RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 GABRR1P24046 479 aa8.56□□□□□ -1.04
PTPRA-204ENST00000380393 DCTDP32321 178 aa8.56□□□□□ -1.04
PTPRA-204ENST00000380393 ADRA1AP35348 466 aa8.56□□□□□ -1.04
PTPRA-204ENST00000380393 CDKN1CP49918 316 aaPredicted RBP8.56□□□□□ -1.04
PTPRA-204ENST00000380393 TNFSF10P50591 281 aa8.56□□□□□ -1.04
PTPRA-204ENST00000380393 CRYBA2P53672 197 aa8.56□□□□□ -1.04
PTPRA-204ENST00000380393 RPS23P62266 143 aaKnown RBP8.56□□□□□ -1.04
PTPRA-204ENST00000380393 RPL19P84098 196 aaKnown RBP8.56□□□□□ -1.04
PTPRA-204ENST00000380393 PRRT3Q5FWE3 981 aa8.56□□□□□ -1.04
PTPRA-204ENST00000380393 LHX8Q68G74 356 aa8.56□□□□□ -1.04
PTPRA-204ENST00000380393 RTL6Q6ICC9 239 aa8.56□□□□□ -1.04
PTPRA-204ENST00000380393 PSAPL1Q6NUJ1 521 aa8.56□□□□□ -1.04
PTPRA-204ENST00000380393 SLC36A1Q7Z2H8 476 aa8.56□□□□□ -1.04
PTPRA-204ENST00000380393 NRSN1Q8IZ57 195 aa8.56□□□□□ -1.04
PTPRA-204ENST00000380393 LRRC52Q8N7C0 313 aa8.56□□□□□ -1.04
PTPRA-204ENST00000380393 OR4L1Q8NH43 312 aa8.56□□□□□ -1.04
PTPRA-204ENST00000380393 PPCDCQ96CD2 204 aa8.56□□□□□ -1.04
PTPRA-204ENST00000380393 SMIM14Q96QK8 99 aa8.56□□□□□ -1.04
PTPRA-204ENST00000380393 TP53RKQ96S44 253 aa8.56□□□□□ -1.04
PTPRA-204ENST00000380393 COMMD4Q9H0A8 199 aa8.56□□□□□ -1.04
PTPRA-204ENST00000380393 RNF39Q9H2S5 420 aa8.56□□□□□ -1.04
PTPRA-204ENST00000380393 TCEAL2Q9H3H9 227 aaPredicted RBP8.56□□□□□ -1.04
PTPRA-204ENST00000380393 BPIFA1Q9NP55 256 aa8.56□□□□□ -1.04
PTPRA-204ENST00000380393 KCNE5Q9UJ90 142 aa8.56□□□□□ -1.04
PTPRA-204ENST00000380393 PRG3Q9Y2Y8 225 aaPredicted RBP8.56□□□□□ -1.04
PTPRA-204ENST00000380393 HDGFL3Q9Y3E1 203 aa8.56□□□□□ -1.04
PTPRA-204ENST00000380393 CHD7Q9P2D1 2997 aa8.56□□□□□ -1.04
PTPRA-204ENST00000380393 DOK2O60496 412 aa8.56□□□□□ -1.04
PTPRA-204ENST00000380393 DNAJB6O75190 326 aa8.56□□□□□ -1.04
PTPRA-204ENST00000380393 TRGC1P0CF51 173 aa8.56□□□□□ -1.04
PTPRA-204ENST00000380393 CHRNB4P30926 498 aa8.56□□□□□ -1.04
PTPRA-204ENST00000380393 MAS1LP35410 378 aa8.56□□□□□ -1.04
PTPRA-204ENST00000380393 RAB1AP62820 205 aa8.56□□□□□ -1.04
PTPRA-204ENST00000380393 SELENOWP63302 87 aa8.56□□□□□ -1.04
PTPRA-204ENST00000380393 NHLH1Q02575 133 aa8.56□□□□□ -1.04
PTPRA-204ENST00000380393 RAB35Q15286 201 aa8.56□□□□□ -1.04
PTPRA-204ENST00000380393 CSRP2Q16527 193 aa8.56□□□□□ -1.04
PTPRA-204ENST00000380393 C4orf17Q53FE4 359 aa8.56□□□□□ -1.04
PTPRA-204ENST00000380393 RPS26P11Q5JNZ5 115 aaPredicted RBP8.56□□□□□ -1.04
PTPRA-204ENST00000380393 EOGTQ5NDL2 527 aa8.56□□□□□ -1.04
PTPRA-204ENST00000380393 C12orf73Q69YU5 71 aa8.56□□□□□ -1.04
PTPRA-204ENST00000380393 ARHGAP12Q8IWW6 846 aa8.56□□□□□ -1.04
PTPRA-204ENST00000380393 JSRP1Q96MG2 331 aaPredicted RBP8.56□□□□□ -1.04
PTPRA-204ENST00000380393 SEPT5Q99719 369 aaPredicted RBP8.56□□□□□ -1.04
PTPRA-204ENST00000380393 UTP23Q9BRU9 249 aaKnown RBP8.56□□□□□ -1.04
PTPRA-204ENST00000380393 WRAP53Q9BUR4 548 aaKnown RBP8.56□□□□□ -1.04
PTPRA-204ENST00000380393 PIN4Q9Y237 131 aaKnown RBP8.56□□□□□ -1.04
PTPRA-204ENST00000380393 ZNF337Q9Y3M9 751 aa8.56□□□□□ -1.04
PTPRA-204ENST00000380393 A0A0B4J2A0 478 aa8.56□□□□□ -1.04
PTPRA-204ENST00000380393 SERTM2A0A1B0GWG4 89 aa8.56□□□□□ -1.04
PTPRA-204ENST00000380393 C17orf102A2RUQ5 167 aa8.56□□□□□ -1.04
PTPRA-204ENST00000380393 MEIS3P2A8K0S8 358 aa8.56□□□□□ -1.04
PTPRA-204ENST00000380393 ATP1B1P05026 303 aa8.56□□□□□ -1.04
PTPRA-204ENST00000380393 ELFN1P0C7U0 828 aa8.56□□□□□ -1.04
PTPRA-204ENST00000380393 RAB40BQ12829 278 aa8.56□□□□□ -1.04
PTPRA-204ENST00000380393 TNFAIP8L2Q6P589 184 aaPredicted RBP8.56□□□□□ -1.04
PTPRA-204ENST00000380393 SLC35E3Q7Z769 313 aa8.56□□□□□ -1.04
PTPRA-204ENST00000380393 LRP11Q86VZ4 500 aa8.56□□□□□ -1.04
PTPRA-204ENST00000380393 LINC01465Q8N7H1 131 aa8.56□□□□□ -1.04
PTPRA-204ENST00000380393 ASB13Q8WXK3 278 aa8.56□□□□□ -1.04
PTPRA-204ENST00000380393 SMARCD2Q92925 531 aa8.56□□□□□ -1.04
PTPRA-204ENST00000380393 PIK3IP1Q96FE7 263 aa8.56□□□□□ -1.04
PTPRA-204ENST00000380393 AARSD1Q9BTE6 412 aaKnown RBP8.56□□□□□ -1.04
PTPRA-204ENST00000380393 G6PC3Q9BUM1 346 aa8.56□□□□□ -1.04
PTPRA-204ENST00000380393 RNF208Q9H0X6 261 aa8.56□□□□□ -1.04
PTPRA-204ENST00000380393 MFSD1Q9H3U5 465 aa8.56□□□□□ -1.04
PTPRA-204ENST00000380393 CWH43Q9H720 699 aa8.56□□□□□ -1.04
PTPRA-204ENST00000380393 EXO5Q9H790 373 aa8.56□□□□□ -1.04
PTPRA-204ENST00000380393 IPPKQ9H8X2 491 aa8.56□□□□□ -1.04
PTPRA-204ENST00000380393 SLC23A2Q9UGH3 650 aa8.56□□□□□ -1.04
PTPRA-204ENST00000380393 IL19Q9UHD0 177 aa8.56□□□□□ -1.04
PTPRA-204ENST00000380393 SHPKQ9UHJ6 478 aa8.56□□□□□ -1.04
PTPRA-204ENST00000380393 SLC7A11Q9UPY5 501 aa8.56□□□□□ -1.04
PTPRA-204ENST00000380393 ATG4BQ9Y4P1 393 aa8.56□□□□□ -1.04
PTPRA-204ENST00000380393 CCDC88CQ9P219 2028 aa8.56□□□□□ -1.04
PTPRA-204ENST00000380393 C5orf42Q9H799 3197 aa8.56□□□□□ -1.04
PTPRA-204ENST00000380393 IRGMA1A4Y4 181 aa8.55□□□□□ -1.04
PTPRA-204ENST00000380393 FAM221AA4D161 298 aa8.55□□□□□ -1.04
PTPRA-204ENST00000380393 CTDSPLO15194 276 aa8.55□□□□□ -1.04
PTPRA-204ENST00000380393 GALTP07902 379 aa8.55□□□□□ -1.04
PTPRA-204ENST00000380393 FAM157CP0CG43 387 aa8.55□□□□□ -1.04
PTPRA-204ENST00000380393 HKR1P10072 659 aa8.55□□□□□ -1.04
PTPRA-204ENST00000380393 ACP2P11117 423 aa8.55□□□□□ -1.04
PTPRA-204ENST00000380393 SCNN1AP37088 669 aa8.55□□□□□ -1.04
PTPRA-204ENST00000380393 CPSF6Q16630 551 aaKnown RBP eCLIP8.55□□□□□ -1.04
PTPRA-204ENST00000380393 NKAIN1Q4KMZ8 207 aa8.55□□□□□ -1.04
PTPRA-204ENST00000380393 COL5A1-AS1Q5SY13 56 aa8.55□□□□□ -1.04
PTPRA-204ENST00000380393 PAQR9Q6ZVX9 377 aa8.55□□□□□ -1.04
PTPRA-204ENST00000380393 AMER3Q8N944 861 aa8.55□□□□□ -1.04
PTPRA-204ENST00000380393 BRIX1Q8TDN6 353 aaKnown RBP8.55□□□□□ -1.04
PTPRA-204ENST00000380393 SPRYD4Q8WW59 207 aaPredicted RBP8.55□□□□□ -1.04
PTPRA-204ENST00000380393 HPSE2Q8WWQ2 592 aa8.55□□□□□ -1.04
PTPRA-204ENST00000380393 FCAMRQ8WWV6 532 aa8.55□□□□□ -1.04
PTPRA-204ENST00000380393 SEC22AQ96IW7 307 aa8.55□□□□□ -1.04
PTPRA-204ENST00000380393 SEMA3CQ99985 751 aa8.55□□□□□ -1.04
PTPRA-204ENST00000380393 TPSD1Q9BZJ3 242 aa8.55□□□□□ -1.04
PTPRA-204ENST00000380393 IL21RQ9HBE5 538 aa8.55□□□□□ -1.04
PTPRA-204ENST00000380393 MSL2Q9HCI7 577 aa8.55□□□□□ -1.04
PTPRA-204ENST00000380393 URGCP-MRPS24S4R325 110 aa8.55□□□□□ -1.04
PTPRA-204ENST00000380393 UMAD1C9J7I0 102 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms