RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 PIK3IP1Q96FE7 263 aa6.83□□□□□ -1.32
CDKL5-201ENST00000379989 DTD2Q96FN9 168 aa6.83□□□□□ -1.32
CDKL5-201ENST00000379989 FAM210BQ96KR6 192 aa6.83□□□□□ -1.32
CDKL5-201ENST00000379989 ALKBH3Q96Q83 286 aaPredicted RBP6.83□□□□□ -1.32
CDKL5-201ENST00000379989 HIST1H2BLQ99880 126 aa6.83□□□□□ -1.32
CDKL5-201ENST00000379989 ISG20L2Q9H9L3 353 aaKnown RBP6.83□□□□□ -1.32
CDKL5-201ENST00000379989 LPAR3Q9UBY5 353 aa6.83□□□□□ -1.32
CDKL5-201ENST00000379989 CENPFP49454 3210 aa6.83□□□□□ -1.32
CDKL5-201ENST00000379989 PLXNA2O75051 1894 aa6.83□□□□□ -1.32
CDKL5-201ENST00000379989 A0A0G2JN53 185 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 TCRBV21S2A2A0A5A6 115 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 MANBAO00462 879 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 AGPAT2O15120 278 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 OR10H3O60404 316 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 TSPAN2O60636 221 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 ALOX12BO75342 701 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 FBXO24O75426 580 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 FCGR3AP08637 254 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 PTHLHP12272 177 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 TLX1P31314 330 aaPredicted RBP6.82□□□□□ -1.32
CDKL5-201ENST00000379989 CCR4P51679 360 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 SUCLG1P53597 346 aaKnown RBP6.82□□□□□ -1.32
CDKL5-201ENST00000379989 HTRA3P83110 453 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 ADNP2Q6IQ32 1131 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 DRAM2Q6UX65 266 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 LINGO4Q6UY18 593 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 TMPPEQ6ZT21 453 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 UBE3DQ7Z6J8 389 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 TAF8Q7Z7C8 310 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 SIDT2Q8NBJ9 832 aaKnown RBP6.82□□□□□ -1.32
CDKL5-201ENST00000379989 BRIX1Q8TDN6 353 aaKnown RBP6.82□□□□□ -1.32
CDKL5-201ENST00000379989 HPSE2Q8WWQ2 592 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 OIT3Q8WWZ8 545 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 MR1Q95460 341 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 PPCDCQ96CD2 204 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 PPP1R16AQ96I34 528 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 CLUHP3Q96NS8 147 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 SLC12A9Q9BXP2 914 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 LPAR2Q9HBW0 351 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 SEPSECSQ9HD40 501 aaKnown RBP6.82□□□□□ -1.32
CDKL5-201ENST00000379989 POT1Q9NUX5 634 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 ELOVL2Q9NXB9 296 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 SEMA5BQ9P283 1151 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 HDGFL3Q9Y3E1 203 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 TMEM238C9JI98 176 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 F8VVB4 439 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 F8VWA3 439 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 REM1O75628 298 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 IRF1P10914 325 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 HTR2CP28335 458 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 S100A7P31151 101 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 SRSF11Q05519 484 aaKnown RBP6.82□□□□□ -1.32
CDKL5-201ENST00000379989 AKR1C8PQ5T2L2 129 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 TXNDC8Q6A555 127 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 MED27Q6P2C8 311 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 ZNF322Q6U7Q0 402 aaPredicted RBP6.82□□□□□ -1.32
CDKL5-201ENST00000379989 SYT9Q86SS6 491 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 FAM129CQ86XR2 697 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 GID4Q8IVV7 300 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 BAP18Q8IXM2 172 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 POGLUT1Q8NBL1 392 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 NUDT10Q8NFP7 164 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 M1APQ8TC57 530 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 ADGRG7Q96K78 797 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 OR2M4Q96R27 311 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 SLC46A2Q9BY10 475 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 ASB8Q9H765 288 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 FBXW2Q9UKT8 454 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 ZNF346Q9UL40 294 aaKnown RBP6.82□□□□□ -1.32
CDKL5-201ENST00000379989 C1orf226A1L170 272 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 KCNAB3O43448 404 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 TGOLN2O43493 480 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 TSPAN3O60637 253 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 ADAP1O75689 374 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 ASGR2P07307 311 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 TPT1P13693 172 aaKnown RBP6.82□□□□□ -1.32
CDKL5-201ENST00000379989 ELAVL4P26378 380 aaKnown RBP6.82□□□□□ -1.32
CDKL5-201ENST00000379989 SERPINF1P36955 418 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 SLC6A11P48066 632 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 GIPRP48546 466 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 SPINT3P49223 89 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 SGSHP51688 502 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 ST8SIA6P61647 398 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 RPS23P62266 143 aaKnown RBP6.82□□□□□ -1.32
CDKL5-201ENST00000379989 BTG2P78543 158 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 FOXK1P85037 733 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 ZNF234Q14588 700 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 TAF13Q15543 124 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 HENMT1Q5T8I9 393 aaKnown RBP6.82□□□□□ -1.32
CDKL5-201ENST00000379989 GGNBP1Q5YKI7 109 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 SLC36A4Q6YBV0 504 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 C16orf59Q7L2K0 433 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.82□□□□□ -1.32
CDKL5-201ENST00000379989 ZNF573Q86YE8 665 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 ADPRHL1Q8NDY3 354 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 OR4E2Q8NGC2 313 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 LGALS14Q8TCE9 139 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 SMIM8Q96KF7 97 aa6.82□□□□□ -1.32
CDKL5-201ENST00000379989 CNN2Q99439 309 aaKnown RBP6.82□□□□□ -1.32
CDKL5-201ENST00000379989 MICU1Q9BPX6 476 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms