RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 TMPRSS13Q9BYE2 586 aa11.36□□□□□ -0.59
PRPF40B-202ENST00000380281 RSPH9Q9H1X1 276 aaPredicted RBP11.36□□□□□ -0.59
PRPF40B-202ENST00000380281 FAM60AQ9NP50 221 aa11.36□□□□□ -0.59
PRPF40B-202ENST00000380281 ASF1BQ9NVP2 202 aa11.36□□□□□ -0.59
PRPF40B-202ENST00000380281 TAS2R10Q9NYW0 307 aa11.36□□□□□ -0.59
PRPF40B-202ENST00000380281 SDK2Q58EX2 2172 aa11.36□□□□□ -0.59
PRPF40B-202ENST00000380281 TMEM218A2RU14 115 aa11.35□□□□□ -0.59
PRPF40B-202ENST00000380281 PIN1P1O15428 100 aa11.35□□□□□ -0.59
PRPF40B-202ENST00000380281 PRAF2O60831 178 aa11.35□□□□□ -0.59
PRPF40B-202ENST00000380281 CSTAP01040 98 aa11.35□□□□□ -0.59
PRPF40B-202ENST00000380281 HNRNPA1P09651 372 aaKnown RBP eCLIP11.35□□□□□ -0.59
PRPF40B-202ENST00000380281 HOXB2P14652 356 aa11.35□□□□□ -0.59
PRPF40B-202ENST00000380281 HPGDP15428 266 aa11.35□□□□□ -0.59
PRPF40B-202ENST00000380281 LUMP51884 338 aaPredicted RBP11.35□□□□□ -0.59
PRPF40B-202ENST00000380281 ADPRHP54922 357 aa11.35□□□□□ -0.59
PRPF40B-202ENST00000380281 NRG3P56975 720 aa11.35□□□□□ -0.59
PRPF40B-202ENST00000380281 PITPNAQ00169 270 aa11.35□□□□□ -0.59
PRPF40B-202ENST00000380281 SMCO1Q147U7 214 aa11.35□□□□□ -0.59
PRPF40B-202ENST00000380281 ATXN7L3Q14CW9 347 aaPredicted RBP11.35□□□□□ -0.59
PRPF40B-202ENST00000380281 LRRC37A5PQ49AS3 106 aa11.35□□□□□ -0.59
PRPF40B-202ENST00000380281 HACD4Q5VWC8 232 aa11.35□□□□□ -0.59
PRPF40B-202ENST00000380281 CSNK1A1LQ8N752 337 aa11.35□□□□□ -0.59
PRPF40B-202ENST00000380281 AVL9Q8NBF6 648 aa11.35□□□□□ -0.59
PRPF40B-202ENST00000380281 OR51A4Q8NGJ6 313 aa11.35□□□□□ -0.59
PRPF40B-202ENST00000380281 NKD1Q969G9 470 aa11.35□□□□□ -0.59
PRPF40B-202ENST00000380281 SLC25A36Q96CQ1 311 aa11.35□□□□□ -0.59
PRPF40B-202ENST00000380281 KCTD12Q96CX2 325 aaKnown RBP11.35□□□□□ -0.59
PRPF40B-202ENST00000380281 LCORQ96JN0 433 aaPredicted RBP11.35□□□□□ -0.59
PRPF40B-202ENST00000380281 NRSN2Q9GZP1 204 aa11.35□□□□□ -0.59
PRPF40B-202ENST00000380281 ZNF350Q9GZX5 532 aa11.35□□□□□ -0.59
PRPF40B-202ENST00000380281 TLNRD1Q9H1K6 362 aa11.35□□□□□ -0.59
PRPF40B-202ENST00000380281 ZNF275Q9NSD4 429 aaPredicted RBP11.35□□□□□ -0.59
PRPF40B-202ENST00000380281 AKAP7Q9P0M2 348 aaPredicted RBP11.35□□□□□ -0.59
PRPF40B-202ENST00000380281 NCDNQ9UBB6 729 aa11.35□□□□□ -0.59
PRPF40B-202ENST00000380281 PCDHB10Q9UN67 800 aa11.35□□□□□ -0.59
PRPF40B-202ENST00000380281 MOKQ9UQ07 419 aa11.35□□□□□ -0.59
PRPF40B-202ENST00000380281 KIAA1549LQ6ZVL6 1849 aa11.35□□□□□ -0.59
PRPF40B-202ENST00000380281 CXorf51AA0A1B0GTR3 108 aa11.35□□□□□ -0.59
PRPF40B-202ENST00000380281 J3QRE1 110 aa11.35□□□□□ -0.59
PRPF40B-202ENST00000380281 COL9A1P20849 921 aa11.35□□□□□ -0.59
PRPF40B-202ENST00000380281 C5AR1P21730 350 aa11.35□□□□□ -0.59
PRPF40B-202ENST00000380281 S100PP25815 95 aa11.35□□□□□ -0.59
PRPF40B-202ENST00000380281 ARFIP1P53367 373 aa11.35□□□□□ -0.59
PRPF40B-202ENST00000380281 FOXL2P58012 376 aa11.35□□□□□ -0.59
PRPF40B-202ENST00000380281 TMEM196Q5HYL7 178 aa11.35□□□□□ -0.59
PRPF40B-202ENST00000380281 ZNF776Q68DI1 518 aaPredicted RBP11.35□□□□□ -0.59
PRPF40B-202ENST00000380281 DMKNQ6E0U4 476 aaPredicted RBP11.35□□□□□ -0.59
PRPF40B-202ENST00000380281 CDRT4Q8N9R6 151 aa11.35□□□□□ -0.59
PRPF40B-202ENST00000380281 OR6N2Q8NGY6 317 aa11.35□□□□□ -0.59
PRPF40B-202ENST00000380281 SMIM4Q8WVI0 70 aa11.35□□□□□ -0.59
PRPF40B-202ENST00000380281 NR4A3Q92570 626 aa11.35□□□□□ -0.59
PRPF40B-202ENST00000380281 PNPLA2Q96AD5 504 aa11.35□□□□□ -0.59
PRPF40B-202ENST00000380281 SLC25A32Q9H2D1 315 aa11.35□□□□□ -0.59
PRPF40B-202ENST00000380281 TMEM185BQ9H7F4 350 aa11.35□□□□□ -0.59
PRPF40B-202ENST00000380281 TCF7L1Q9HCS4 588 aa11.35□□□□□ -0.59
PRPF40B-202ENST00000380281 C19orf53Q9UNZ5 99 aaPredicted RBP11.35□□□□□ -0.59
PRPF40B-202ENST00000380281 SPACA6W5XKT8 324 aa11.35□□□□□ -0.59
PRPF40B-202ENST00000380281 A0A1B0GV90 55 aa11.34□□□□□ -0.59
PRPF40B-202ENST00000380281 OR6C76A6NM76 312 aa11.34□□□□□ -0.59
PRPF40B-202ENST00000380281 DCTN6O00399 190 aa11.34□□□□□ -0.59
PRPF40B-202ENST00000380281 OR2T1O43869 369 aa11.34□□□□□ -0.59
PRPF40B-202ENST00000380281 ARL6IP5O75915 188 aa11.34□□□□□ -0.59
PRPF40B-202ENST00000380281 KLF8O95600 359 aaPredicted RBP11.34□□□□□ -0.59
PRPF40B-202ENST00000380281 GPR75O95800 540 aa11.34□□□□□ -0.59
PRPF40B-202ENST00000380281 GNRH1P01148 92 aa11.34□□□□□ -0.59
PRPF40B-202ENST00000380281 MPGP29372 298 aa11.34□□□□□ -0.59
PRPF40B-202ENST00000380281 DYRK1AQ13627 763 aa11.34□□□□□ -0.59
PRPF40B-202ENST00000380281 CDK5R1Q15078 307 aa11.34□□□□□ -0.59
PRPF40B-202ENST00000380281 TSC22D1Q15714 1073 aa11.34□□□□□ -0.59
PRPF40B-202ENST00000380281 DMRTC1Q5HYR2 192 aa11.34□□□□□ -0.59
PRPF40B-202ENST00000380281 ZNF626Q68DY1 528 aa11.34□□□□□ -0.59
PRPF40B-202ENST00000380281 FCRL6Q6DN72 434 aa11.34□□□□□ -0.59
PRPF40B-202ENST00000380281 NAA40Q86UY6 237 aa11.34□□□□□ -0.59
PRPF40B-202ENST00000380281 FAM71CQ8NEG0 241 aa11.34□□□□□ -0.59
PRPF40B-202ENST00000380281 RSC1A1Q92681 617 aa11.34□□□□□ -0.59
PRPF40B-202ENST00000380281 CPNE2Q96FN4 548 aaPredicted RBP11.34□□□□□ -0.59
PRPF40B-202ENST00000380281 SERINC2Q96SA4 455 aa11.34□□□□□ -0.59
PRPF40B-202ENST00000380281 PFDN5Q99471 154 aa11.34□□□□□ -0.59
PRPF40B-202ENST00000380281 ZFYVE21Q9BQ24 234 aa11.34□□□□□ -0.59
PRPF40B-202ENST00000380281 TIMM29Q9BSF4 260 aa11.34□□□□□ -0.59
PRPF40B-202ENST00000380281 RASL12Q9NYN1 266 aa11.34□□□□□ -0.59
PRPF40B-202ENST00000380281 LINC01565O15544 149 aa11.34□□□□□ -0.59
PRPF40B-202ENST00000380281 BDKRB2P30411 391 aa11.34□□□□□ -0.59
PRPF40B-202ENST00000380281 PPT1P50897 306 aa11.34□□□□□ -0.59
PRPF40B-202ENST00000380281 GAS6Q14393 721 aa11.34□□□□□ -0.59
PRPF40B-202ENST00000380281 RBM39Q14498 530 aaKnown RBP11.34□□□□□ -0.59
PRPF40B-202ENST00000380281 HABP2Q14520 560 aaPredicted RBP11.34□□□□□ -0.59
PRPF40B-202ENST00000380281 TMEM71Q6P5X7 295 aa11.34□□□□□ -0.59
PRPF40B-202ENST00000380281 TMED4Q7Z7H5 227 aa11.34□□□□□ -0.59
PRPF40B-202ENST00000380281 DMRTC2Q8IXT2 367 aaPredicted RBP11.34□□□□□ -0.59
PRPF40B-202ENST00000380281 RCBTB1Q8NDN9 531 aa11.34□□□□□ -0.59
PRPF40B-202ENST00000380281 TMEM106CQ9BVX2 250 aa11.34□□□□□ -0.59
PRPF40B-202ENST00000380281 DCAF16Q9NXF7 216 aa11.34□□□□□ -0.59
PRPF40B-202ENST00000380281 ST6GALNAC2Q9UJ37 374 aa11.34□□□□□ -0.59
PRPF40B-202ENST00000380281 SLC17A4Q9Y2C5 497 aa11.34□□□□□ -0.59
PRPF40B-202ENST00000380281 KIF26BQ2KJY2 2108 aa11.34□□□□□ -0.59
PRPF40B-202ENST00000380281 A0A1B0GW55 424 aa11.34□□□□□ -0.59
PRPF40B-202ENST00000380281 A0A1W2PPE3 182 aa11.34□□□□□ -0.59
PRPF40B-202ENST00000380281 HMSDA8MTL9 139 aa11.34□□□□□ -0.59
PRPF40B-202ENST00000380281 PYCARD-AS1I3L0S3 204 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms