380874 WDR87Q6ZQQ6 2873 aa17.69■□□□□ 0.42
FOXC1-201ENST00000380874 PRSS3P35030 304 aa17.69■□□□□ 0.42
FOXC1-201ENST00000380874 SLC37A1P57057 533 aa17.69■□□□□ 0.42
FOXC1-201ENST00000380874 RASGEF1BQ0VAM2 473 aa17.69■□□□□ 0.42
FOXC1-201ENST00000380874 GSG1Q2KHT4 349 aa17.69■□□□□ 0.42
FOXC1-201ENST00000380874 OR13C3Q8NGS6 347 aa17.69■□□□□ 0.42
FOXC1-201ENST00000380874 KLHDC3Q9BQ90 382 aa17.69■□□□□ 0.42
FOXC1-201ENST00000380874 H0YIG0 161 aa17.69■□□□□ 0.42
FOXC1-201ENST00000380874 ARPC5O15511 151 aa17.69■□□□□ 0.42
FOXC1-201ENST00000380874 GUCA2AQ02747 115 aa17.69■□□□□ 0.42
FOXC1-201ENST00000380874 RIN1Q13671 783 aa17.69■□□□□ 0.42
FOXC1-201ENST00000380874 ELAVL1Q15717 326 aaKnown RBP17.69■□□□□ 0.42
FOXC1-201ENST00000380874 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.69■□□□□ 0.42
FOXC1-201ENST00000380874 GLT8D1Q68CQ7 371 aa17.69■□□□□ 0.42
FOXC1-201ENST00000380874 SLC25A44Q96H78 314 aaPredicted RBP17.69■□□□□ 0.42
FOXC1-201ENST00000380874 ZNF426Q9BUY5 554 aa17.69■□□□□ 0.42
FOXC1-201ENST00000380874 COA3Q9Y2R0 106 aaPredicted RBP17.69■□□□□ 0.42
FOXC1-201ENST00000380874 TMEM212A6NML5 194 aa17.68■□□□□ 0.42
FOXC1-201ENST00000380874 P2RX1P51575 399 aa17.68■□□□□ 0.42
FOXC1-201ENST00000380874 SKP2Q13309 424 aa17.68■□□□□ 0.42
FOXC1-201ENST00000380874 LINC00303Q3SY05 128 aa17.68■□□□□ 0.42
FOXC1-201ENST00000380874 GLB1L2Q8IW92 636 aa17.68■□□□□ 0.42
FOXC1-201ENST00000380874 TEX19Q8NA77 164 aa17.68■□□□□ 0.42
FOXC1-201ENST00000380874 OR52B4Q8NGK2 314 aa17.68■□□□□ 0.42
FOXC1-201ENST00000380874 PHYHIPQ92561 330 aa17.68■□□□□ 0.42
FOXC1-201ENST00000380874 RDH8Q9NYR8 311 aa17.68■□□□□ 0.42
FOXC1-201ENST00000380874 TRAV8-7A0A075B6U6 113 aa17.68■□□□□ 0.42
FOXC1-201ENST00000380874 NME1P15531 152 aaKnown RBP17.68■□□□□ 0.42
FOXC1-201ENST00000380874 POU3F1Q03052 451 aaPredicted RBP17.68■□□□□ 0.42
FOXC1-201ENST00000380874 TOMM20Q15388 145 aa17.68■□□□□ 0.42
FOXC1-201ENST00000380874 FAM69BQ5VUD6 431 aa17.68■□□□□ 0.42
FOXC1-201ENST00000380874 TMPRSS9Q7Z410 1059 aa17.68■□□□□ 0.42
FOXC1-201ENST00000380874 FAM46BQ96A09 425 aa17.68■□□□□ 0.42
FOXC1-201ENST00000380874 MSANTD3Q96H12 275 aa17.68■□□□□ 0.42
FOXC1-201ENST00000380874 ZNF436Q9C0F3 470 aaPredicted RBP17.68■□□□□ 0.42
FOXC1-201ENST00000380874 EMC9Q9Y3B6 208 aa17.68■□□□□ 0.42
FOXC1-201ENST00000380874 RNF215Q9Y6U7 377 aa17.68■□□□□ 0.42
FOXC1-201ENST00000380874 IGHV1OR15-9A0A0B4J2B8 117 aa17.68■□□□□ 0.42
FOXC1-201ENST00000380874 ZSCAN5BA6NJL1 495 aa17.68■□□□□ 0.42
FOXC1-201ENST00000380874 ZNF432O94892 652 aa17.68■□□□□ 0.42
FOXC1-201ENST00000380874 NKPD1Q17RQ9 610 aa17.68■□□□□ 0.42
FOXC1-201ENST00000380874 LRRC37A5PQ49AS3 106 aa17.68■□□□□ 0.42
FOXC1-201ENST00000380874 CORO6Q6QEF8 472 aa17.68■□□□□ 0.42
FOXC1-201ENST00000380874 MDGA2Q7Z553 956 aa17.68■□□□□ 0.42
FOXC1-201ENST00000380874 UBQLN2Q9UHD9 624 aa17.68■□□□□ 0.42
FOXC1-201ENST00000380874 SCP2D1Q9UJQ7 156 aa17.68■□□□□ 0.42
FOXC1-201ENST00000380874 MRPS17Q9Y2R5 130 aaKnown RBP17.68■□□□□ 0.42
FOXC1-201ENST00000380874 A0A1W2PPL8 197 aa17.67■□□□□ 0.42
FOXC1-201ENST00000380874 ERVH48-1M5A8F1 160 aa17.67■□□□□ 0.42
FOXC1-201ENST00000380874 H2BFMP0C1H6 154 aa17.67■□□□□ 0.42
FOXC1-201ENST00000380874 C1orf140Q5VVS0 124 aa17.67■□□□□ 0.42
FOXC1-201ENST00000380874 OR10K2Q6IF99 312 aa17.67■□□□□ 0.42
FOXC1-201ENST00000380874 CCDC28AQ8IWP9 274 aa17.67■□□□□ 0.42
FOXC1-201ENST00000380874 C15orf40Q8WUR7 153 aa17.67■□□□□ 0.42
FOXC1-201ENST00000380874 EMC6Q9BV81 110 aa17.67■□□□□ 0.42
FOXC1-201ENST00000380874 CTSFQ9UBX1 484 aa17.67■□□□□ 0.42
FOXC1-201ENST00000380874 PRR32B1ATL7 298 aa17.67■□□□□ 0.42
FOXC1-201ENST00000380874 LTBRP36941 435 aa17.67■□□□□ 0.42
FOXC1-201ENST00000380874 PRKXP51817 358 aa17.67■□□□□ 0.42
FOXC1-201ENST00000380874 TLE3Q04726 772 aa17.67■□□□□ 0.42
FOXC1-201ENST00000380874 GLO1Q04760 184 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms