RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 NDC1Q9BTX1 674 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 ACTRT3Q9BYD9 372 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 GSX1Q9H4S2 264 aaPredicted RBP7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 TMED3Q9Y3Q3 217 aa7.79□□□□□ -1.16
NHLRC3-201ENST00000379599 ARID1AO14497 2285 aa7.78□□□□□ -1.16
NHLRC3-201ENST00000379599 LTBP4Q8N2S1 1624 aa7.78□□□□□ -1.16
NHLRC3-201ENST00000379599 TGIF2-C20orf24A0A0A6YYL0 155 aa7.78□□□□□ -1.16
NHLRC3-201ENST00000379599 DHRS7CA6NNS2 312 aa7.78□□□□□ -1.16
NHLRC3-201ENST00000379599 MT-ND5P03915 603 aa7.78□□□□□ -1.16
NHLRC3-201ENST00000379599 EPHA1P21709 976 aa7.78□□□□□ -1.16
NHLRC3-201ENST00000379599 NOVA1P51513 510 aaKnown RBP7.78□□□□□ -1.16
NHLRC3-201ENST00000379599 SMIM11AP58511 58 aa7.78□□□□□ -1.16
NHLRC3-201ENST00000379599 MAP2K5Q13163 448 aa7.78□□□□□ -1.16
NHLRC3-201ENST00000379599 TUSC3Q13454 348 aa7.78□□□□□ -1.16
NHLRC3-201ENST00000379599 NIPAL3Q6P499 406 aa7.78□□□□□ -1.16
NHLRC3-201ENST00000379599 SLC39A5Q6ZMH5 540 aa7.78□□□□□ -1.16
NHLRC3-201ENST00000379599 NLGN1Q8N2Q7 840 aa7.78□□□□□ -1.16
NHLRC3-201ENST00000379599 CLDN19Q8N6F1 224 aa7.78□□□□□ -1.16
NHLRC3-201ENST00000379599 OR1L6Q8NGR2 347 aa7.78□□□□□ -1.16
NHLRC3-201ENST00000379599 CASTOR1Q8WTX7 329 aa7.78□□□□□ -1.16
NHLRC3-201ENST00000379599 FRZBQ92765 325 aa7.78□□□□□ -1.16
NHLRC3-201ENST00000379599 ZBTB8AQ96BR9 441 aa7.78□□□□□ -1.16
NHLRC3-201ENST00000379599 CNN2Q99439 309 aaKnown RBP7.78□□□□□ -1.16
NHLRC3-201ENST00000379599 ADAM19Q9H013 955 aa7.78□□□□□ -1.16
NHLRC3-201ENST00000379599 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.78□□□□□ -1.16
NHLRC3-201ENST00000379599 HS3ST3B1Q9Y662 390 aa7.78□□□□□ -1.16
NHLRC3-201ENST00000379599 CKAP5Q14008 2032 aa7.78□□□□□ -1.16
NHLRC3-201ENST00000379599 FAM171A2A8MVW0 826 aa7.78□□□□□ -1.16
NHLRC3-201ENST00000379599 GPR39O43194 453 aa7.78□□□□□ -1.16
NHLRC3-201ENST00000379599 SOCS5O75159 536 aa7.78□□□□□ -1.16
NHLRC3-201ENST00000379599 ARL6IP5O75915 188 aa7.78□□□□□ -1.16
NHLRC3-201ENST00000379599 SLC2A10O95528 541 aa7.78□□□□□ -1.16
NHLRC3-201ENST00000379599 PPP1R3DO95685 299 aa7.78□□□□□ -1.16
NHLRC3-201ENST00000379599 TGFB1P01137 390 aa7.78□□□□□ -1.16
NHLRC3-201ENST00000379599 HLA-AP01891 365 aaKnown RBP7.78□□□□□ -1.16
NHLRC3-201ENST00000379599 IDH3GP51553 393 aaPredicted RBP7.78□□□□□ -1.16
NHLRC3-201ENST00000379599 SLC37A1P57057 533 aa7.78□□□□□ -1.16
NHLRC3-201ENST00000379599 TAS2R20P59543 309 aa7.78□□□□□ -1.16
NHLRC3-201ENST00000379599 UBE2KP61086 200 aa7.78□□□□□ -1.16
NHLRC3-201ENST00000379599 ACTA2P62736 377 aa7.78□□□□□ -1.16
NHLRC3-201ENST00000379599 ACTG2P63267 376 aa7.78□□□□□ -1.16
NHLRC3-201ENST00000379599 ACTC1P68032 377 aa7.78□□□□□ -1.16
NHLRC3-201ENST00000379599 ACTA1P68133 377 aa7.78□□□□□ -1.16
NHLRC3-201ENST00000379599 HBA1P69905 142 aa7.78□□□□□ -1.16
NHLRC3-201ENST00000379599 PRAMEF8Q5VWM4 474 aa7.78□□□□□ -1.16
NHLRC3-201ENST00000379599 PRAMEF7Q5VXH5 474 aa7.78□□□□□ -1.16
NHLRC3-201ENST00000379599 GRHL2Q6ISB3 625 aa7.78□□□□□ -1.16
NHLRC3-201ENST00000379599 FAM199XQ6PEV8 388 aaPredicted RBP7.78□□□□□ -1.16
NHLRC3-201ENST00000379599 TEX38Q6PEX7 206 aa7.78□□□□□ -1.16
NHLRC3-201ENST00000379599 SLC22A25Q6T423 547 aa7.78□□□□□ -1.16
NHLRC3-201ENST00000379599 Q8WTZ3 238 aa7.78□□□□□ -1.16
NHLRC3-201ENST00000379599 MITD1Q8WV92 249 aa7.78□□□□□ -1.16
NHLRC3-201ENST00000379599 SMIM14Q96QK8 99 aa7.78□□□□□ -1.16
NHLRC3-201ENST00000379599 LMF1Q96S06 567 aa7.78□□□□□ -1.16
NHLRC3-201ENST00000379599 ZNF426Q9BUY5 554 aa7.78□□□□□ -1.16
NHLRC3-201ENST00000379599 GPR87Q9BY21 358 aa7.78□□□□□ -1.16
NHLRC3-201ENST00000379599 GLIS2Q9BZE0 524 aaPredicted RBP7.78□□□□□ -1.16
NHLRC3-201ENST00000379599 NELFAQ9H3P2 528 aa7.78□□□□□ -1.16
NHLRC3-201ENST00000379599 SEPSECSQ9HD40 501 aaKnown RBP7.78□□□□□ -1.16
NHLRC3-201ENST00000379599 CREBZFQ9NS37 354 aa7.78□□□□□ -1.16
NHLRC3-201ENST00000379599 CNIH4Q9P003 139 aa7.78□□□□□ -1.16
NHLRC3-201ENST00000379599 KCNG2Q9UJ96 466 aa7.78□□□□□ -1.16
NHLRC3-201ENST00000379599 PCNTO95613 3336 aa7.78□□□□□ -1.16
NHLRC3-201ENST00000379599 TEX13DA0A0J9YY54 714 aaPredicted RBP7.77□□□□□ -1.16
NHLRC3-201ENST00000379599 TMEM269A0A1B0GVZ9 245 aa7.77□□□□□ -1.16
NHLRC3-201ENST00000379599 SCGB1D1O95968 90 aa7.77□□□□□ -1.16
NHLRC3-201ENST00000379599 GALTP07902 379 aa7.77□□□□□ -1.16
NHLRC3-201ENST00000379599 GIMD1P0DJR0 217 aa7.77□□□□□ -1.16
NHLRC3-201ENST00000379599 MC4RP32245 332 aa7.77□□□□□ -1.16
NHLRC3-201ENST00000379599 RPS15P62841 145 aaKnown RBP7.77□□□□□ -1.16
NHLRC3-201ENST00000379599 RPS26P62854 115 aaKnown RBP7.77□□□□□ -1.16
NHLRC3-201ENST00000379599 ZNF616Q08AN1 781 aa7.77□□□□□ -1.16
NHLRC3-201ENST00000379599 FAHD2BQ6P2I3 314 aaPredicted RBP7.77□□□□□ -1.16
NHLRC3-201ENST00000379599 KIRREL2Q6UWL6 708 aa7.77□□□□□ -1.16
NHLRC3-201ENST00000379599 FRRS1Q6ZNA5 592 aa7.77□□□□□ -1.16
NHLRC3-201ENST00000379599 CHST9Q7L1S5 443 aa7.77□□□□□ -1.16
NHLRC3-201ENST00000379599 GLT6D1Q7Z4J2 308 aa7.77□□□□□ -1.16
NHLRC3-201ENST00000379599 HMGN2P46Q86SG4 172 aa7.77□□□□□ -1.16
NHLRC3-201ENST00000379599 METTL27Q8N6F8 245 aaPredicted RBP7.77□□□□□ -1.16
NHLRC3-201ENST00000379599 MFSD8Q8NHS3 518 aa7.77□□□□□ -1.16
NHLRC3-201ENST00000379599 FAHD2AQ96GK7 314 aa7.77□□□□□ -1.16
NHLRC3-201ENST00000379599 SMIM8Q96KF7 97 aa7.77□□□□□ -1.16
NHLRC3-201ENST00000379599 WRAP53Q9BUR4 548 aaKnown RBP7.77□□□□□ -1.16
NHLRC3-201ENST00000379599 UPB1Q9UBR1 384 aa7.77□□□□□ -1.16
NHLRC3-201ENST00000379599 FOXJ3Q9UPW0 622 aa7.77□□□□□ -1.16
NHLRC3-201ENST00000379599 TTC3P53804 2025 aa7.77□□□□□ -1.17
NHLRC3-201ENST00000379599 A0A087WV62 115 aa7.77□□□□□ -1.17
NHLRC3-201ENST00000379599 TVP23AA6NH52 213 aa7.77□□□□□ -1.17
NHLRC3-201ENST00000379599 CSN2P05814 226 aa7.77□□□□□ -1.17
NHLRC3-201ENST00000379599 ANXA4P09525 319 aaPredicted RBP7.77□□□□□ -1.17
NHLRC3-201ENST00000379599 ITPKBP27987 946 aa7.77□□□□□ -1.17
NHLRC3-201ENST00000379599 TAGLN2P37802 199 aaKnown RBP7.77□□□□□ -1.17
NHLRC3-201ENST00000379599 ACVR1Q04771 509 aa7.77□□□□□ -1.17
NHLRC3-201ENST00000379599 GPNMBQ14956 572 aa7.77□□□□□ -1.17
NHLRC3-201ENST00000379599 GUK1Q16774 197 aa7.77□□□□□ -1.17
NHLRC3-201ENST00000379599 MED27Q6P2C8 311 aa7.77□□□□□ -1.17
NHLRC3-201ENST00000379599 ZNF836Q6ZNA1 936 aa7.77□□□□□ -1.17
NHLRC3-201ENST00000379599 DCXRQ7Z4W1 244 aa7.77□□□□□ -1.17
NHLRC3-201ENST00000379599 GALNT16Q8N428 558 aa7.77□□□□□ -1.17
NHLRC3-201ENST00000379599 SKA2Q8WVK7 121 aaPredicted RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms